RNA–Protein interactions for RNA: ENST00000580541.1

SKA2-205, Transcript of spindle and kinetochore associated complex subunit 2, humanhuman

TSL 3 BASIC

Gene SKA2, Length 689 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA2-205ENST00000580541 CYP2G1PQ6ZSU1 146 aa10.97□□□□□ -0.65
SKA2-205ENST00000580541 NARS2Q96I59 477 aaKnown RBP10.97□□□□□ -0.65
SKA2-205ENST00000580541 ARPC5LQ9BPX5 153 aa10.97□□□□□ -0.65
SKA2-205ENST00000580541 FBXL17Q9UF56 701 aa10.97□□□□□ -0.65
SKA2-205ENST00000580541 RNF24Q9Y225 148 aa10.97□□□□□ -0.65
SKA2-205ENST00000580541 LSM4Q9Y4Z0 139 aaKnown RBP10.97□□□□□ -0.65
SKA2-205ENST00000580541 K7EMT4 169 aa10.96□□□□□ -0.65
SKA2-205ENST00000580541 OVOL1O14753 267 aa10.96□□□□□ -0.65
SKA2-205ENST00000580541 AGPAT2O15120 278 aa10.96□□□□□ -0.65
SKA2-205ENST00000580541 SYNJ2BPP57105 145 aa10.96□□□□□ -0.65
SKA2-205ENST00000580541 HIST2H2BDQ6DRA6 164 aa10.96□□□□□ -0.65
SKA2-205ENST00000580541 REC114Q7Z4M0 266 aa10.96□□□□□ -0.65
SKA2-205ENST00000580541 DUX3Q96PT4 197 aa10.96□□□□□ -0.65
SKA2-205ENST00000580541 MCRIP2Q9BUT9 160 aaKnown RBP10.96□□□□□ -0.65
SKA2-205ENST00000580541 WDR61Q9GZS3 305 aaKnown RBP10.96□□□□□ -0.65
SKA2-205ENST00000580541 ARL6Q9H0F7 186 aa10.96□□□□□ -0.65
SKA2-205ENST00000580541 PLA2G2EQ9NZK7 142 aa10.96□□□□□ -0.65
SKA2-205ENST00000580541 PUS1Q9Y606 427 aaKnown RBP eCLIP10.96□□□□□ -0.65
SKA2-205ENST00000580541 STAB1Q9NY15 2570 aa10.95□□□□□ -0.66
SKA2-205ENST00000580541 IGKV1D-37A0A075B6S9 117 aa10.95□□□□□ -0.66
SKA2-205ENST00000580541 IGKV1OR2-108A0A075B7D4 117 aa10.95□□□□□ -0.66
SKA2-205ENST00000580541 IGHV3-35A0A0C4DH35 117 aa10.95□□□□□ -0.66
SKA2-205ENST00000580541 PSG1P11464 419 aa10.95□□□□□ -0.66
SKA2-205ENST00000580541 CD33P20138 364 aa10.95□□□□□ -0.66
SKA2-205ENST00000580541 NPPCP23582 126 aa10.95□□□□□ -0.66
SKA2-205ENST00000580541 RPL29P47914 159 aaKnown RBP10.95□□□□□ -0.66
SKA2-205ENST00000580541 SLURP1P55000 103 aa10.95□□□□□ -0.66
SKA2-205ENST00000580541 ZNF90Q03938 601 aa10.95□□□□□ -0.66
SKA2-205ENST00000580541 TOMM20LQ6UXN7 152 aa10.95□□□□□ -0.66
SKA2-205ENST00000580541 TMUB2Q71RG4 321 aa10.95□□□□□ -0.66
SKA2-205ENST00000580541 OR9G4Q8NGQ1 327 aa10.95□□□□□ -0.66
SKA2-205ENST00000580541 DLX4Q92988 240 aaPredicted RBP10.95□□□□□ -0.66
SKA2-205ENST00000580541 MARC2Q969Z3 335 aa10.95□□□□□ -0.66
SKA2-205ENST00000580541 PPP1R14BQ96C90 147 aa10.95□□□□□ -0.66
SKA2-205ENST00000580541 GNPNAT1Q96EK6 184 aaPredicted RBP10.95□□□□□ -0.66
SKA2-205ENST00000580541 METTL26Q96S19 204 aa10.95□□□□□ -0.66
SKA2-205ENST00000580541 C20orf24Q9BUV8 137 aa10.95□□□□□ -0.66
SKA2-205ENST00000580541 DAZ1Q9NQZ3 744 aaKnown RBP10.95□□□□□ -0.66
SKA2-205ENST00000580541 A0A1W2PS18 150 aa10.94□□□□□ -0.66
SKA2-205ENST00000580541 IL4P05112 153 aa10.94□□□□□ -0.66
SKA2-205ENST00000580541 TMEM190Q8WZ59 177 aa10.94□□□□□ -0.66
SKA2-205ENST00000580541 NPCDR1Q9BY65 106 aa10.94□□□□□ -0.66
SKA2-205ENST00000580541 GPR61Q9BZJ8 451 aa10.94□□□□□ -0.66
SKA2-205ENST00000580541 TMEM231Q9H6L2 316 aa10.94□□□□□ -0.66
SKA2-205ENST00000580541 SLC45A2Q9UMX9 530 aa10.94□□□□□ -0.66
SKA2-205ENST00000580541 ELOA3CA0A087WX78 387 aaPredicted RBP10.93□□□□□ -0.66
SKA2-205ENST00000580541 BCL2L11O43521 198 aa10.93□□□□□ -0.66
SKA2-205ENST00000580541 CXCL2P19875 107 aa10.93□□□□□ -0.66
SKA2-205ENST00000580541 LGALSLQ3ZCW2 172 aaPredicted RBP10.93□□□□□ -0.66
SKA2-205ENST00000580541 LINC00482Q8N8I6 264 aa10.93□□□□□ -0.66
SKA2-205ENST00000580541 WFDC9Q8NEX5 89 aa10.93□□□□□ -0.66
SKA2-205ENST00000580541 OR1L4Q8NGR5 311 aa10.93□□□□□ -0.66
SKA2-205ENST00000580541 RNF125Q96EQ8 232 aa10.93□□□□□ -0.66
SKA2-205ENST00000580541 MGST2Q99735 147 aa10.93□□□□□ -0.66
SKA2-205ENST00000580541 WFDC1Q9HC57 220 aa10.93□□□□□ -0.66
SKA2-205ENST00000580541 MRPL27Q9P0M9 148 aaKnown RBP10.93□□□□□ -0.66
SKA2-205ENST00000580541 RABAC1Q9UI14 185 aa10.93□□□□□ -0.66
SKA2-205ENST00000580541 TIMM9Q9Y5J7 89 aa10.93□□□□□ -0.66
SKA2-205ENST00000580541 TENM1Q9UKZ4 2725 aa10.92□□□□□ -0.66
SKA2-205ENST00000580541 WI2-2373I1.2A0A1W2PRP0 233 aa10.92□□□□□ -0.66
SKA2-205ENST00000580541 A8MWP6 167 aa10.92□□□□□ -0.66
SKA2-205ENST00000580541 HYPMO75409 117 aa10.92□□□□□ -0.66
SKA2-205ENST00000580541 TSPAN15O95858 294 aa10.92□□□□□ -0.66
SKA2-205ENST00000580541 CD5P06127 495 aa10.92□□□□□ -0.66
SKA2-205ENST00000580541 LINC00869P0C866 280 aa10.92□□□□□ -0.66
SKA2-205ENST00000580541 INSL3P51460 131 aa10.92□□□□□ -0.66
SKA2-205ENST00000580541 PLP1P60201 277 aa10.92□□□□□ -0.66
SKA2-205ENST00000580541 LYZP61626 148 aa10.92□□□□□ -0.66
SKA2-205ENST00000580541 B2MP61769 119 aa10.92□□□□□ -0.66
SKA2-205ENST00000580541 SERF2P84101 59 aa10.92□□□□□ -0.66
SKA2-205ENST00000580541 CD300CQ08708 224 aa10.92□□□□□ -0.66
SKA2-205ENST00000580541 OPCMLQ14982 345 aa10.92□□□□□ -0.66
SKA2-205ENST00000580541 EIF5AL1Q6IS14 154 aaKnown RBP10.92□□□□□ -0.66
SKA2-205ENST00000580541 GRAMD2BQ96HH9 432 aa10.92□□□□□ -0.66
SKA2-205ENST00000580541 RCC1LQ96I51 464 aaKnown RBP10.92□□□□□ -0.66
SKA2-205ENST00000580541 PFDN5Q99471 154 aa10.92□□□□□ -0.66
SKA2-205ENST00000580541 PBDC1Q9BVG4 233 aa10.92□□□□□ -0.66
SKA2-205ENST00000580541 GGTLC1Q9BX51 225 aa10.92□□□□□ -0.66
SKA2-205ENST00000580541 ZNF471Q9BX82 626 aaPredicted RBP10.92□□□□□ -0.66
SKA2-205ENST00000580541 SLC39A9Q9NUM3 307 aa10.92□□□□□ -0.66
SKA2-205ENST00000580541 SIGLEC8Q9NYZ4 499 aa10.92□□□□□ -0.66
SKA2-205ENST00000580541 MBP02144 154 aa10.91□□□□□ -0.66
SKA2-205ENST00000580541 HNRNPCP07910 306 aaKnown RBP eCLIP10.91□□□□□ -0.66
SKA2-205ENST00000580541 ORM2P19652 201 aa10.91□□□□□ -0.66
SKA2-205ENST00000580541 PRR31Q5SQ13 230 aa10.91□□□□□ -0.66
SKA2-205ENST00000580541 RPL7L1Q6DKI1 246 aaKnown RBP10.91□□□□□ -0.66
SKA2-205ENST00000580541 UNQ9165/PRO28630Q6UXU0 137 aa10.91□□□□□ -0.66
SKA2-205ENST00000580541 STPG3Q8N7X2 389 aa10.91□□□□□ -0.66
SKA2-205ENST00000580541 OR1B1Q8NGR6 318 aa10.91□□□□□ -0.66
SKA2-205ENST00000580541 PSMG3Q9BT73 122 aaPredicted RBP10.91□□□□□ -0.66
SKA2-205ENST00000580541 DNAJC4Q9NNZ3 241 aa10.91□□□□□ -0.66
SKA2-205ENST00000580541 PXMP4Q9Y6I8 212 aa10.91□□□□□ -0.66
SKA2-205ENST00000580541 C2orf70A6NJV1 201 aa10.9□□□□□ -0.66
SKA2-205ENST00000580541 COX7A2P2O60397 106 aa10.9□□□□□ -0.66
SKA2-205ENST00000580541 OR5G3P0C626 314 aa10.9□□□□□ -0.66
SKA2-205ENST00000580541 CBLN1P23435 193 aa10.9□□□□□ -0.66
SKA2-205ENST00000580541 CRYBB3P26998 211 aa10.9□□□□□ -0.66
SKA2-205ENST00000580541 PRR20EP86478 221 aa10.9□□□□□ -0.66
SKA2-205ENST00000580541 PRR20CP86479 221 aa10.9□□□□□ -0.66
SKA2-205ENST00000580541 PRR20DP86480 221 aa10.9□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 120.3 ms