RNA–Protein interactions for RNA: ENST00000570324.1

NPLOC4-204, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 3

Gene NPLOC4, Length 414 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-204ENST00000570324 RND2P52198 227 aa6.58□□□□□ -1.36
NPLOC4-204ENST00000570324 RAB14P61106 215 aa6.58□□□□□ -1.36
NPLOC4-204ENST00000570324 TMEM187Q14656 261 aa6.58□□□□□ -1.36
NPLOC4-204ENST00000570324 C2orf83Q53S99 150 aa6.58□□□□□ -1.36
NPLOC4-204ENST00000570324 Q5BKY6 102 aa6.58□□□□□ -1.36
NPLOC4-204ENST00000570324 PVRIGQ6DKI7 326 aa6.58□□□□□ -1.36
NPLOC4-204ENST00000570324 LILRB2Q8N423 598 aa6.58□□□□□ -1.36
NPLOC4-204ENST00000570324 OR11H2Q8NH07 326 aa6.58□□□□□ -1.36
NPLOC4-204ENST00000570324 LHFPL5Q8TAF8 219 aa6.58□□□□□ -1.36
NPLOC4-204ENST00000570324 RNASEH2CQ8TDP1 164 aaKnown RBP6.58□□□□□ -1.36
NPLOC4-204ENST00000570324 GPR146Q96CH1 333 aa6.58□□□□□ -1.36
NPLOC4-204ENST00000570324 ZNF414Q96IQ9 312 aa6.58□□□□□ -1.36
NPLOC4-204ENST00000570324 MFFQ9GZY8 342 aa6.58□□□□□ -1.36
NPLOC4-204ENST00000570324 FNDC4Q9H6D8 234 aaPredicted RBP6.58□□□□□ -1.36
NPLOC4-204ENST00000570324 ANKRD20A5PA0PJZ0 165 aa6.57□□□□□ -1.36
NPLOC4-204ENST00000570324 ATF4P18848 351 aaPredicted RBP6.57□□□□□ -1.36
NPLOC4-204ENST00000570324 NPY1RP25929 384 aa6.57□□□□□ -1.36
NPLOC4-204ENST00000570324 CRYBB3P26998 211 aa6.57□□□□□ -1.36
NPLOC4-204ENST00000570324 OR10J1P30954 320 aa6.57□□□□□ -1.36
NPLOC4-204ENST00000570324 EWSR1Q01844 656 aaKnown RBP eCLIP6.57□□□□□ -1.36
NPLOC4-204ENST00000570324 BSXQ3C1V8 233 aa6.57□□□□□ -1.36
NPLOC4-204ENST00000570324 PRSS54Q6PEW0 395 aa6.57□□□□□ -1.36
NPLOC4-204ENST00000570324 ZNF680Q8NEM1 530 aa6.57□□□□□ -1.36
NPLOC4-204ENST00000570324 C11orf45Q8TAV5 145 aa6.57□□□□□ -1.36
NPLOC4-204ENST00000570324 LINC00476Q8WZB0 136 aa6.57□□□□□ -1.36
NPLOC4-204ENST00000570324 IL22RA2Q969J5 263 aa6.57□□□□□ -1.36
NPLOC4-204ENST00000570324 ACY3Q96HD9 319 aa6.57□□□□□ -1.36
NPLOC4-204ENST00000570324 MRPL36Q9P0J6 103 aaKnown RBP6.57□□□□□ -1.36
NPLOC4-204ENST00000570324 PFDN2Q9UHV9 154 aa6.57□□□□□ -1.36
NPLOC4-204ENST00000570324 HSPB11Q9Y547 144 aa6.57□□□□□ -1.36
NPLOC4-204ENST00000570324 TMEM56-RWDD3S4R434 201 aa6.57□□□□□ -1.36
NPLOC4-204ENST00000570324 HMSDA8MTL9 139 aa6.56□□□□□ -1.36
NPLOC4-204ENST00000570324 K7EQG2 157 aa6.56□□□□□ -1.36
NPLOC4-204ENST00000570324 IL4P05112 153 aa6.56□□□□□ -1.36
NPLOC4-204ENST00000570324 H2AFB2P0C5Z0 115 aa6.56□□□□□ -1.36
NPLOC4-204ENST00000570324 ZNF688P0C7X2 276 aa6.56□□□□□ -1.36
NPLOC4-204ENST00000570324 IGLC1P0CG04 106 aa6.56□□□□□ -1.36
NPLOC4-204ENST00000570324 BTCP35070 178 aa6.56□□□□□ -1.36
NPLOC4-204ENST00000570324 CCR6P51684 374 aa6.56□□□□□ -1.36
NPLOC4-204ENST00000570324 RAP2BP61225 183 aa6.56□□□□□ -1.36
NPLOC4-204ENST00000570324 YPEL3P61236 119 aaPredicted RBP6.56□□□□□ -1.36
NPLOC4-204ENST00000570324 SRPXP78539 464 aa6.56□□□□□ -1.36
NPLOC4-204ENST00000570324 DHRS2Q13268 280 aa6.56□□□□□ -1.36
NPLOC4-204ENST00000570324 RBMS2Q15434 407 aaKnown RBP6.56□□□□□ -1.36
NPLOC4-204ENST00000570324 AARDQ4LEZ3 155 aa6.56□□□□□ -1.36
NPLOC4-204ENST00000570324 LGI3Q8N145 548 aa6.56□□□□□ -1.36
NPLOC4-204ENST00000570324 OR1S1Q8NH92 325 aa6.56□□□□□ -1.36
NPLOC4-204ENST00000570324 PHLDA1Q8WV24 401 aaPredicted RBP6.56□□□□□ -1.36
NPLOC4-204ENST00000570324 GPN1Q9HCN4 374 aaPredicted RBP6.56□□□□□ -1.36
NPLOC4-204ENST00000570324 PRR13Q9NZ81 148 aa6.56□□□□□ -1.36
NPLOC4-204ENST00000570324 FBXL17Q9UF56 701 aa6.56□□□□□ -1.36
NPLOC4-204ENST00000570324 A0A0B4J2A0 478 aa6.55□□□□□ -1.36
NPLOC4-204ENST00000570324 IGKV1-17P01599 117 aa6.55□□□□□ -1.36
NPLOC4-204ENST00000570324 GIPP09681 153 aaPredicted RBP6.55□□□□□ -1.36
NPLOC4-204ENST00000570324 RD3LP0DJH9 198 aa6.55□□□□□ -1.36
NPLOC4-204ENST00000570324 SNRPD3P62318 126 aaKnown RBP6.55□□□□□ -1.36
NPLOC4-204ENST00000570324 RAB11AP62491 216 aa6.55□□□□□ -1.36
NPLOC4-204ENST00000570324 KLF9Q13886 244 aaPredicted RBP6.55□□□□□ -1.36
NPLOC4-204ENST00000570324 SMCO1Q147U7 214 aa6.55□□□□□ -1.36
NPLOC4-204ENST00000570324 TMEM41BQ5BJD5 291 aa6.55□□□□□ -1.36
NPLOC4-204ENST00000570324 ACTL10Q5JWF8 245 aa6.55□□□□□ -1.36
NPLOC4-204ENST00000570324 MORN3Q6PF18 240 aaPredicted RBP6.55□□□□□ -1.36
NPLOC4-204ENST00000570324 LYZL2Q7Z4W2 148 aa6.55□□□□□ -1.36
NPLOC4-204ENST00000570324 TMED4Q7Z7H5 227 aa6.55□□□□□ -1.36
NPLOC4-204ENST00000570324 SLC51BQ86UW2 128 aa6.55□□□□□ -1.36
NPLOC4-204ENST00000570324 FAM24BQ8N5W8 94 aa6.55□□□□□ -1.36
NPLOC4-204ENST00000570324 EIF4E3Q8N5X7 224 aaKnown RBP6.55□□□□□ -1.36
NPLOC4-204ENST00000570324 DTD1Q8TEA8 209 aa6.55□□□□□ -1.36
NPLOC4-204ENST00000570324 NPIPB3Q92617 1050 aa6.55□□□□□ -1.36
NPLOC4-204ENST00000570324 SLC35E1Q96K37 410 aa6.55□□□□□ -1.36
NPLOC4-204ENST00000570324 PBDC1Q9BVG4 233 aa6.55□□□□□ -1.36
NPLOC4-204ENST00000570324 RBKSQ9H477 322 aa6.55□□□□□ -1.36
NPLOC4-204ENST00000570324 SHPKQ9UHJ6 478 aa6.55□□□□□ -1.36
NPLOC4-204ENST00000570324 LINC00854A0A1B0GVQ3 168 aa6.54□□□□□ -1.36
NPLOC4-204ENST00000570324 ZFP92A6NM28 416 aa6.54□□□□□ -1.36
NPLOC4-204ENST00000570324 KNCNA6PVL3 124 aa6.54□□□□□ -1.36
NPLOC4-204ENST00000570324 KRBOX1C9JBD0 128 aa6.54□□□□□ -1.36
NPLOC4-204ENST00000570324 DEFB4AO15263 64 aa6.54□□□□□ -1.36
NPLOC4-204ENST00000570324 TOMM40O96008 361 aa6.54□□□□□ -1.36
NPLOC4-204ENST00000570324 FABP1P07148 127 aa6.54□□□□□ -1.36
NPLOC4-204ENST00000570324 SPP1P10451 314 aa6.54□□□□□ -1.36
NPLOC4-204ENST00000570324 VAMP1P23763 118 aa6.54□□□□□ -1.36
NPLOC4-204ENST00000570324 NUP62P37198 522 aaPredicted RBP6.54□□□□□ -1.36
NPLOC4-204ENST00000570324 ATP5IP56385 69 aaPredicted RBP6.54□□□□□ -1.36
NPLOC4-204ENST00000570324 NANOS2P60321 138 aaKnown RBP6.54□□□□□ -1.36
NPLOC4-204ENST00000570324 NUTF2P61970 127 aaKnown RBP6.54□□□□□ -1.36
NPLOC4-204ENST00000570324 FCN2Q15485 313 aa6.54□□□□□ -1.36
NPLOC4-204ENST00000570324 NMSQ5H8A3 153 aa6.54□□□□□ -1.36
NPLOC4-204ENST00000570324 PSMG4Q5JS54 123 aa6.54□□□□□ -1.36
NPLOC4-204ENST00000570324 C16orf54Q6UWD8 224 aa6.54□□□□□ -1.36
NPLOC4-204ENST00000570324 OR51G1Q8NGK1 321 aa6.54□□□□□ -1.36
NPLOC4-204ENST00000570324 C11orf68Q9H3H3 251 aaKnown RBP6.54□□□□□ -1.36
NPLOC4-204ENST00000570324 NUDT15Q9NV35 164 aa6.54□□□□□ -1.36
NPLOC4-204ENST00000570324 HSPB7Q9UBY9 170 aa6.54□□□□□ -1.36
NPLOC4-204ENST00000570324 BOLA1Q9Y3E2 137 aa6.54□□□□□ -1.36
NPLOC4-204ENST00000570324 DYNC2H1Q8NCM8 4307 aaKnown RBP6.54□□□□□ -1.36
NPLOC4-204ENST00000570324 DNAH7Q8WXX0 4024 aa6.53□□□□□ -1.36
NPLOC4-204ENST00000570324 PSG1P11464 419 aa6.53□□□□□ -1.36
NPLOC4-204ENST00000570324 USF2Q15853 346 aaPredicted RBP6.53□□□□□ -1.36
NPLOC4-204ENST00000570324 TMEM128Q5BJH2 165 aa6.53□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms