RNA–Protein interactions for RNA: ENST00000575976.1

NUP88-211, Transcript of nucleoporin 88, humanhuman

TSL 2

Gene NUP88, Length 599 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-211ENST00000575976 SMIM3Q9BZL3 60 aa6.51□□□□□ -1.37
NUP88-211ENST00000575976 UQCC1Q9NVA1 299 aa6.51□□□□□ -1.37
NUP88-211ENST00000575976 UFC1Q9Y3C8 167 aa6.51□□□□□ -1.37
NUP88-211ENST00000575976 PRKDCP78527 4128 aaKnown RBP6.5□□□□□ -1.37
NUP88-211ENST00000575976 UBE2L5PA0A1B0GUS4 154 aa6.5□□□□□ -1.37
NUP88-211ENST00000575976 RNF222A6NCQ9 220 aa6.5□□□□□ -1.37
NUP88-211ENST00000575976 G3V4G9 280 aa6.5□□□□□ -1.37
NUP88-211ENST00000575976 SAP30O75446 220 aa6.5□□□□□ -1.37
NUP88-211ENST00000575976 IL4P05112 153 aa6.5□□□□□ -1.37
NUP88-211ENST00000575976 C8orf88P0DMB2 117 aa6.5□□□□□ -1.37
NUP88-211ENST00000575976 FOLR2P14207 255 aa6.5□□□□□ -1.37
NUP88-211ENST00000575976 CBLN1P23435 193 aa6.5□□□□□ -1.37
NUP88-211ENST00000575976 NUP62P37198 522 aaPredicted RBP6.5□□□□□ -1.37
NUP88-211ENST00000575976 USF2Q15853 346 aaPredicted RBP6.5□□□□□ -1.37
NUP88-211ENST00000575976 SAMD5Q5TGI4 173 aa6.5□□□□□ -1.37
NUP88-211ENST00000575976 TEPPQ6URK8 271 aa6.5□□□□□ -1.37
NUP88-211ENST00000575976 CYP2G1PQ6ZSU1 146 aa6.5□□□□□ -1.37
NUP88-211ENST00000575976 OR11H4Q8NGC9 324 aa6.5□□□□□ -1.37
NUP88-211ENST00000575976 OR51G1Q8NGK1 321 aa6.5□□□□□ -1.37
NUP88-211ENST00000575976 AQP10Q96PS8 301 aa6.5□□□□□ -1.37
NUP88-211ENST00000575976 MGST2Q99735 147 aa6.5□□□□□ -1.37
NUP88-211ENST00000575976 WFDC1Q9HC57 220 aa6.5□□□□□ -1.37
NUP88-211ENST00000575976 SIGLEC8Q9NYZ4 499 aa6.5□□□□□ -1.37
NUP88-211ENST00000575976 MRPL27Q9P0M9 148 aaKnown RBP6.5□□□□□ -1.37
NUP88-211ENST00000575976 TNFSF18Q9UNG2 199 aa6.5□□□□□ -1.37
NUP88-211ENST00000575976 WDR83OSQ9Y284 106 aa6.5□□□□□ -1.37
NUP88-211ENST00000575976 LSM4Q9Y4Z0 139 aaKnown RBP6.5□□□□□ -1.37
NUP88-211ENST00000575976 SELENOKQ9Y6D0 94 aa6.5□□□□□ -1.37
NUP88-211ENST00000575976 WNK1Q9H4A3 2382 aa6.5□□□□□ -1.37
NUP88-211ENST00000575976 TRRAPQ9Y4A5 3859 aa6.5□□□□□ -1.37
NUP88-211ENST00000575976 KMT2CQ8NEZ4 4911 aaKnown RBP6.49□□□□□ -1.37
NUP88-211ENST00000575976 IGHV3-49A0A0A0MS15 119 aa6.49□□□□□ -1.37
NUP88-211ENST00000575976 WI2-2373I1.2A0A1W2PRP0 233 aa6.49□□□□□ -1.37
NUP88-211ENST00000575976 AGPAT2O15120 278 aa6.49□□□□□ -1.37
NUP88-211ENST00000575976 ARPC5O15511 151 aa6.49□□□□□ -1.37
NUP88-211ENST00000575976 APOHP02749 345 aaPredicted RBP6.49□□□□□ -1.37
NUP88-211ENST00000575976 FABP1P07148 127 aa6.49□□□□□ -1.37
NUP88-211ENST00000575976 FGF7P21781 194 aa6.49□□□□□ -1.37
NUP88-211ENST00000575976 INSL3P51460 131 aa6.49□□□□□ -1.37
NUP88-211ENST00000575976 LYZP61626 148 aa6.49□□□□□ -1.37
NUP88-211ENST00000575976 BTNL8Q6UX41 500 aa6.49□□□□□ -1.37
NUP88-211ENST00000575976 TCTE3Q8IZS6 198 aa6.49□□□□□ -1.37
NUP88-211ENST00000575976 INO80EQ8NBZ0 244 aaPredicted RBP6.49□□□□□ -1.37
NUP88-211ENST00000575976 DYNLRB2Q8TF09 96 aa6.49□□□□□ -1.37
NUP88-211ENST00000575976 MARC2Q969Z3 335 aa6.49□□□□□ -1.37
NUP88-211ENST00000575976 ATP5SQ99766 215 aa6.49□□□□□ -1.37
NUP88-211ENST00000575976 GINS3Q9BRX5 216 aa6.49□□□□□ -1.37
NUP88-211ENST00000575976 PBDC1Q9BVG4 233 aa6.49□□□□□ -1.37
NUP88-211ENST00000575976 GGTLC1Q9BX51 225 aa6.49□□□□□ -1.37
NUP88-211ENST00000575976 WDR61Q9GZS3 305 aaKnown RBP6.49□□□□□ -1.37
NUP88-211ENST00000575976 DAZ1Q9NQZ3 744 aaKnown RBP6.49□□□□□ -1.37
NUP88-211ENST00000575976 FBXL17Q9UF56 701 aa6.49□□□□□ -1.37
NUP88-211ENST00000575976 SMPXQ9UHP9 88 aa6.49□□□□□ -1.37
NUP88-211ENST00000575976 SLC45A2Q9UMX9 530 aa6.49□□□□□ -1.37
NUP88-211ENST00000575976 IGHV3OR16-13A0A075B7E8 117 aa6.48□□□□□ -1.37
NUP88-211ENST00000575976 IGHV3-74A0A0B4J1X5 117 aa6.48□□□□□ -1.37
NUP88-211ENST00000575976 IGHV3-66A0A0C4DH42 116 aa6.48□□□□□ -1.37
NUP88-211ENST00000575976 IGHV7-4-1A0A0J9YVY3 117 aa6.48□□□□□ -1.37
NUP88-211ENST00000575976 DFFBO76075 338 aa6.48□□□□□ -1.37
NUP88-211ENST00000575976 IGLV1-51P01701 117 aa6.48□□□□□ -1.37
NUP88-211ENST00000575976 NPPCP23582 126 aa6.48□□□□□ -1.37
NUP88-211ENST00000575976 CAMLGP49069 296 aa6.48□□□□□ -1.37
NUP88-211ENST00000575976 AP2S1P53680 142 aaPredicted RBP6.48□□□□□ -1.37
NUP88-211ENST00000575976 SELENOTP62341 195 aa6.48□□□□□ -1.37
NUP88-211ENST00000575976 CD300CQ08708 224 aa6.48□□□□□ -1.37
NUP88-211ENST00000575976 DEFB114Q30KQ6 69 aa6.48□□□□□ -1.37
NUP88-211ENST00000575976 AKAP14Q86UN6 197 aa6.48□□□□□ -1.37
NUP88-211ENST00000575976 BPIFCQ8NFQ6 507 aa6.48□□□□□ -1.37
NUP88-211ENST00000575976 RNF125Q96EQ8 232 aa6.48□□□□□ -1.37
NUP88-211ENST00000575976 METTL26Q96S19 204 aa6.48□□□□□ -1.37
NUP88-211ENST00000575976 RHPN1-AS1Q9BWJ2 59 aa6.48□□□□□ -1.37
NUP88-211ENST00000575976 GPR61Q9BZJ8 451 aa6.48□□□□□ -1.37
NUP88-211ENST00000575976 MFFQ9GZY8 342 aa6.48□□□□□ -1.37
NUP88-211ENST00000575976 MLXQ9UH92 298 aa6.48□□□□□ -1.37
NUP88-211ENST00000575976 RABAC1Q9UI14 185 aa6.48□□□□□ -1.37
NUP88-211ENST00000575976 U3KQE9 123 aa6.48□□□□□ -1.37
NUP88-211ENST00000575976 HMSDA8MTL9 139 aa6.47□□□□□ -1.37
NUP88-211ENST00000575976 CHEK1O14757 476 aa6.47□□□□□ -1.37
NUP88-211ENST00000575976 MPDU1O75352 247 aa6.47□□□□□ -1.37
NUP88-211ENST00000575976 CFDP00746 253 aaPredicted RBP6.47□□□□□ -1.37
NUP88-211ENST00000575976 IFNA5P01569 189 aa6.47□□□□□ -1.37
NUP88-211ENST00000575976 HNRNPCP07910 306 aaKnown RBP eCLIP6.47□□□□□ -1.37
NUP88-211ENST00000575976 LINC00869P0C866 280 aa6.47□□□□□ -1.37
NUP88-211ENST00000575976 ORM2P19652 201 aa6.47□□□□□ -1.37
NUP88-211ENST00000575976 CXCL2P19875 107 aa6.47□□□□□ -1.37
NUP88-211ENST00000575976 CRYBB3P26998 211 aa6.47□□□□□ -1.37
NUP88-211ENST00000575976 RPL29P47914 159 aaKnown RBP6.47□□□□□ -1.37
NUP88-211ENST00000575976 PRR20EP86478 221 aa6.47□□□□□ -1.37
NUP88-211ENST00000575976 PRR20CP86479 221 aa6.47□□□□□ -1.37
NUP88-211ENST00000575976 PRR20DP86480 221 aa6.47□□□□□ -1.37
NUP88-211ENST00000575976 PRR20BP86481 221 aa6.47□□□□□ -1.37
NUP88-211ENST00000575976 PRR20AP86496 221 aa6.47□□□□□ -1.37
NUP88-211ENST00000575976 RAB31Q13636 194 aa6.47□□□□□ -1.37
NUP88-211ENST00000575976 OPCMLQ14982 345 aa6.47□□□□□ -1.37
NUP88-211ENST00000575976 CD300EQ496F6 205 aaPredicted RBP6.47□□□□□ -1.37
NUP88-211ENST00000575976 MIC13Q5XKP0 118 aa6.47□□□□□ -1.37
NUP88-211ENST00000575976 STPG3Q8N7X2 389 aa6.47□□□□□ -1.37
NUP88-211ENST00000575976 OR1B1Q8NGR6 318 aa6.47□□□□□ -1.37
NUP88-211ENST00000575976 SCGB1C1Q8TD33 95 aa6.47□□□□□ -1.37
NUP88-211ENST00000575976 ST8SIA2Q92186 375 aa6.47□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms