RNA–Protein interactions for RNA: ENST00000570475.5

USP43-202, Transcript of ubiquitin specific peptidase 43, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene USP43, Length 3,500 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP43-202ENST00000570475 HTR1DP28221 377 aa12.42□□□□□ -0.42
USP43-202ENST00000570475 GOLT1AQ6ZVE7 132 aa12.42□□□□□ -0.42
USP43-202ENST00000570475 LAMTOR2Q9Y2Q5 125 aa12.42□□□□□ -0.42
USP43-202ENST00000570475 INSIG2Q9Y5U4 225 aa12.42□□□□□ -0.42
USP43-202ENST00000570475 CNTFRP26992 372 aa12.41□□□□□ -0.42
USP43-202ENST00000570475 TMPRSS3P57727 454 aa12.41□□□□□ -0.42
USP43-202ENST00000570475 VSTM2AQ8TAG5 236 aa12.41□□□□□ -0.42
USP43-202ENST00000570475 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP12.41□□□□□ -0.42
USP43-202ENST00000570475 LOC389332A0A1B0GUA5 103 aa12.41□□□□□ -0.42
USP43-202ENST00000570475 HYPMO75409 117 aa12.41□□□□□ -0.42
USP43-202ENST00000570475 ZNF788Q6ZQV5 615 aa12.41□□□□□ -0.42
USP43-202ENST00000570475 SLC25A48Q6ZT89 311 aaKnown RBP12.41□□□□□ -0.42
USP43-202ENST00000570475 RITA1Q96K30 269 aa12.41□□□□□ -0.42
USP43-202ENST00000570475 WASHC3Q9Y3C0 194 aa12.41□□□□□ -0.42
USP43-202ENST00000570475 TACC2O95359 2948 aa12.41□□□□□ -0.42
USP43-202ENST00000570475 TRBV9A0A0B4J1U6 114 aa12.41□□□□□ -0.42
USP43-202ENST00000570475 RPL27AP46776 148 aaKnown RBP12.41□□□□□ -0.42
USP43-202ENST00000570475 SELENOTP62341 195 aa12.41□□□□□ -0.42
USP43-202ENST00000570475 GFRALQ6UXV0 394 aa12.41□□□□□ -0.42
USP43-202ENST00000570475 OSR1Q8TAX0 266 aaPredicted RBP12.41□□□□□ -0.42
USP43-202ENST00000570475 PERPQ96FX8 193 aa12.41□□□□□ -0.42
USP43-202ENST00000570475 SLC25A2Q9BXI2 301 aa12.41□□□□□ -0.42
USP43-202ENST00000570475 FBXL15Q9H469 300 aa12.41□□□□□ -0.42
USP43-202ENST00000570475 C2orf83Q53S99 150 aa12.4□□□□□ -0.42
USP43-202ENST00000570475 EXOC3-AS1Q8N2X6 119 aa12.4□□□□□ -0.42
USP43-202ENST00000570475 ZNF436-AS1Q8NC38 126 aaPredicted RBP12.4□□□□□ -0.42
USP43-202ENST00000570475 C18orf32Q8TCD1 76 aa12.4□□□□□ -0.42
USP43-202ENST00000570475 HILPDAQ9Y5L2 63 aa12.4□□□□□ -0.42
USP43-202ENST00000570475 H0YJW9 148 aa12.4□□□□□ -0.42
USP43-202ENST00000570475 STPG4Q8N801 248 aa12.4□□□□□ -0.42
USP43-202ENST00000570475 C11orf52Q96A22 123 aa12.4□□□□□ -0.42
USP43-202ENST00000570475 BET1LQ9NYM9 111 aa12.4□□□□□ -0.42
USP43-202ENST00000570475 FAM215AQ9Y5M1 114 aa12.4□□□□□ -0.42
USP43-202ENST00000570475 TEX43Q6ZNM6 134 aa12.4□□□□□ -0.43
USP43-202ENST00000570475 KALRNO60229 2985 aa12.4□□□□□ -0.43
USP43-202ENST00000570475 Q0VG73 95 aa12.39□□□□□ -0.43
USP43-202ENST00000570475 CIARTQ8N365 385 aaPredicted RBP12.39□□□□□ -0.43
USP43-202ENST00000570475 ONECUT1Q9UBC0 465 aa12.39□□□□□ -0.43
USP43-202ENST00000570475 LINC00312Q9Y6C7 94 aa12.39□□□□□ -0.43
USP43-202ENST00000570475 RPEQ96AT9 228 aa12.39□□□□□ -0.43
USP43-202ENST00000570475 C20orf144Q9BQM9 153 aa12.39□□□□□ -0.43
USP43-202ENST00000570475 NIT1Q86X76 327 aa12.38□□□□□ -0.43
USP43-202ENST00000570475 SPACA3Q8IXA5 215 aa12.38□□□□□ -0.43
USP43-202ENST00000570475 ZNF257Q9Y2Q1 563 aa12.38□□□□□ -0.43
USP43-202ENST00000570475 C17orf100A8MU93 164 aa12.38□□□□□ -0.43
USP43-202ENST00000570475 PRRX1P54821 245 aa12.38□□□□□ -0.43
USP43-202ENST00000570475 EPDR1Q9UM22 224 aa12.38□□□□□ -0.43
USP43-202ENST00000570475 TRAV9-1A0A075B6T8 112 aa12.38□□□□□ -0.43
USP43-202ENST00000570475 TCRBV4S1A1TA0A5B7 111 aa12.38□□□□□ -0.43
USP43-202ENST00000570475 hDV102S1A0JD36 115 aa12.38□□□□□ -0.43
USP43-202ENST00000570475 SRSF12Q8WXF0 261 aaKnown RBP12.38□□□□□ -0.43
USP43-202ENST00000570475 A0A1W2PPI3 338 aa12.37□□□□□ -0.43
USP43-202ENST00000570475 LEPROTL1O95214 131 aa12.37□□□□□ -0.43
USP43-202ENST00000570475 FXYD7P58549 80 aa12.37□□□□□ -0.43
USP43-202ENST00000570475 PLA2G2CQ5R387 149 aa12.37□□□□□ -0.43
USP43-202ENST00000570475 ZNF329Q86UD4 541 aa12.37□□□□□ -0.43
USP43-202ENST00000570475 GRAMD2BQ96HH9 432 aa12.37□□□□□ -0.43
USP43-202ENST00000570475 MRPL32Q9BYC8 188 aaKnown RBP12.37□□□□□ -0.43
USP43-202ENST00000570475 DMXL1Q9Y485 3027 aa12.37□□□□□ -0.43
USP43-202ENST00000570475 CUL9Q8IWT3 2517 aa12.37□□□□□ -0.43
USP43-202ENST00000570475 A8MWL6 223 aa12.37□□□□□ -0.43
USP43-202ENST00000570475 COX19Q49B96 90 aa12.37□□□□□ -0.43
USP43-202ENST00000570475 KLF17Q5JT82 389 aaPredicted RBP12.37□□□□□ -0.43
USP43-202ENST00000570475 OR4C5Q8NGB2 326 aa12.37□□□□□ -0.43
USP43-202ENST00000570475 OR8B3Q8NGG8 313 aa12.37□□□□□ -0.43
USP43-202ENST00000570475 OR4C46A6NHA9 309 aa12.37□□□□□ -0.43
USP43-202ENST00000570475 BTF3P20290 206 aaKnown RBP12.37□□□□□ -0.43
USP43-202ENST00000570475 TMEM249Q2WGJ8 235 aa12.37□□□□□ -0.43
USP43-202ENST00000570475 OR10J3Q5JRS4 329 aa12.37□□□□□ -0.43
USP43-202ENST00000570475 PATE2Q6UY27 113 aa12.37□□□□□ -0.43
USP43-202ENST00000570475 PRO3102Q9H379 93 aa12.37□□□□□ -0.43
USP43-202ENST00000570475 Q9H3A6 140 aa12.37□□□□□ -0.43
USP43-202ENST00000570475 LY6HO94772 140 aa12.36□□□□□ -0.43
USP43-202ENST00000570475 LHBP01229 141 aa12.36□□□□□ -0.43
USP43-202ENST00000570475 IGHV3-23P01764 117 aa12.36□□□□□ -0.43
USP43-202ENST00000570475 PRSS3P2Q8NHM4 247 aa12.36□□□□□ -0.43
USP43-202ENST00000570475 CACNG8Q8WXS5 425 aa12.36□□□□□ -0.43
USP43-202ENST00000570475 RASL11BQ9BPW5 248 aa12.36□□□□□ -0.43
USP43-202ENST00000570475 NDUFA4L2Q9NRX3 87 aa12.36□□□□□ -0.43
USP43-202ENST00000570475 ZNF841Q6ZN19 808 aa12.36□□□□□ -0.43
USP43-202ENST00000570475 LOXL4Q96JB6 756 aa12.36□□□□□ -0.43
USP43-202ENST00000570475 C19orf24Q9BVV8 132 aa12.36□□□□□ -0.43
USP43-202ENST00000570475 MBD3L4A6NDZ8 208 aaPredicted RBP12.36□□□□□ -0.43
USP43-202ENST00000570475 MBD3L3A6NE82 208 aaPredicted RBP12.36□□□□□ -0.43
USP43-202ENST00000570475 FAM181BA6NEQ2 426 aa12.36□□□□□ -0.43
USP43-202ENST00000570475 MBD3L5A6NJ08 208 aaPredicted RBP12.36□□□□□ -0.43
USP43-202ENST00000570475 CRYABP02511 175 aaKnown RBP12.36□□□□□ -0.43
USP43-202ENST00000570475 IGLC2P0DOY2 106 aa12.36□□□□□ -0.43
USP43-202ENST00000570475 IGLC3P0DOY3 106 aa12.36□□□□□ -0.43
USP43-202ENST00000570475 CA7P43166 264 aa12.36□□□□□ -0.43
USP43-202ENST00000570475 HBBP68871 147 aa12.36□□□□□ -0.43
USP43-202ENST00000570475 OR8A1Q8NGG7 326 aa12.36□□□□□ -0.43
USP43-202ENST00000570475 MBD3L2Q8NHZ7 208 aaPredicted RBP12.36□□□□□ -0.43
USP43-202ENST00000570475 ADIPOQQ15848 244 aa12.35□□□□□ -0.43
USP43-202ENST00000570475 LINC00173Q6ZV60 143 aa12.35□□□□□ -0.43
USP43-202ENST00000570475 GPR82Q96P67 336 aa12.35□□□□□ -0.43
USP43-202ENST00000570475 CHRDL1Q9BU40 450 aa12.35□□□□□ -0.43
USP43-202ENST00000570475 HIGD1AQ9Y241 93 aa12.35□□□□□ -0.43
USP43-202ENST00000570475 FAM90A27PA6NNH2 459 aa12.35□□□□□ -0.43
USP43-202ENST00000570475 TM4SF5O14894 197 aa12.35□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 81.9 ms