RNA–Protein interactions for RNA: ENST00000580751.5

SS18-216, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 4

Gene SS18, Length 547 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-216ENST00000580751 CLEC19AQ6UXS0 136 aa11.93□□□□□ -0.5
SS18-216ENST00000580751 WFDC9Q8NEX5 89 aa11.93□□□□□ -0.5
SS18-216ENST00000580751 TRGV9Q99603 122 aa11.93□□□□□ -0.5
SS18-216ENST00000580751 NPCDR1Q9BY65 106 aa11.93□□□□□ -0.5
SS18-216ENST00000580751 IGHV3-21A0A0B4J1V1 117 aa11.92□□□□□ -0.5
SS18-216ENST00000580751 BMPR1BO00238 502 aa11.92□□□□□ -0.5
SS18-216ENST00000580751 GPR183P32249 361 aa11.92□□□□□ -0.5
SS18-216ENST00000580751 ARL3P36405 182 aa11.92□□□□□ -0.5
SS18-216ENST00000580751 CAMLGP49069 296 aa11.92□□□□□ -0.5
SS18-216ENST00000580751 RND2P52198 227 aa11.92□□□□□ -0.5
SS18-216ENST00000580751 RPEL1Q2QD12 228 aa11.92□□□□□ -0.5
SS18-216ENST00000580751 ACSM6Q6P461 480 aa11.92□□□□□ -0.5
SS18-216ENST00000580751 HSD17B11Q8NBQ5 300 aa11.92□□□□□ -0.5
SS18-216ENST00000580751 NPIPB3Q92617 1050 aa11.92□□□□□ -0.5
SS18-216ENST00000580751 ACY3Q96HD9 319 aa11.92□□□□□ -0.5
SS18-216ENST00000580751 UBQLN2Q9UHD9 624 aa11.92□□□□□ -0.5
SS18-216ENST00000580751 NOTCH1P46531 2555 aa11.92□□□□□ -0.5
SS18-216ENST00000580751 PPP5D1E7EU14 171 aa11.91□□□□□ -0.5
SS18-216ENST00000580751 GGCTO75223 188 aaKnown RBP11.91□□□□□ -0.5
SS18-216ENST00000580751 CLEC3BP05452 202 aa11.91□□□□□ -0.5
SS18-216ENST00000580751 SLURP1P55000 103 aa11.91□□□□□ -0.5
SS18-216ENST00000580751 IFITM2Q01629 132 aa11.91□□□□□ -0.5
SS18-216ENST00000580751 MLANAQ16655 118 aa11.91□□□□□ -0.5
SS18-216ENST00000580751 Q56UQ5 140 aa11.91□□□□□ -0.5
SS18-216ENST00000580751 PXDC1Q5TGL8 231 aa11.91□□□□□ -0.5
SS18-216ENST00000580751 SPSB3Q6PJ21 355 aa11.91□□□□□ -0.5
SS18-216ENST00000580751 DPPA3Q6W0C5 159 aa11.91□□□□□ -0.5
SS18-216ENST00000580751 RNF141Q8WVD5 230 aa11.91□□□□□ -0.5
SS18-216ENST00000580751 RCC1LQ96I51 464 aaKnown RBP11.91□□□□□ -0.5
SS18-216ENST00000580751 MCRIP2Q9BUT9 160 aaKnown RBP11.91□□□□□ -0.5
SS18-216ENST00000580751 SLC25A32Q9H2D1 315 aa11.91□□□□□ -0.5
SS18-216ENST00000580751 ZFP92A6NM28 416 aa11.9□□□□□ -0.5
SS18-216ENST00000580751 AGPAT2O15120 278 aa11.9□□□□□ -0.5
SS18-216ENST00000580751 TGOLN2O43493 480 aa11.9□□□□□ -0.5
SS18-216ENST00000580751 IGLC1P0CG04 106 aa11.9□□□□□ -0.5
SS18-216ENST00000580751 YPEL3P61236 119 aaPredicted RBP11.9□□□□□ -0.5
SS18-216ENST00000580751 PRR20EP86478 221 aa11.9□□□□□ -0.5
SS18-216ENST00000580751 PRR20CP86479 221 aa11.9□□□□□ -0.5
SS18-216ENST00000580751 PRR20DP86480 221 aa11.9□□□□□ -0.5
SS18-216ENST00000580751 PRR20BP86481 221 aa11.9□□□□□ -0.5
SS18-216ENST00000580751 PRR20AP86496 221 aa11.9□□□□□ -0.5
SS18-216ENST00000580751 TMED6Q8WW62 240 aa11.9□□□□□ -0.5
SS18-216ENST00000580751 MGST2Q99735 147 aa11.9□□□□□ -0.5
SS18-216ENST00000580751 GGTLC1Q9BX51 225 aa11.9□□□□□ -0.5
SS18-216ENST00000580751 SLC45A2Q9UMX9 530 aa11.9□□□□□ -0.5
SS18-216ENST00000580751 IGKV1OR2-108A0A075B7D4 117 aa11.89□□□□□ -0.51
SS18-216ENST00000580751 OR2T8A6NH00 312 aa11.89□□□□□ -0.51
SS18-216ENST00000580751 F8W735 103 aaPredicted RBP11.89□□□□□ -0.51
SS18-216ENST00000580751 OVOL1O14753 267 aa11.89□□□□□ -0.51
SS18-216ENST00000580751 GNG7O60262 68 aa11.89□□□□□ -0.51
SS18-216ENST00000580751 OR10J1P30954 320 aa11.89□□□□□ -0.51
SS18-216ENST00000580751 SULT1A2P50226 295 aa11.89□□□□□ -0.51
SS18-216ENST00000580751 KLF5Q13887 457 aaPredicted RBP11.89□□□□□ -0.51
SS18-216ENST00000580751 CYP2G1PQ6ZSU1 146 aa11.89□□□□□ -0.51
SS18-216ENST00000580751 C1QL4Q86Z23 238 aa11.89□□□□□ -0.51
SS18-216ENST00000580751 DLX4Q92988 240 aaPredicted RBP11.89□□□□□ -0.51
SS18-216ENST00000580751 GPR61Q9BZJ8 451 aa11.89□□□□□ -0.51
SS18-216ENST00000580751 IGKV1D-37A0A075B6S9 117 aa11.88□□□□□ -0.51
SS18-216ENST00000580751 NUPL2O15504 423 aaKnown RBP11.88□□□□□ -0.51
SS18-216ENST00000580751 IGHV3-48P01763 117 aa11.88□□□□□ -0.51
SS18-216ENST00000580751 RAB14P61106 215 aa11.88□□□□□ -0.51
SS18-216ENST00000580751 AKR1C8PQ5T2L2 129 aa11.88□□□□□ -0.51
SS18-216ENST00000580751 ALKAL2Q6UX46 152 aa11.88□□□□□ -0.51
SS18-216ENST00000580751 Q6ZRG5 221 aa11.88□□□□□ -0.51
SS18-216ENST00000580751 SAT2Q96F10 170 aaPredicted RBP11.88□□□□□ -0.51
SS18-216ENST00000580751 RSG1Q9BU20 258 aa11.88□□□□□ -0.51
SS18-216ENST00000580751 MRPL36Q9P0J6 103 aaKnown RBP11.88□□□□□ -0.51
SS18-216ENST00000580751 OR2C1O95371 312 aa11.87□□□□□ -0.51
SS18-216ENST00000580751 SYNJ2BPP57105 145 aa11.87□□□□□ -0.51
SS18-216ENST00000580751 PLP1P60201 277 aa11.87□□□□□ -0.51
SS18-216ENST00000580751 ACOT6Q3I5F7 207 aaPredicted RBP11.87□□□□□ -0.51
SS18-216ENST00000580751 FAM106AQ4KMX7 169 aa11.87□□□□□ -0.51
SS18-216ENST00000580751 S100A7AQ86SG5 101 aa11.87□□□□□ -0.51
SS18-216ENST00000580751 GPHB5Q86YW7 130 aa11.87□□□□□ -0.51
SS18-216ENST00000580751 BPIFCQ8NFQ6 507 aa11.87□□□□□ -0.51
SS18-216ENST00000580751 SH3BGRL3Q9H299 93 aa11.87□□□□□ -0.51
SS18-216ENST00000580751 SLC39A9Q9NUM3 307 aa11.87□□□□□ -0.51
SS18-216ENST00000580751 PXMP4Q9Y6I8 212 aa11.87□□□□□ -0.51
SS18-216ENST00000580751 ELOA3CA0A087WX78 387 aaPredicted RBP11.86□□□□□ -0.51
SS18-216ENST00000580751 TOMM40O96008 361 aa11.86□□□□□ -0.51
SS18-216ENST00000580751 IGKV1-17P01599 117 aa11.86□□□□□ -0.51
SS18-216ENST00000580751 CTSGP08311 255 aa11.86□□□□□ -0.51
SS18-216ENST00000580751 M6PRP20645 277 aa11.86□□□□□ -0.51
SS18-216ENST00000580751 S100A7P31151 101 aa11.86□□□□□ -0.51
SS18-216ENST00000580751 ADMP35318 185 aa11.86□□□□□ -0.51
SS18-216ENST00000580751 B2MP61769 119 aa11.86□□□□□ -0.51
SS18-216ENST00000580751 BLOC1S1P78537 153 aa11.86□□□□□ -0.51
SS18-216ENST00000580751 RELQ04864 619 aaPredicted RBP11.86□□□□□ -0.51
SS18-216ENST00000580751 TMEM41BQ5BJD5 291 aa11.86□□□□□ -0.51
SS18-216ENST00000580751 STPG3Q8N7X2 389 aa11.86□□□□□ -0.51
SS18-216ENST00000580751 OR9G4Q8NGQ1 327 aa11.86□□□□□ -0.51
SS18-216ENST00000580751 OR1L4Q8NGR5 311 aa11.86□□□□□ -0.51
SS18-216ENST00000580751 Q8WTZ3 238 aa11.86□□□□□ -0.51
SS18-216ENST00000580751 RNF2Q99496 336 aa11.86□□□□□ -0.51
SS18-216ENST00000580751 ELOVL1Q9BW60 279 aa11.86□□□□□ -0.51
SS18-216ENST00000580751 PEMTQ9UBM1 199 aa11.86□□□□□ -0.51
SS18-216ENST00000580751 RNF24Q9Y225 148 aa11.86□□□□□ -0.51
SS18-216ENST00000580751 SEC14L6B5MCN3 397 aa11.85□□□□□ -0.51
SS18-216ENST00000580751 LGALS9O00182 355 aa11.85□□□□□ -0.51
SS18-216ENST00000580751 LINC00869P0C866 280 aa11.85□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms