RNA–Protein interactions for RNA: ENST00000576218.5

SMG6-220, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 3

Gene SMG6, Length 902 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-220ENST00000576218 CCSO14618 274 aa11.36□□□□□ -0.59
SMG6-220ENST00000576218 PSG1P11464 419 aa11.36□□□□□ -0.59
SMG6-220ENST00000576218 RPL35AP18077 110 aaKnown RBP11.36□□□□□ -0.59
SMG6-220ENST00000576218 LYZP61626 148 aa11.36□□□□□ -0.59
SMG6-220ENST00000576218 ASAH1Q13510 395 aa11.36□□□□□ -0.59
SMG6-220ENST00000576218 OR8G2PQ6IF36 304 aa11.36□□□□□ -0.59
SMG6-220ENST00000576218 LINC00322Q6ZN03 302 aaPredicted RBP11.36□□□□□ -0.59
SMG6-220ENST00000576218 APRG1Q8IVJ8 170 aa11.36□□□□□ -0.59
SMG6-220ENST00000576218 ZBTB8BQ8NAP8 495 aaPredicted RBP11.36□□□□□ -0.59
SMG6-220ENST00000576218 OR4D5Q8NGN0 318 aa11.36□□□□□ -0.59
SMG6-220ENST00000576218 ZNF431Q8TF32 576 aaPredicted RBP11.36□□□□□ -0.59
SMG6-220ENST00000576218 RNF125Q96EQ8 232 aa11.36□□□□□ -0.59
SMG6-220ENST00000576218 STAB2Q8WWQ8 2551 aa11.36□□□□□ -0.59
SMG6-220ENST00000576218 L7N2F9 121 aa11.35□□□□□ -0.59
SMG6-220ENST00000576218 UPK1BO75841 260 aa11.35□□□□□ -0.59
SMG6-220ENST00000576218 VAMP2P63027 116 aa11.35□□□□□ -0.59
SMG6-220ENST00000576218 ID3Q02535 119 aa11.35□□□□□ -0.59
SMG6-220ENST00000576218 OR2F1Q13607 317 aa11.35□□□□□ -0.59
SMG6-220ENST00000576218 USF2Q15853 346 aaPredicted RBP11.35□□□□□ -0.59
SMG6-220ENST00000576218 FAM90A2PQ658T7 463 aa11.35□□□□□ -0.59
SMG6-220ENST00000576218 LILRB2Q8N423 598 aa11.35□□□□□ -0.59
SMG6-220ENST00000576218 C12orf45Q8N5I9 185 aaPredicted RBP11.35□□□□□ -0.59
SMG6-220ENST00000576218 STPG3Q8N7X2 389 aa11.35□□□□□ -0.59
SMG6-220ENST00000576218 CITED4Q96RK1 184 aa11.35□□□□□ -0.59
SMG6-220ENST00000576218 MAP6D1Q9H9H5 199 aa11.35□□□□□ -0.59
SMG6-220ENST00000576218 TBC1D24Q9ULP9 559 aa11.35□□□□□ -0.59
SMG6-220ENST00000576218 SNRPGP15A8MWD9 76 aa11.34□□□□□ -0.59
SMG6-220ENST00000576218 AP2S1P53680 142 aaPredicted RBP11.34□□□□□ -0.59
SMG6-220ENST00000576218 DEFA1P59665 94 aa11.34□□□□□ -0.59
SMG6-220ENST00000576218 DEFA3P59666 94 aa11.34□□□□□ -0.59
SMG6-220ENST00000576218 ZNF90Q03938 601 aa11.34□□□□□ -0.59
SMG6-220ENST00000576218 ACOT7LQ6ZUV0 252 aa11.34□□□□□ -0.59
SMG6-220ENST00000576218 MUC7Q8TAX7 377 aa11.34□□□□□ -0.59
SMG6-220ENST00000576218 GPN1Q9HCN4 374 aaPredicted RBP11.34□□□□□ -0.59
SMG6-220ENST00000576218 TRAV2A0A0B4J234 112 aa11.33□□□□□ -0.6
SMG6-220ENST00000576218 C3orf84H3BNL1 204 aa11.33□□□□□ -0.6
SMG6-220ENST00000576218 LYL1P12980 280 aa11.33□□□□□ -0.6
SMG6-220ENST00000576218 BCAP31P51572 246 aa11.33□□□□□ -0.6
SMG6-220ENST00000576218 DEFB131AP59861 70 aa11.33□□□□□ -0.6
SMG6-220ENST00000576218 SMIM8Q96KF7 97 aa11.33□□□□□ -0.6
SMG6-220ENST00000576218 RAB40CQ96S21 281 aa11.33□□□□□ -0.6
SMG6-220ENST00000576218 TRGV9Q99603 122 aa11.33□□□□□ -0.6
SMG6-220ENST00000576218 MGAT4CQ9UBM8 478 aa11.33□□□□□ -0.6
SMG6-220ENST00000576218 LSM5Q9Y4Y9 91 aaKnown RBP11.33□□□□□ -0.6
SMG6-220ENST00000576218 TENM3Q9P273 2699 aa11.32□□□□□ -0.6
SMG6-220ENST00000576218 UBE2CO00762 179 aa11.32□□□□□ -0.6
SMG6-220ENST00000576218 S100A7P31151 101 aa11.32□□□□□ -0.6
SMG6-220ENST00000576218 S100A10P60903 97 aa11.32□□□□□ -0.6
SMG6-220ENST00000576218 RRAS2P62070 204 aaPredicted RBP11.32□□□□□ -0.6
SMG6-220ENST00000576218 ZNF124Q15973 351 aa11.32□□□□□ -0.6
SMG6-220ENST00000576218 LEMD1Q68G75 181 aa11.32□□□□□ -0.6
SMG6-220ENST00000576218 C16orf54Q6UWD8 224 aa11.32□□□□□ -0.6
SMG6-220ENST00000576218 GSG1LQ6UXU4 331 aa11.32□□□□□ -0.6
SMG6-220ENST00000576218 SIGLEC15Q6ZMC9 328 aa11.32□□□□□ -0.6
SMG6-220ENST00000576218 BPIFCQ8NFQ6 507 aa11.32□□□□□ -0.6
SMG6-220ENST00000576218 RCL1Q9Y2P8 373 aaKnown RBP11.32□□□□□ -0.6
SMG6-220ENST00000576218 DNAH9Q9NYC9 4486 aa11.32□□□□□ -0.6
SMG6-220ENST00000576218 IGKV1D-37A0A075B6S9 117 aa11.31□□□□□ -0.6
SMG6-220ENST00000576218 CFDP00746 253 aaPredicted RBP11.31□□□□□ -0.6
SMG6-220ENST00000576218 METTL15P1P0C7V9 234 aa11.31□□□□□ -0.6
SMG6-220ENST00000576218 ZNF688P0C7X2 276 aa11.31□□□□□ -0.6
SMG6-220ENST00000576218 PVALBP20472 110 aaPredicted RBP11.31□□□□□ -0.6
SMG6-220ENST00000576218 SNRPD3P62318 126 aaKnown RBP11.31□□□□□ -0.6
SMG6-220ENST00000576218 DEFB135Q30KP9 77 aa11.31□□□□□ -0.6
SMG6-220ENST00000576218 STHQ8IWL8 128 aa11.31□□□□□ -0.6
SMG6-220ENST00000576218 OR10P1Q8NGE3 313 aa11.31□□□□□ -0.6
SMG6-220ENST00000576218 KIR2DL5BA0A0G2JN68 375 aa11.3□□□□□ -0.6
SMG6-220ENST00000576218 KIR2DL5BA0A0G2JPC4 375 aa11.3□□□□□ -0.6
SMG6-220ENST00000576218 TSC22D2O75157 780 aa11.3□□□□□ -0.6
SMG6-220ENST00000576218 MBPP02686 304 aaPredicted RBP11.3□□□□□ -0.6
SMG6-220ENST00000576218 CAV2P51636 162 aa11.3□□□□□ -0.6
SMG6-220ENST00000576218 TAS2R30P59541 319 aa11.3□□□□□ -0.6
SMG6-220ENST00000576218 KIR2DL5AQ8N109 375 aa11.3□□□□□ -0.6
SMG6-220ENST00000576218 THAP8Q8NA92 274 aa11.3□□□□□ -0.6
SMG6-220ENST00000576218 KIR2DL5BQ8NHK3 375 aa11.3□□□□□ -0.6
SMG6-220ENST00000576218 GLMPQ8WWB7 406 aa11.3□□□□□ -0.6
SMG6-220ENST00000576218 C2orf50Q96LR7 162 aa11.3□□□□□ -0.6
SMG6-220ENST00000576218 NRN1Q9NPD7 142 aa11.3□□□□□ -0.6
SMG6-220ENST00000576218 FBXL17Q9UF56 701 aa11.3□□□□□ -0.6
SMG6-220ENST00000576218 U3KQE9 123 aa11.3□□□□□ -0.6
SMG6-220ENST00000576218 PRSS46E5RG02 174 aa11.29□□□□□ -0.6
SMG6-220ENST00000576218 K7EQG2 157 aa11.29□□□□□ -0.6
SMG6-220ENST00000576218 SPRY2O43597 315 aa11.29□□□□□ -0.6
SMG6-220ENST00000576218 BUB3O43684 328 aa11.29□□□□□ -0.6
SMG6-220ENST00000576218 IL5P05113 134 aa11.29□□□□□ -0.6
SMG6-220ENST00000576218 ORM2P19652 201 aa11.29□□□□□ -0.6
SMG6-220ENST00000576218 DLK1P80370 383 aa11.29□□□□□ -0.6
SMG6-220ENST00000576218 PSMG4Q5JS54 123 aa11.29□□□□□ -0.6
SMG6-220ENST00000576218 ZFAND6Q6FIF0 208 aa11.29□□□□□ -0.6
SMG6-220ENST00000576218 Q6ZWC4 215 aa11.29□□□□□ -0.6
SMG6-220ENST00000576218 TMEM144Q7Z5S9 345 aa11.29□□□□□ -0.6
SMG6-220ENST00000576218 OR8I2Q8N0Y5 310 aa11.29□□□□□ -0.6
SMG6-220ENST00000576218 FAM24BQ8N5W8 94 aa11.29□□□□□ -0.6
SMG6-220ENST00000576218 OR1B1Q8NGR6 318 aa11.29□□□□□ -0.6
SMG6-220ENST00000576218 TMEM147Q9BVK8 224 aa11.29□□□□□ -0.6
SMG6-220ENST00000576218 CSTL1Q9H114 145 aa11.29□□□□□ -0.6
SMG6-220ENST00000576218 NBEAL2Q6ZNJ1 2754 aa11.29□□□□□ -0.6
SMG6-220ENST00000576218 IGKV1OR2-108A0A075B7D4 117 aa11.28□□□□□ -0.6
SMG6-220ENST00000576218 IL17DQ8TAD2 202 aa11.28□□□□□ -0.6
SMG6-220ENST00000576218 OVOL2Q9BRP0 275 aa11.28□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms