RNA–Protein interactions for RNA: ENST00000574087.1

NUP88-208, Transcript of nucleoporin 88, humanhuman

TSL 2

Gene NUP88, Length 548 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-208ENST00000574087 PKMYT1Q99640 499 aa2.65□□□□□ -1.99
NUP88-208ENST00000574087 CHAC1Q9BUX1 264 aa2.65□□□□□ -1.99
NUP88-208ENST00000574087 TMEM147Q9BVK8 224 aa2.65□□□□□ -1.99
NUP88-208ENST00000574087 RPP21Q9H633 154 aaKnown RBP2.65□□□□□ -1.99
NUP88-208ENST00000574087 HEBP1Q9NRV9 189 aa2.65□□□□□ -1.99
NUP88-208ENST00000574087 ZNF586Q9NXT0 402 aa2.65□□□□□ -1.99
NUP88-208ENST00000574087 CCDC167Q9P0B6 97 aa2.65□□□□□ -1.99
NUP88-208ENST00000574087 ZNF443Q9Y2A4 671 aaPredicted RBP2.65□□□□□ -1.99
NUP88-208ENST00000574087 TNS2Q63HR2 1409 aa2.65□□□□□ -1.99
NUP88-208ENST00000574087 ABCA3Q99758 1704 aa2.65□□□□□ -1.99
NUP88-208ENST00000574087 ITGB4P16144 1822 aa2.64□□□□□ -1.99
NUP88-208ENST00000574087 TRBV19A0A075B6N1 114 aa2.64□□□□□ -1.99
NUP88-208ENST00000574087 IGHV5-51A0A0C4DH38 117 aa2.64□□□□□ -1.99
NUP88-208ENST00000574087 IGHV1-69-2A0A0G2JMI3 117 aa2.64□□□□□ -1.99
NUP88-208ENST00000574087 A0A1B0GVX0 72 aa2.64□□□□□ -1.99
NUP88-208ENST00000574087 TRDV1A0A1B0GX56 115 aa2.64□□□□□ -1.99
NUP88-208ENST00000574087 C7orf71A4D174 169 aa2.64□□□□□ -1.99
NUP88-208ENST00000574087 MEIS3P1A6NDR6 274 aa2.64□□□□□ -1.99
NUP88-208ENST00000574087 FAM183AA6NL82 134 aa2.64□□□□□ -1.99
NUP88-208ENST00000574087 ZNF670-ZNF695F2Z2N8 137 aa2.64□□□□□ -1.99
NUP88-208ENST00000574087 FNDC10F2Z333 226 aa2.64□□□□□ -1.99
NUP88-208ENST00000574087 DPM2O94777 84 aa2.64□□□□□ -1.99
NUP88-208ENST00000574087 CD14P08571 375 aa2.64□□□□□ -1.99
NUP88-208ENST00000574087 MMP7P09237 267 aaPredicted RBP2.64□□□□□ -1.99
NUP88-208ENST00000574087 PPP1CCP36873 323 aaKnown RBP2.64□□□□□ -1.99
NUP88-208ENST00000574087 RND2P52198 227 aa2.64□□□□□ -1.99
NUP88-208ENST00000574087 MTPNP58546 118 aa2.64□□□□□ -1.99
NUP88-208ENST00000574087 TAS2R46P59540 309 aa2.64□□□□□ -1.99
NUP88-208ENST00000574087 SNRPFP62306 86 aaKnown RBP2.64□□□□□ -1.99
NUP88-208ENST00000574087 HLA-DRB3P79483 266 aa2.64□□□□□ -1.99
NUP88-208ENST00000574087 TCEAL5Q5H9L2 206 aa2.64□□□□□ -1.99
NUP88-208ENST00000574087 MEIG1Q5JSS6 88 aa2.64□□□□□ -1.99
NUP88-208ENST00000574087 LAIR2Q6ISS4 152 aa2.64□□□□□ -1.99
NUP88-208ENST00000574087 SCGB1D4Q6XE38 83 aa2.64□□□□□ -1.99
NUP88-208ENST00000574087 LRP11Q86VZ4 500 aa2.64□□□□□ -1.99
NUP88-208ENST00000574087 NPWQ8N729 165 aa2.64□□□□□ -1.99
NUP88-208ENST00000574087 ZFP41Q8N8Y5 198 aa2.64□□□□□ -1.99
NUP88-208ENST00000574087 OR2M3Q8NG83 312 aa2.64□□□□□ -1.99
NUP88-208ENST00000574087 OR4C16Q8NGL9 310 aa2.64□□□□□ -1.99
NUP88-208ENST00000574087 OR1J4Q8NGS1 313 aa2.64□□□□□ -1.99
NUP88-208ENST00000574087 OR2T35Q8NGX2 323 aa2.64□□□□□ -1.99
NUP88-208ENST00000574087 SLC25A46Q96AG3 418 aa2.64□□□□□ -1.99
NUP88-208ENST00000574087 SPIN2AQ99865 258 aa2.64□□□□□ -1.99
NUP88-208ENST00000574087 SPIN2BQ9BPZ2 258 aa2.64□□□□□ -1.99
NUP88-208ENST00000574087 PRSS27Q9BQR3 290 aa2.64□□□□□ -1.99
NUP88-208ENST00000574087 NAA38Q9BRA0 125 aaKnown RBP2.64□□□□□ -1.99
NUP88-208ENST00000574087 SPANXDQ9BXN6 97 aa2.64□□□□□ -1.99
NUP88-208ENST00000574087 WDR61Q9GZS3 305 aaKnown RBP2.64□□□□□ -1.99
NUP88-208ENST00000574087 TMEM191AQ9H0A3 160 aa2.64□□□□□ -1.99
NUP88-208ENST00000574087 GABARAPL1Q9H0R8 117 aa2.64□□□□□ -1.99
NUP88-208ENST00000574087 RERGLQ9H628 205 aa2.64□□□□□ -1.99
NUP88-208ENST00000574087 EDA2RQ9HAV5 297 aa2.64□□□□□ -1.99
NUP88-208ENST00000574087 KCNIP2Q9NS61 270 aa2.64□□□□□ -1.99
NUP88-208ENST00000574087 CA10Q9NS85 328 aa2.64□□□□□ -1.99
NUP88-208ENST00000574087 RBM12B-AS1Q9P1G2 102 aa2.64□□□□□ -1.99
NUP88-208ENST00000574087 WASHC3Q9Y3C0 194 aa2.64□□□□□ -1.99
NUP88-208ENST00000574087 MPC1Q9Y5U8 109 aa2.64□□□□□ -1.99
NUP88-208ENST00000574087 GLI3P10071 1580 aa2.64□□□□□ -1.99
NUP88-208ENST00000574087 LRRC37A3O60309 1634 aa2.64□□□□□ -1.99
NUP88-208ENST00000574087 TRIP11Q15643 1979 aa2.63□□□□□ -1.99
NUP88-208ENST00000574087 C3P01024 1663 aa2.63□□□□□ -1.99
NUP88-208ENST00000574087 PLCH1Q4KWH8 1693 aa2.63□□□□□ -1.99
NUP88-208ENST00000574087 LMO7Q8WWI1 1683 aa2.63□□□□□ -1.99
NUP88-208ENST00000574087 RREB1Q92766 1687 aa2.63□□□□□ -1.99
NUP88-208ENST00000574087 TMEM131Q92545 1883 aa2.63□□□□□ -1.99
NUP88-208ENST00000574087 TIAM2Q8IVF5 1701 aa2.63□□□□□ -1.99
NUP88-208ENST00000574087 hCG_1818297A0A087WSY0 165 aa2.63□□□□□ -1.99
NUP88-208ENST00000574087 TRAV19A0A0A6YYK7 116 aa2.63□□□□□ -1.99
NUP88-208ENST00000574087 IGLV1-36A0A0B4J1U3 117 aa2.63□□□□□ -1.99
NUP88-208ENST00000574087 LOC285095A0A1B0GVY8 99 aa2.63□□□□□ -1.99
NUP88-208ENST00000574087 KANTRA0A1W2PQU2 76 aa2.63□□□□□ -1.99
NUP88-208ENST00000574087 C5orf49A4QMS7 147 aa2.63□□□□□ -1.99
NUP88-208ENST00000574087 NAP1L6A6NFF2 107 aa2.63□□□□□ -1.99
NUP88-208ENST00000574087 KNCNA6PVL3 124 aa2.63□□□□□ -1.99
NUP88-208ENST00000574087 A8MT66 165 aa2.63□□□□□ -1.99
NUP88-208ENST00000574087 SNRPGP15A8MWD9 76 aa2.63□□□□□ -1.99
NUP88-208ENST00000574087 INS-IGF2F8WCM5 200 aa2.63□□□□□ -1.99
NUP88-208ENST00000574087 APOC4-APOC2K7ER74 178 aa2.63□□□□□ -1.99
NUP88-208ENST00000574087 CA2P00918 260 aa2.63□□□□□ -1.99
NUP88-208ENST00000574087 PTHP01270 115 aa2.63□□□□□ -1.99
NUP88-208ENST00000574087 HLA-DRB1P01911 266 aa2.63□□□□□ -1.99
NUP88-208ENST00000574087 C1QAP02745 245 aa2.63□□□□□ -1.99
NUP88-208ENST00000574087 IL5P05113 134 aa2.63□□□□□ -1.99
NUP88-208ENST00000574087 SPINK8P0C7L1 97 aa2.63□□□□□ -1.99
NUP88-208ENST00000574087 CISD3P0C7P0 127 aa2.63□□□□□ -1.99
NUP88-208ENST00000574087 SMIM10L2AP0DMW4 78 aa2.63□□□□□ -1.99
NUP88-208ENST00000574087 SMIM10L2BP0DMW5 78 aa2.63□□□□□ -1.99
NUP88-208ENST00000574087 FKBP2P26885 142 aaKnown RBP2.63□□□□□ -1.99
NUP88-208ENST00000574087 PSMB8P28062 276 aa2.63□□□□□ -1.99
NUP88-208ENST00000574087 TPPP2P59282 170 aa2.63□□□□□ -1.99
NUP88-208ENST00000574087 DAD1P61803 113 aa2.63□□□□□ -1.99
NUP88-208ENST00000574087 FABP5Q01469 135 aa2.63□□□□□ -1.99
NUP88-208ENST00000574087 CATR1Q13166 79 aa2.63□□□□□ -1.99
NUP88-208ENST00000574087 LCE1CQ5T751 118 aa2.63□□□□□ -1.99
NUP88-208ENST00000574087 LCE1BQ5T7P3 118 aa2.63□□□□□ -1.99
NUP88-208ENST00000574087 ALKAL2Q6UX46 152 aa2.63□□□□□ -1.99
NUP88-208ENST00000574087 ZNF705AQ6ZN79 300 aaPredicted RBP2.63□□□□□ -1.99
NUP88-208ENST00000574087 ANKRD29Q8N6D5 301 aa2.63□□□□□ -1.99
NUP88-208ENST00000574087 LY6G5BQ8NDX9 201 aa2.63□□□□□ -1.99
NUP88-208ENST00000574087 LMX1AQ8TE12 382 aa2.63□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms