RNA–Protein interactions for RNA: ENST00000578595.1

SS18-209, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 3

Gene SS18, Length 406 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-209ENST00000578595 L7N2F9 121 aa14.54□□□□□ -0.08
SS18-209ENST00000578595 RBMY1DP0C7P1 496 aaKnown RBP14.54□□□□□ -0.08
SS18-209ENST00000578595 CRYBB3P26998 211 aa14.54□□□□□ -0.08
SS18-209ENST00000578595 EIF2B2P49770 351 aaKnown RBP14.54□□□□□ -0.08
SS18-209ENST00000578595 LYZP61626 148 aa14.54□□□□□ -0.08
SS18-209ENST00000578595 VAMP2P63027 116 aa14.54□□□□□ -0.08
SS18-209ENST00000578595 OR2F1Q13607 317 aa14.54□□□□□ -0.08
SS18-209ENST00000578595 USF2Q15853 346 aaPredicted RBP14.54□□□□□ -0.08
SS18-209ENST00000578595 ODF3L2Q3SX64 289 aa14.54□□□□□ -0.08
SS18-209ENST00000578595 ACOT7LQ6ZUV0 252 aa14.54□□□□□ -0.08
SS18-209ENST00000578595 OR51G1Q8NGK1 321 aa14.54□□□□□ -0.08
SS18-209ENST00000578595 RNF125Q96EQ8 232 aa14.54□□□□□ -0.08
SS18-209ENST00000578595 TM2D3Q9BRN9 247 aa14.54□□□□□ -0.08
SS18-209ENST00000578595 GPN1Q9HCN4 374 aaPredicted RBP14.54□□□□□ -0.08
SS18-209ENST00000578595 RETNQ9HD89 108 aa14.54□□□□□ -0.08
SS18-209ENST00000578595 RCL1Q9Y2P8 373 aaKnown RBP14.54□□□□□ -0.08
SS18-209ENST00000578595 LOC102724200A0A096LPH7 203 aaPredicted RBP14.53□□□□□ -0.08
SS18-209ENST00000578595 IFITM3Q01628 133 aa14.53□□□□□ -0.08
SS18-209ENST00000578595 ZNF90Q03938 601 aa14.53□□□□□ -0.08
SS18-209ENST00000578595 LILRB2Q8N423 598 aa14.53□□□□□ -0.08
SS18-209ENST00000578595 PPP1R14BQ96C90 147 aa14.53□□□□□ -0.08
SS18-209ENST00000578595 RAB40CQ96S21 281 aa14.53□□□□□ -0.08
SS18-209ENST00000578595 GGTLC1Q9BX51 225 aa14.53□□□□□ -0.08
SS18-209ENST00000578595 MS4A6AQ9H2W1 248 aa14.53□□□□□ -0.08
SS18-209ENST00000578595 METTL15P1P0C7V9 234 aa14.52□□□□□ -0.09
SS18-209ENST00000578595 S100A10P60903 97 aa14.52□□□□□ -0.09
SS18-209ENST00000578595 RRAS2P62070 204 aaPredicted RBP14.52□□□□□ -0.09
SS18-209ENST00000578595 FAM90A2PQ658T7 463 aa14.52□□□□□ -0.09
SS18-209ENST00000578595 GSG1LQ6UXU4 331 aa14.52□□□□□ -0.09
SS18-209ENST00000578595 NRARPQ7Z6K4 114 aa14.52□□□□□ -0.09
SS18-209ENST00000578595 APRG1Q8IVJ8 170 aa14.52□□□□□ -0.09
SS18-209ENST00000578595 SMIM8Q96KF7 97 aa14.52□□□□□ -0.09
SS18-209ENST00000578595 FAM110AQ9BQ89 295 aa14.52□□□□□ -0.09
SS18-209ENST00000578595 NBEAL2Q6ZNJ1 2754 aa14.52□□□□□ -0.09
SS18-209ENST00000578595 MBPP02686 304 aaPredicted RBP14.51□□□□□ -0.09
SS18-209ENST00000578595 RPL35AP18077 110 aaKnown RBP14.51□□□□□ -0.09
SS18-209ENST00000578595 CITED4Q96RK1 184 aa14.51□□□□□ -0.09
SS18-209ENST00000578595 PFDN2Q9UHV9 154 aa14.51□□□□□ -0.09
SS18-209ENST00000578595 IGKV1D-37A0A075B6S9 117 aa14.5□□□□□ -0.09
SS18-209ENST00000578595 HELTA6NFD8 242 aa14.5□□□□□ -0.09
SS18-209ENST00000578595 IL5P05113 134 aa14.5□□□□□ -0.09
SS18-209ENST00000578595 BCAP31P51572 246 aa14.5□□□□□ -0.09
SS18-209ENST00000578595 CMC4P56277 68 aaPredicted RBP14.5□□□□□ -0.09
SS18-209ENST00000578595 TRGV9Q99603 122 aa14.5□□□□□ -0.09
SS18-209ENST00000578595 MAP6D1Q9H9H5 199 aa14.5□□□□□ -0.09
SS18-209ENST00000578595 MGAT4CQ9UBM8 478 aa14.5□□□□□ -0.09
SS18-209ENST00000578595 AGRNO00468 2067 aa14.5□□□□□ -0.09
SS18-209ENST00000578595 SNRPGP15A8MWD9 76 aa14.49□□□□□ -0.09
SS18-209ENST00000578595 PRSS46E5RG02 174 aa14.49□□□□□ -0.09
SS18-209ENST00000578595 INMT-MINDY4F8WBC2 141 aa14.49□□□□□ -0.09
SS18-209ENST00000578595 TSC22D2O75157 780 aa14.49□□□□□ -0.09
SS18-209ENST00000578595 CCNKO75909 580 aa14.49□□□□□ -0.09
SS18-209ENST00000578595 NUP62P37198 522 aaPredicted RBP14.49□□□□□ -0.09
SS18-209ENST00000578595 ZNF124Q15973 351 aa14.49□□□□□ -0.09
SS18-209ENST00000578595 LINC00322Q6ZN03 302 aaPredicted RBP14.49□□□□□ -0.09
SS18-209ENST00000578595 OR10P1Q8NGE3 313 aa14.49□□□□□ -0.09
SS18-209ENST00000578595 C2orf50Q96LR7 162 aa14.49□□□□□ -0.09
SS18-209ENST00000578595 HUWE1Q7Z6Z7 4374 aaKnown RBP14.48□□□□□ -0.09
SS18-209ENST00000578595 PVALBP20472 110 aaPredicted RBP14.48□□□□□ -0.09
SS18-209ENST00000578595 CAV2P51636 162 aa14.48□□□□□ -0.09
SS18-209ENST00000578595 APOC4P55056 127 aa14.48□□□□□ -0.09
SS18-209ENST00000578595 DEFB131AP59861 70 aa14.48□□□□□ -0.09
SS18-209ENST00000578595 C16orf54Q6UWD8 224 aa14.48□□□□□ -0.09
SS18-209ENST00000578595 THAP8Q8NA92 274 aa14.48□□□□□ -0.09
SS18-209ENST00000578595 BPIFCQ8NFQ6 507 aa14.48□□□□□ -0.09
SS18-209ENST00000578595 IGKV1OR2-108A0A075B7D4 117 aa14.47□□□□□ -0.09
SS18-209ENST00000578595 C7orf66A4D0T2 115 aa14.47□□□□□ -0.09
SS18-209ENST00000578595 K7EPK0 472 aa14.47□□□□□ -0.09
SS18-209ENST00000578595 GOSR2O14653 212 aa14.47□□□□□ -0.09
SS18-209ENST00000578595 PRAF2O60831 178 aa14.47□□□□□ -0.09
SS18-209ENST00000578595 PAX9P55771 341 aa14.47□□□□□ -0.09
SS18-209ENST00000578595 TAS2R30P59541 319 aa14.47□□□□□ -0.09
SS18-209ENST00000578595 LEMD1Q68G75 181 aa14.47□□□□□ -0.09
SS18-209ENST00000578595 TMEM14EPQ6UXP3 125 aa14.47□□□□□ -0.09
SS18-209ENST00000578595 SIGLEC15Q6ZMC9 328 aa14.47□□□□□ -0.09
SS18-209ENST00000578595 GLMPQ8WWB7 406 aa14.47□□□□□ -0.09
SS18-209ENST00000578595 ZNF688P0C7X2 276 aa14.46□□□□□ -0.09
SS18-209ENST00000578595 GATA2P23769 480 aaPredicted RBP14.46□□□□□ -0.09
SS18-209ENST00000578595 AP2S1P53680 142 aaPredicted RBP14.46□□□□□ -0.09
SS18-209ENST00000578595 DLK1P80370 383 aa14.46□□□□□ -0.09
SS18-209ENST00000578595 U3KQE9 123 aa14.46□□□□□ -0.09
SS18-209ENST00000578595 TRAV2A0A0B4J234 112 aa14.45□□□□□ -0.1
SS18-209ENST00000578595 TMEM144Q7Z5S9 345 aa14.45□□□□□ -0.1
SS18-209ENST00000578595 FAM24BQ8N5W8 94 aa14.45□□□□□ -0.1
SS18-209ENST00000578595 STPG3Q8N7X2 389 aa14.45□□□□□ -0.1
SS18-209ENST00000578595 DOK5Q9P104 306 aa14.45□□□□□ -0.1
SS18-209ENST00000578595 PMS2P5A8MQ11 134 aa14.44□□□□□ -0.1
SS18-209ENST00000578595 K7EQG2 157 aa14.44□□□□□ -0.1
SS18-209ENST00000578595 BUB3O43684 328 aa14.44□□□□□ -0.1
SS18-209ENST00000578595 SSNA1O43805 119 aa14.44□□□□□ -0.1
SS18-209ENST00000578595 SIX6O95475 246 aa14.44□□□□□ -0.1
SS18-209ENST00000578595 CFDP00746 253 aaPredicted RBP14.44□□□□□ -0.1
SS18-209ENST00000578595 ORM2P19652 201 aa14.44□□□□□ -0.1
SS18-209ENST00000578595 RAB32Q13637 225 aa14.44□□□□□ -0.1
SS18-209ENST00000578595 DEFB135Q30KP9 77 aa14.44□□□□□ -0.1
SS18-209ENST00000578595 OR1B1Q8NGR6 318 aa14.44□□□□□ -0.1
SS18-209ENST00000578595 SLC25A22Q9H936 323 aa14.44□□□□□ -0.1
SS18-209ENST00000578595 SLC38A11Q08AI6 406 aa14.43□□□□□ -0.1
SS18-209ENST00000578595 CYP2G1PQ6ZSU1 146 aa14.43□□□□□ -0.1
SS18-209ENST00000578595 OR8I2Q8N0Y5 310 aa14.43□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms