RNA–Protein interactions for RNA: ENST00000571558.5

RPAIN-209, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 1,423 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-209ENST00000571558 CTSGP08311 255 aa10.52□□□□□ -0.73
RPAIN-209ENST00000571558 FGF7P21781 194 aa10.52□□□□□ -0.73
RPAIN-209ENST00000571558 CDX1P47902 265 aaPredicted RBP10.52□□□□□ -0.73
RPAIN-209ENST00000571558 NPBWR1P48145 328 aa10.52□□□□□ -0.73
RPAIN-209ENST00000571558 BTNL8Q6UX41 500 aa10.52□□□□□ -0.73
RPAIN-209ENST00000571558 SLC51BQ86UW2 128 aa10.52□□□□□ -0.73
RPAIN-209ENST00000571558 GINS3Q9BRX5 216 aa10.52□□□□□ -0.73
RPAIN-209ENST00000571558 ZNF471Q9BX82 626 aaPredicted RBP10.52□□□□□ -0.73
RPAIN-209ENST00000571558 OR2T8A6NH00 312 aa10.51□□□□□ -0.73
RPAIN-209ENST00000571558 I3L521 148 aa10.51□□□□□ -0.73
RPAIN-209ENST00000571558 TRBV12-3P01733 135 aa10.51□□□□□ -0.73
RPAIN-209ENST00000571558 CLEC3BP05452 202 aa10.51□□□□□ -0.73
RPAIN-209ENST00000571558 LGALS1P09382 135 aaKnown RBP10.51□□□□□ -0.73
RPAIN-209ENST00000571558 C4BPBP20851 252 aa10.51□□□□□ -0.73
RPAIN-209ENST00000571558 OR10J1P30954 320 aa10.51□□□□□ -0.73
RPAIN-209ENST00000571558 GPR183P32249 361 aa10.51□□□□□ -0.73
RPAIN-209ENST00000571558 ADMP35318 185 aa10.51□□□□□ -0.73
RPAIN-209ENST00000571558 RUNX1Q01196 453 aa10.51□□□□□ -0.73
RPAIN-209ENST00000571558 Q56UQ5 140 aa10.51□□□□□ -0.73
RPAIN-209ENST00000571558 CLEC19AQ6UXS0 136 aa10.51□□□□□ -0.73
RPAIN-209ENST00000571558 TRGV9Q99603 122 aa10.51□□□□□ -0.73
RPAIN-209ENST00000571558 CHRDL1Q9BU40 450 aa10.51□□□□□ -0.73
RPAIN-209ENST00000571558 NPCDR1Q9BY65 106 aa10.51□□□□□ -0.73
RPAIN-209ENST00000571558 SLC45A2Q9UMX9 530 aa10.51□□□□□ -0.73
RPAIN-209ENST00000571558 SACSQ9NZJ4 4579 aa10.51□□□□□ -0.73
RPAIN-209ENST00000571558 TRAV30A0A087WSZ9 112 aa10.5□□□□□ -0.73
RPAIN-209ENST00000571558 AGPAT2O15120 278 aa10.5□□□□□ -0.73
RPAIN-209ENST00000571558 GNG7O60262 68 aa10.5□□□□□ -0.73
RPAIN-209ENST00000571558 ZNF90Q03938 601 aa10.5□□□□□ -0.73
RPAIN-209ENST00000571558 TIGITQ495A1 244 aa10.5□□□□□ -0.73
RPAIN-209ENST00000571558 C18orf65Q6ZTR6 163 aa10.5□□□□□ -0.73
RPAIN-209ENST00000571558 GGTLC1Q9BX51 225 aa10.5□□□□□ -0.73
RPAIN-209ENST00000571558 GAR1Q9NY12 217 aaKnown RBP10.5□□□□□ -0.73
RPAIN-209ENST00000571558 RFNGQ9Y644 331 aa10.5□□□□□ -0.73
RPAIN-209ENST00000571558 ZFP92A6NM28 416 aa10.5□□□□□ -0.73
RPAIN-209ENST00000571558 TGOLN2O43493 480 aa10.5□□□□□ -0.73
RPAIN-209ENST00000571558 ATP6V0CP27449 155 aa10.5□□□□□ -0.73
RPAIN-209ENST00000571558 CAMLGP49069 296 aa10.5□□□□□ -0.73
RPAIN-209ENST00000571558 PRR20EP86478 221 aa10.5□□□□□ -0.73
RPAIN-209ENST00000571558 PRR20CP86479 221 aa10.5□□□□□ -0.73
RPAIN-209ENST00000571558 PRR20DP86480 221 aa10.5□□□□□ -0.73
RPAIN-209ENST00000571558 PRR20BP86481 221 aa10.5□□□□□ -0.73
RPAIN-209ENST00000571558 PRR20AP86496 221 aa10.5□□□□□ -0.73
RPAIN-209ENST00000571558 FAM209BQ5JX69 171 aa10.5□□□□□ -0.73
RPAIN-209ENST00000571558 SPSB3Q6PJ21 355 aa10.5□□□□□ -0.73
RPAIN-209ENST00000571558 TMEM182Q6ZP80 229 aaPredicted RBP10.5□□□□□ -0.73
RPAIN-209ENST00000571558 BAP18Q8IXM2 172 aa10.5□□□□□ -0.73
RPAIN-209ENST00000571558 HSD17B11Q8NBQ5 300 aa10.5□□□□□ -0.73
RPAIN-209ENST00000571558 SCGB1C1Q8TD33 95 aa10.5□□□□□ -0.73
RPAIN-209ENST00000571558 C4orf3Q8WVX3 66 aa10.5□□□□□ -0.73
RPAIN-209ENST00000571558 OR5B12Q96R08 314 aa10.5□□□□□ -0.73
RPAIN-209ENST00000571558 RSG1Q9BU20 258 aa10.5□□□□□ -0.73
RPAIN-209ENST00000571558 SH3BGRL3Q9H299 93 aa10.5□□□□□ -0.73
RPAIN-209ENST00000571558 PEF1Q9UBV8 284 aaKnown RBP10.5□□□□□ -0.73
RPAIN-209ENST00000571558 ANKRD34BA5PLL1 514 aa10.49□□□□□ -0.73
RPAIN-209ENST00000571558 PPP5D1E7EU14 171 aa10.49□□□□□ -0.73
RPAIN-209ENST00000571558 BMPR1BO00238 502 aa10.49□□□□□ -0.73
RPAIN-209ENST00000571558 LINC00869P0C866 280 aa10.49□□□□□ -0.73
RPAIN-209ENST00000571558 SPP1P10451 314 aa10.49□□□□□ -0.73
RPAIN-209ENST00000571558 TPT1P13693 172 aaKnown RBP10.49□□□□□ -0.73
RPAIN-209ENST00000571558 RPL29P47914 159 aaKnown RBP10.49□□□□□ -0.73
RPAIN-209ENST00000571558 YPEL3P61236 119 aaPredicted RBP10.49□□□□□ -0.73
RPAIN-209ENST00000571558 C9orf66Q5T8R8 295 aa10.49□□□□□ -0.73
RPAIN-209ENST00000571558 CYP2G1PQ6ZSU1 146 aa10.49□□□□□ -0.73
RPAIN-209ENST00000571558 ST8SIA2Q92186 375 aa10.49□□□□□ -0.73
RPAIN-209ENST00000571558 GNPNAT1Q96EK6 184 aaPredicted RBP10.49□□□□□ -0.73
RPAIN-209ENST00000571558 TIMM9Q9Y5J7 89 aa10.49□□□□□ -0.73
RPAIN-209ENST00000571558 DNAH1Q9P2D7 4330 aa10.48□□□□□ -0.73
RPAIN-209ENST00000571558 DNAH7Q8WXX0 4024 aa10.48□□□□□ -0.73
RPAIN-209ENST00000571558 NUDT19A8MXV4 375 aa10.48□□□□□ -0.73
RPAIN-209ENST00000571558 ARL3P36405 182 aa10.48□□□□□ -0.73
RPAIN-209ENST00000571558 SELENOTP62341 195 aa10.48□□□□□ -0.73
RPAIN-209ENST00000571558 EIF5AP63241 154 aaKnown RBP10.48□□□□□ -0.73
RPAIN-209ENST00000571558 RAB31Q13636 194 aa10.48□□□□□ -0.73
RPAIN-209ENST00000571558 C8orf86Q6ZUL3 223 aa10.48□□□□□ -0.73
RPAIN-209ENST00000571558 PSMG3Q9BT73 122 aaPredicted RBP10.48□□□□□ -0.73
RPAIN-209ENST00000571558 NUPL2O15504 423 aaKnown RBP10.47□□□□□ -0.73
RPAIN-209ENST00000571558 YIF1AO95070 293 aa10.47□□□□□ -0.73
RPAIN-209ENST00000571558 TOMM40O96008 361 aa10.47□□□□□ -0.73
RPAIN-209ENST00000571558 CFDP00746 253 aaPredicted RBP10.47□□□□□ -0.73
RPAIN-209ENST00000571558 PSG1P11464 419 aa10.47□□□□□ -0.73
RPAIN-209ENST00000571558 GATA2P23769 480 aaPredicted RBP10.47□□□□□ -0.73
RPAIN-209ENST00000571558 STPG3Q8N7X2 389 aa10.47□□□□□ -0.73
RPAIN-209ENST00000571558 BPIFCQ8NFQ6 507 aa10.47□□□□□ -0.73
RPAIN-209ENST00000571558 OR2G3Q8NGZ4 309 aa10.47□□□□□ -0.73
RPAIN-209ENST00000571558 RCHY1Q96PM5 261 aa10.47□□□□□ -0.73
RPAIN-209ENST00000571558 ASCL2Q99929 193 aa10.47□□□□□ -0.73
RPAIN-209ENST00000571558 SLC25A32Q9H2D1 315 aa10.47□□□□□ -0.73
RPAIN-209ENST00000571558 PLA2G2EQ9NZK7 142 aa10.47□□□□□ -0.73
RPAIN-209ENST00000571558 IGHV4OR15-8A0A075B7B6 117 aa10.46□□□□□ -0.74
RPAIN-209ENST00000571558 A0A087WW49 117 aa10.46□□□□□ -0.74
RPAIN-209ENST00000571558 C17orf112F2Z3M2 114 aa10.46□□□□□ -0.74
RPAIN-209ENST00000571558 GGCTO75223 188 aaKnown RBP10.46□□□□□ -0.74
RPAIN-209ENST00000571558 SCGB2A1O75556 95 aa10.46□□□□□ -0.74
RPAIN-209ENST00000571558 OR2C1O95371 312 aa10.46□□□□□ -0.74
RPAIN-209ENST00000571558 HSPB1P04792 205 aaKnown RBP10.46□□□□□ -0.74
RPAIN-209ENST00000571558 SEC11BP0C7V7 166 aa10.46□□□□□ -0.74
RPAIN-209ENST00000571558 RD3LP0DJH9 198 aa10.46□□□□□ -0.74
RPAIN-209ENST00000571558 MIC13Q5XKP0 118 aa10.46□□□□□ -0.74
RPAIN-209ENST00000571558 ZNF600Q6ZNG1 722 aa10.46□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 69.1 ms