RNA–Protein interactions for RNA: ENST00000578469.1

SREBF1-218, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 3

Gene SREBF1, Length 588 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-218ENST00000578469 GUCA2BQ16661 112 aa13.32□□□□□ -0.28
SREBF1-218ENST00000578469 ECSCRQ19T08 205 aa13.32□□□□□ -0.28
SREBF1-218ENST00000578469 AKIRIN2Q53H80 203 aa13.32□□□□□ -0.28
SREBF1-218ENST00000578469 C10orf113Q5VZT2 155 aa13.32□□□□□ -0.28
SREBF1-218ENST00000578469 MIR17HGQ75NE6 70 aa13.32□□□□□ -0.28
SREBF1-218ENST00000578469 FANCD2OSQ96PS1 177 aa13.32□□□□□ -0.28
SREBF1-218ENST00000578469 FSHBP01225 129 aa13.31□□□□□ -0.28
SREBF1-218ENST00000578469 IGLC1P0CG04 106 aa13.31□□□□□ -0.28
SREBF1-218ENST00000578469 C8orf88P0DMB2 117 aa13.31□□□□□ -0.28
SREBF1-218ENST00000578469 GCHFRP30047 84 aa13.31□□□□□ -0.28
SREBF1-218ENST00000578469 CEBPGP53567 150 aa13.31□□□□□ -0.28
SREBF1-218ENST00000578469 MEF2BQ02080 365 aaPredicted RBP13.31□□□□□ -0.28
SREBF1-218ENST00000578469 SPATA31B1PQ5VZV4 182 aa13.31□□□□□ -0.28
SREBF1-218ENST00000578469 PQLC2Q6ZP29 291 aa13.31□□□□□ -0.28
SREBF1-218ENST00000578469 ZNF48Q96MX3 618 aaPredicted RBP13.31□□□□□ -0.28
SREBF1-218ENST00000578469 TXNDC17Q9BRA2 123 aa13.31□□□□□ -0.28
SREBF1-218ENST00000578469 NKX6-2Q9C056 277 aaPredicted RBP13.31□□□□□ -0.28
SREBF1-218ENST00000578469 TMEM167BQ9NRX6 74 aa13.31□□□□□ -0.28
SREBF1-218ENST00000578469 PAGE4O60829 102 aa13.3□□□□□ -0.28
SREBF1-218ENST00000578469 SCO1O75880 301 aa13.3□□□□□ -0.28
SREBF1-218ENST00000578469 DEFB112Q30KQ8 113 aa13.3□□□□□ -0.28
SREBF1-218ENST00000578469 C9orf152Q5JTZ5 239 aa13.3□□□□□ -0.28
SREBF1-218ENST00000578469 C9orf139Q6ZV77 190 aa13.3□□□□□ -0.28
SREBF1-218ENST00000578469 VN1R17PQ8TDU5 208 aa13.3□□□□□ -0.28
SREBF1-218ENST00000578469 TMEM37Q8WXS4 190 aa13.3□□□□□ -0.28
SREBF1-218ENST00000578469 ZNF355PQ9NSJ1 428 aa13.3□□□□□ -0.28
SREBF1-218ENST00000578469 C21orf62Q9NYP8 219 aa13.3□□□□□ -0.28
SREBF1-218ENST00000578469 DOK5Q9P104 306 aa13.3□□□□□ -0.28
SREBF1-218ENST00000578469 FBXL7Q9UJT9 491 aa13.3□□□□□ -0.28
SREBF1-218ENST00000578469 PSMB11A5LHX3 300 aa13.29□□□□□ -0.28
SREBF1-218ENST00000578469 SH2D7A6NKC9 451 aaPredicted RBP13.29□□□□□ -0.28
SREBF1-218ENST00000578469 GNG7O60262 68 aa13.29□□□□□ -0.28
SREBF1-218ENST00000578469 HYPMO75409 117 aa13.29□□□□□ -0.28
SREBF1-218ENST00000578469 OR2J3O76001 311 aa13.29□□□□□ -0.28
SREBF1-218ENST00000578469 AMY1AP04745 511 aa13.29□□□□□ -0.28
SREBF1-218ENST00000578469 CRIP2P52943 208 aaPredicted RBP13.29□□□□□ -0.28
SREBF1-218ENST00000578469 PLP1P60201 277 aa13.29□□□□□ -0.28
SREBF1-218ENST00000578469 KLK9Q2XQG4 91 aa13.29□□□□□ -0.28
SREBF1-218ENST00000578469 TIGITQ495A1 244 aa13.29□□□□□ -0.28
SREBF1-218ENST00000578469 Q56UQ5 140 aa13.29□□□□□ -0.28
SREBF1-218ENST00000578469 CYB561D1Q8N8Q1 229 aa13.29□□□□□ -0.28
SREBF1-218ENST00000578469 OR5R1Q8NH85 324 aa13.29□□□□□ -0.28
SREBF1-218ENST00000578469 SUN5Q8TC36 379 aa13.29□□□□□ -0.28
SREBF1-218ENST00000578469 TXN2Q99757 166 aa13.29□□□□□ -0.28
SREBF1-218ENST00000578469 KLK9Q9UKQ9 250 aa13.29□□□□□ -0.28
SREBF1-218ENST00000578469 TRAV41A0A0B4J266 112 aa13.28□□□□□ -0.28
SREBF1-218ENST00000578469 TMEM250H0YL14 139 aa13.28□□□□□ -0.28
SREBF1-218ENST00000578469 NDUFB8O95169 186 aa13.28□□□□□ -0.28
SREBF1-218ENST00000578469 RD3LP0DJH9 198 aa13.28□□□□□ -0.28
SREBF1-218ENST00000578469 ORM2P19652 201 aa13.28□□□□□ -0.28
SREBF1-218ENST00000578469 CST9LP1Q5W188 147 aa13.28□□□□□ -0.28
SREBF1-218ENST00000578469 BCL6BQ8N143 479 aaPredicted RBP13.28□□□□□ -0.28
SREBF1-218ENST00000578469 CLRN3Q8NCR9 226 aa13.28□□□□□ -0.28
SREBF1-218ENST00000578469 OR1B1Q8NGR6 318 aa13.28□□□□□ -0.28
SREBF1-218ENST00000578469 OR4F5Q8NH21 305 aa13.28□□□□□ -0.28
SREBF1-218ENST00000578469 OR4F4Q96R69 305 aa13.28□□□□□ -0.28
SREBF1-218ENST00000578469 MDFIC2A0A1B0GVS7 189 aa13.27□□□□□ -0.29
SREBF1-218ENST00000578469 C11orf94C9JXX5 98 aa13.27□□□□□ -0.29
SREBF1-218ENST00000578469 PDE6DO43924 150 aa13.27□□□□□ -0.29
SREBF1-218ENST00000578469 OR7C2O60412 319 aa13.27□□□□□ -0.29
SREBF1-218ENST00000578469 PSG1P11464 419 aa13.27□□□□□ -0.29
SREBF1-218ENST00000578469 CD81P60033 236 aa13.27□□□□□ -0.29
SREBF1-218ENST00000578469 UBE2G2P60604 165 aa13.27□□□□□ -0.29
SREBF1-218ENST00000578469 YPEL3P61236 119 aaPredicted RBP13.27□□□□□ -0.29
SREBF1-218ENST00000578469 ATRAIDQ6UW56 229 aa13.27□□□□□ -0.29
SREBF1-218ENST00000578469 PATE2Q6UY27 113 aa13.27□□□□□ -0.29
SREBF1-218ENST00000578469 S100A7AQ86SG5 101 aa13.27□□□□□ -0.29
SREBF1-218ENST00000578469 STXBP6Q8NFX7 210 aa13.27□□□□□ -0.29
SREBF1-218ENST00000578469 GAR1Q9NY12 217 aaKnown RBP13.27□□□□□ -0.29
SREBF1-218ENST00000578469 ARL2-SNX15V9GYD0 113 aa13.27□□□□□ -0.29
SREBF1-218ENST00000578469 LINC01548A6NM66 108 aa13.26□□□□□ -0.29
SREBF1-218ENST00000578469 F6UZH7 168 aa13.26□□□□□ -0.29
SREBF1-218ENST00000578469 G3V318 75 aa13.26□□□□□ -0.29
SREBF1-218ENST00000578469 M0R036 132 aa13.26□□□□□ -0.29
SREBF1-218ENST00000578469 TOMM40O96008 361 aa13.26□□□□□ -0.29
SREBF1-218ENST00000578469 IGKV1-17P01599 117 aa13.26□□□□□ -0.29
SREBF1-218ENST00000578469 IGHG2P01859 326 aa13.26□□□□□ -0.29
SREBF1-218ENST00000578469 IGF1P05019 195 aa13.26□□□□□ -0.29
SREBF1-218ENST00000578469 FCGR2BP31994 310 aaPredicted RBP13.26□□□□□ -0.29
SREBF1-218ENST00000578469 FAM74A3Q4VXF1 159 aa13.26□□□□□ -0.29
SREBF1-218ENST00000578469 LINC00305Q7Z4B0 112 aa13.26□□□□□ -0.29
SREBF1-218ENST00000578469 NECAP1Q8NC96 275 aa13.26□□□□□ -0.29
SREBF1-218ENST00000578469 OR51G1Q8NGK1 321 aa13.26□□□□□ -0.29
SREBF1-218ENST00000578469 Q8WTZ3 238 aa13.26□□□□□ -0.29
SREBF1-218ENST00000578469 NIPSNAP3BQ9BS92 247 aa13.26□□□□□ -0.29
SREBF1-218ENST00000578469 HIGD1AQ9Y241 93 aa13.26□□□□□ -0.29
SREBF1-218ENST00000578469 PUS1Q9Y606 427 aaKnown RBP eCLIP13.26□□□□□ -0.29
SREBF1-218ENST00000578469 IER3P46695 156 aa13.25□□□□□ -0.29
SREBF1-218ENST00000578469 LYZP61626 148 aa13.25□□□□□ -0.29
SREBF1-218ENST00000578469 RHOGP84095 191 aa13.25□□□□□ -0.29
SREBF1-218ENST00000578469 BTN1A1Q13410 526 aa13.25□□□□□ -0.29
SREBF1-218ENST00000578469 OR5AU1Q8NGC0 362 aa13.25□□□□□ -0.29
SREBF1-218ENST00000578469 TVP23CQ96ET8 276 aa13.25□□□□□ -0.29
SREBF1-218ENST00000578469 UHRF2Q96PU4 802 aa13.25□□□□□ -0.29
SREBF1-218ENST00000578469 TRBV9A0A0B4J1U6 114 aa13.24□□□□□ -0.29
SREBF1-218ENST00000578469 H3BQ15 152 aa13.24□□□□□ -0.29
SREBF1-218ENST00000578469 IGHV4-59P01825 116 aa13.24□□□□□ -0.29
SREBF1-218ENST00000578469 FAM90A2PQ658T7 463 aa13.24□□□□□ -0.29
SREBF1-218ENST00000578469 Q6YL49 198 aa13.24□□□□□ -0.29
SREBF1-218ENST00000578469 IL17RELQ6ZVW7 336 aa13.24□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms