RNA–Protein interactions for RNA: ENST00000571028.1

CCDC40-205, Transcript of coiled-coil domain containing 40, humanhuman

TSL 5

Gene CCDC40, Length 593 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-205ENST00000571028 TOMM20LQ6UXN7 152 aa10.06□□□□□ -0.8
CCDC40-205ENST00000571028 TMEM252Q8N6L7 170 aa10.06□□□□□ -0.8
CCDC40-205ENST00000571028 IL17DQ8TAD2 202 aa10.06□□□□□ -0.8
CCDC40-205ENST00000571028 Q8WTZ3 238 aa10.06□□□□□ -0.8
CCDC40-205ENST00000571028 TMEM190Q8WZ59 177 aa10.06□□□□□ -0.8
CCDC40-205ENST00000571028 LYRM2Q9NU23 88 aaPredicted RBP10.06□□□□□ -0.8
CCDC40-205ENST00000571028 CSMD3Q7Z407 3707 aa10.06□□□□□ -0.8
CCDC40-205ENST00000571028 TMEM213A2RRL7 107 aa10.05□□□□□ -0.8
CCDC40-205ENST00000571028 E5RGE8 158 aa10.05□□□□□ -0.8
CCDC40-205ENST00000571028 PET100P0DJ07 73 aa10.05□□□□□ -0.8
CCDC40-205ENST00000571028 CBLN1P23435 193 aa10.05□□□□□ -0.8
CCDC40-205ENST00000571028 DLK1P80370 383 aa10.05□□□□□ -0.8
CCDC40-205ENST00000571028 ZNF90Q03938 601 aa10.05□□□□□ -0.8
CCDC40-205ENST00000571028 SLC38A11Q08AI6 406 aa10.05□□□□□ -0.8
CCDC40-205ENST00000571028 STX12Q86Y82 276 aa10.05□□□□□ -0.8
CCDC40-205ENST00000571028 LILRB2Q8N423 598 aa10.05□□□□□ -0.8
CCDC40-205ENST00000571028 ZNF414Q96IQ9 312 aa10.05□□□□□ -0.8
CCDC40-205ENST00000571028 SPATA25Q9BR10 227 aa10.05□□□□□ -0.8
CCDC40-205ENST00000571028 RNF126Q9BV68 326 aa10.05□□□□□ -0.8
CCDC40-205ENST00000571028 MBD2Q9UBB5 411 aa10.05□□□□□ -0.8
CCDC40-205ENST00000571028 hCG_2014768A0A024R1R8 64 aa10.04□□□□□ -0.8
CCDC40-205ENST00000571028 IGHV3-66A0A0C4DH42 116 aa10.04□□□□□ -0.8
CCDC40-205ENST00000571028 RD3LP0DJH9 198 aa10.04□□□□□ -0.8
CCDC40-205ENST00000571028 P2RY1P47900 373 aa10.04□□□□□ -0.8
CCDC40-205ENST00000571028 SULT1A1P50225 295 aa10.04□□□□□ -0.8
CCDC40-205ENST00000571028 BTNL8Q6UX41 500 aa10.04□□□□□ -0.8
CCDC40-205ENST00000571028 THAP6Q8TBB0 222 aa10.04□□□□□ -0.8
CCDC40-205ENST00000571028 PBDC1Q9BVG4 233 aa10.04□□□□□ -0.8
CCDC40-205ENST00000571028 SLC25A31Q9H0C2 315 aa10.04□□□□□ -0.8
CCDC40-205ENST00000571028 DAZ1Q9NQZ3 744 aaKnown RBP10.04□□□□□ -0.8
CCDC40-205ENST00000571028 IGKV1D-37A0A075B6S9 117 aa10.03□□□□□ -0.8
CCDC40-205ENST00000571028 A8MWP6 167 aa10.03□□□□□ -0.8
CCDC40-205ENST00000571028 TOMM40O96008 361 aa10.03□□□□□ -0.8
CCDC40-205ENST00000571028 IL4P05112 153 aa10.03□□□□□ -0.8
CCDC40-205ENST00000571028 GIPP09681 153 aaPredicted RBP10.03□□□□□ -0.8
CCDC40-205ENST00000571028 IGHV4-30-4P0DP06 118 aa10.03□□□□□ -0.8
CCDC40-205ENST00000571028 PSG1P11464 419 aa10.03□□□□□ -0.8
CCDC40-205ENST00000571028 GATA2P23769 480 aaPredicted RBP10.03□□□□□ -0.8
CCDC40-205ENST00000571028 YPEL3P61236 119 aaPredicted RBP10.03□□□□□ -0.8
CCDC40-205ENST00000571028 EWSR1Q01844 656 aaKnown RBP eCLIP10.03□□□□□ -0.8
CCDC40-205ENST00000571028 NHLH2Q02577 135 aa10.03□□□□□ -0.8
CCDC40-205ENST00000571028 Q5BKY6 102 aa10.03□□□□□ -0.8
CCDC40-205ENST00000571028 GINS3Q9BRX5 216 aa10.03□□□□□ -0.8
CCDC40-205ENST00000571028 IGKV1OR2-108A0A075B7D4 117 aa10.02□□□□□ -0.81
CCDC40-205ENST00000571028 TRAV14DV4A0A0A6YYC5 116 aa10.02□□□□□ -0.81
CCDC40-205ENST00000571028 IZUMO1RA6ND01 250 aa10.02□□□□□ -0.81
CCDC40-205ENST00000571028 APOHP02749 345 aaPredicted RBP10.02□□□□□ -0.81
CCDC40-205ENST00000571028 FABP1P07148 127 aa10.02□□□□□ -0.81
CCDC40-205ENST00000571028 NPPCP23582 126 aa10.02□□□□□ -0.81
CCDC40-205ENST00000571028 LYZP61626 148 aa10.02□□□□□ -0.81
CCDC40-205ENST00000571028 HBG1P69891 147 aa10.02□□□□□ -0.81
CCDC40-205ENST00000571028 HBG2P69892 147 aa10.02□□□□□ -0.81
CCDC40-205ENST00000571028 CLINT1Q14677 625 aa10.02□□□□□ -0.81
CCDC40-205ENST00000571028 GUCA2BQ16661 112 aa10.02□□□□□ -0.81
CCDC40-205ENST00000571028 DEFB114Q30KQ6 69 aa10.02□□□□□ -0.81
CCDC40-205ENST00000571028 CD300EQ496F6 205 aaPredicted RBP10.02□□□□□ -0.81
CCDC40-205ENST00000571028 TMEM144Q7Z5S9 345 aa10.02□□□□□ -0.81
CCDC40-205ENST00000571028 THAP8Q8NA92 274 aa10.02□□□□□ -0.81
CCDC40-205ENST00000571028 OR51G1Q8NGK1 321 aa10.02□□□□□ -0.81
CCDC40-205ENST00000571028 CHAC2Q8WUX2 184 aa10.02□□□□□ -0.81
CCDC40-205ENST00000571028 TRGV9Q99603 122 aa10.02□□□□□ -0.81
CCDC40-205ENST00000571028 SMIM3Q9BZL3 60 aa10.02□□□□□ -0.81
CCDC40-205ENST00000571028 ZFAND3Q9H8U3 227 aa10.02□□□□□ -0.81
CCDC40-205ENST00000571028 NPVFQ9HCQ7 196 aa10.02□□□□□ -0.81
CCDC40-205ENST00000571028 MRPL27Q9P0M9 148 aaKnown RBP10.02□□□□□ -0.81
CCDC40-205ENST00000571028 MLXQ9UH92 298 aa10.02□□□□□ -0.81
CCDC40-205ENST00000571028 HYDINQ4G0P3 5121 aa10.01□□□□□ -0.81
CCDC40-205ENST00000571028 IGKV3-7A0A075B6H7 116 aa10.01□□□□□ -0.81
CCDC40-205ENST00000571028 IGHV7-4-1A0A0J9YVY3 117 aa10.01□□□□□ -0.81
CCDC40-205ENST00000571028 UBE2L5PA0A1B0GUS4 154 aa10.01□□□□□ -0.81
CCDC40-205ENST00000571028 K7EMT4 169 aa10.01□□□□□ -0.81
CCDC40-205ENST00000571028 SCAF4O95104 1147 aaKnown RBP10.01□□□□□ -0.81
CCDC40-205ENST00000571028 IGLV1-51P01701 117 aa10.01□□□□□ -0.81
CCDC40-205ENST00000571028 RPL12P30050 165 aaKnown RBP10.01□□□□□ -0.81
CCDC40-205ENST00000571028 S100A11P31949 105 aa10.01□□□□□ -0.81
CCDC40-205ENST00000571028 ELLP55199 621 aaPredicted RBP10.01□□□□□ -0.81
CCDC40-205ENST00000571028 RAP2BP61225 183 aa10.01□□□□□ -0.81
CCDC40-205ENST00000571028 CYP2G1PQ6ZSU1 146 aa10.01□□□□□ -0.81
CCDC40-205ENST00000571028 OR2T35Q8NGX2 323 aa10.01□□□□□ -0.81
CCDC40-205ENST00000571028 MARC2Q969Z3 335 aa10.01□□□□□ -0.81
CCDC40-205ENST00000571028 METTL26Q96S19 204 aa10.01□□□□□ -0.81
CCDC40-205ENST00000571028 TMEM147Q9BVK8 224 aa10.01□□□□□ -0.81
CCDC40-205ENST00000571028 RHPN1-AS1Q9BWJ2 59 aa10.01□□□□□ -0.81
CCDC40-205ENST00000571028 UQCC1Q9NVA1 299 aa10.01□□□□□ -0.81
CCDC40-205ENST00000571028 SMPXQ9UHP9 88 aa10.01□□□□□ -0.81
CCDC40-205ENST00000571028 FXYD6-FXYD2A0A087WZ82 144 aa10□□□□□ -0.81
CCDC40-205ENST00000571028 SMLR1H3BR10 107 aa10□□□□□ -0.81
CCDC40-205ENST00000571028 CHEK1O14757 476 aa10□□□□□ -0.81
CCDC40-205ENST00000571028 BAXQ07812 192 aa10□□□□□ -0.81
CCDC40-205ENST00000571028 FGL1Q08830 312 aa10□□□□□ -0.81
CCDC40-205ENST00000571028 USF2Q15853 346 aaPredicted RBP10□□□□□ -0.81
CCDC40-205ENST00000571028 TEPPQ6URK8 271 aa10□□□□□ -0.81
CCDC40-205ENST00000571028 Q6ZNX1 250 aa10□□□□□ -0.81
CCDC40-205ENST00000571028 TMEM182Q6ZP80 229 aaPredicted RBP10□□□□□ -0.81
CCDC40-205ENST00000571028 RBPMS2Q6ZRY4 209 aaKnown RBP10□□□□□ -0.81
CCDC40-205ENST00000571028 OR5C1Q8NGR4 320 aa10□□□□□ -0.81
CCDC40-205ENST00000571028 ST8SIA2Q92186 375 aa10□□□□□ -0.81
CCDC40-205ENST00000571028 PPP1R14BQ96C90 147 aa10□□□□□ -0.81
CCDC40-205ENST00000571028 RNF125Q96EQ8 232 aa10□□□□□ -0.81
CCDC40-205ENST00000571028 NARS2Q96I59 477 aaKnown RBP10□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 64 ms