RNA–Protein interactions for RNA: ENST00000569950.1

VPS35-211, Transcript of VPS35, retromer complex component, humanhuman

TSL 5

Gene VPS35, Length 1,096 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS35-211ENST00000569950 NUPL2O15504 423 aaKnown RBP7.02□□□□□ -1.29
VPS35-211ENST00000569950 ZNF207O43670 478 aaKnown RBP7.02□□□□□ -1.29
VPS35-211ENST00000569950 IGLV1-51P01701 117 aa7.02□□□□□ -1.29
VPS35-211ENST00000569950 ELLP55199 621 aaPredicted RBP7.02□□□□□ -1.29
VPS35-211ENST00000569950 PRR20EP86478 221 aa7.02□□□□□ -1.29
VPS35-211ENST00000569950 PRR20CP86479 221 aa7.02□□□□□ -1.29
VPS35-211ENST00000569950 PRR20DP86480 221 aa7.02□□□□□ -1.29
VPS35-211ENST00000569950 PRR20BP86481 221 aa7.02□□□□□ -1.29
VPS35-211ENST00000569950 PRR20AP86496 221 aa7.02□□□□□ -1.29
VPS35-211ENST00000569950 FGL1Q08830 312 aa7.02□□□□□ -1.29
VPS35-211ENST00000569950 CLINT1Q14677 625 aa7.02□□□□□ -1.29
VPS35-211ENST00000569950 OPCMLQ14982 345 aa7.02□□□□□ -1.29
VPS35-211ENST00000569950 OXLD1Q5BKU9 147 aa7.02□□□□□ -1.29
VPS35-211ENST00000569950 KPRPQ5T749 579 aaPredicted RBP7.02□□□□□ -1.29
VPS35-211ENST00000569950 PATE2Q6UY27 113 aa7.02□□□□□ -1.29
VPS35-211ENST00000569950 ZNF546Q86UE3 836 aa7.02□□□□□ -1.29
VPS35-211ENST00000569950 STX12Q86Y82 276 aa7.02□□□□□ -1.29
VPS35-211ENST00000569950 C17orf77Q96MU5 243 aa7.02□□□□□ -1.29
VPS35-211ENST00000569950 GGTLC1Q9BX51 225 aa7.02□□□□□ -1.29
VPS35-211ENST00000569950 SLC25A31Q9H0C2 315 aa7.02□□□□□ -1.29
VPS35-211ENST00000569950 CYTL1Q9NRR1 136 aa7.02□□□□□ -1.29
VPS35-211ENST00000569950 UQCC1Q9NVA1 299 aa7.02□□□□□ -1.29
VPS35-211ENST00000569950 FBXL17Q9UF56 701 aa7.02□□□□□ -1.29
VPS35-211ENST00000569950 MLXQ9UH92 298 aa7.02□□□□□ -1.29
VPS35-211ENST00000569950 SELENOKQ9Y6D0 94 aa7.02□□□□□ -1.29
VPS35-211ENST00000569950 FXYD6-FXYD2A0A087WZ82 144 aa7.01□□□□□ -1.29
VPS35-211ENST00000569950 UBE2L5PA0A1B0GUS4 154 aa7.01□□□□□ -1.29
VPS35-211ENST00000569950 ZFP92A6NM28 416 aa7.01□□□□□ -1.29
VPS35-211ENST00000569950 HMSDA8MTL9 139 aa7.01□□□□□ -1.29
VPS35-211ENST00000569950 SEC14L6B5MCN3 397 aa7.01□□□□□ -1.29
VPS35-211ENST00000569950 RD3LP0DJH9 198 aa7.01□□□□□ -1.29
VPS35-211ENST00000569950 FOLR2P14207 255 aa7.01□□□□□ -1.29
VPS35-211ENST00000569950 CBLN1P23435 193 aa7.01□□□□□ -1.29
VPS35-211ENST00000569950 CRYBB3P26998 211 aa7.01□□□□□ -1.29
VPS35-211ENST00000569950 PLP1P60201 277 aa7.01□□□□□ -1.29
VPS35-211ENST00000569950 KRTAP10-11P60412 298 aa7.01□□□□□ -1.29
VPS35-211ENST00000569950 AKR1C1Q04828 323 aa7.01□□□□□ -1.29
VPS35-211ENST00000569950 RELQ04864 619 aaPredicted RBP7.01□□□□□ -1.29
VPS35-211ENST00000569950 EGFEM1PQ0D2K5 195 aa7.01□□□□□ -1.29
VPS35-211ENST00000569950 OR2F1Q13607 317 aa7.01□□□□□ -1.29
VPS35-211ENST00000569950 ATP6V1FQ16864 119 aa7.01□□□□□ -1.29
VPS35-211ENST00000569950 LAMTOR1Q6IAA8 161 aa7.01□□□□□ -1.29
VPS35-211ENST00000569950 TEPPQ6URK8 271 aa7.01□□□□□ -1.29
VPS35-211ENST00000569950 BTNL8Q6UX41 500 aa7.01□□□□□ -1.29
VPS35-211ENST00000569950 CYP2G1PQ6ZSU1 146 aa7.01□□□□□ -1.29
VPS35-211ENST00000569950 ATP5SQ99766 215 aa7.01□□□□□ -1.29
VPS35-211ENST00000569950 SMIM3Q9BZL3 60 aa7.01□□□□□ -1.29
VPS35-211ENST00000569950 WDR61Q9GZS3 305 aaKnown RBP7.01□□□□□ -1.29
VPS35-211ENST00000569950 VSIRQ9H7M9 311 aa7.01□□□□□ -1.29
VPS35-211ENST00000569950 DAZ1Q9NQZ3 744 aaKnown RBP7.01□□□□□ -1.29
VPS35-211ENST00000569950 MRPL27Q9P0M9 148 aaKnown RBP7.01□□□□□ -1.29
VPS35-211ENST00000569950 COL7A1Q02388 2944 aa7□□□□□ -1.29
VPS35-211ENST00000569950 IGHV3OR16-13A0A075B7E8 117 aa7□□□□□ -1.29
VPS35-211ENST00000569950 IGHV3-74A0A0B4J1X5 117 aa7□□□□□ -1.29
VPS35-211ENST00000569950 IGHV7-4-1A0A0J9YVY3 117 aa7□□□□□ -1.29
VPS35-211ENST00000569950 ZNF320A2RRD8 509 aa7□□□□□ -1.29
VPS35-211ENST00000569950 SMCO3A2RU48 225 aa7□□□□□ -1.29
VPS35-211ENST00000569950 CHEK1O14757 476 aa7□□□□□ -1.29
VPS35-211ENST00000569950 ARPC5O15511 151 aa7□□□□□ -1.29
VPS35-211ENST00000569950 YIF1AO95070 293 aa7□□□□□ -1.29
VPS35-211ENST00000569950 C1QBP02746 253 aa7□□□□□ -1.29
VPS35-211ENST00000569950 IL4P05112 153 aa7□□□□□ -1.29
VPS35-211ENST00000569950 CD33P20138 364 aa7□□□□□ -1.29
VPS35-211ENST00000569950 HBG1P69891 147 aa7□□□□□ -1.29
VPS35-211ENST00000569950 HBG2P69892 147 aa7□□□□□ -1.29
VPS35-211ENST00000569950 BEAN1Q3B7T3 259 aa7□□□□□ -1.29
VPS35-211ENST00000569950 FAM106AQ4KMX7 169 aa7□□□□□ -1.29
VPS35-211ENST00000569950 FAM90A2PQ658T7 463 aa7□□□□□ -1.29
VPS35-211ENST00000569950 AKAP14Q86UN6 197 aa7□□□□□ -1.29
VPS35-211ENST00000569950 KCNRGQ8N5I3 272 aa7□□□□□ -1.29
VPS35-211ENST00000569950 OR51G1Q8NGK1 321 aa7□□□□□ -1.29
VPS35-211ENST00000569950 TMEM37Q8WXS4 190 aa7□□□□□ -1.29
VPS35-211ENST00000569950 ST8SIA2Q92186 375 aa7□□□□□ -1.29
VPS35-211ENST00000569950 RNF125Q96EQ8 232 aa7□□□□□ -1.29
VPS35-211ENST00000569950 NPCDR1Q9BY65 106 aa7□□□□□ -1.29
VPS35-211ENST00000569950 PARD6GQ9BYG4 376 aaPredicted RBP7□□□□□ -1.29
VPS35-211ENST00000569950 SMPXQ9UHP9 88 aa7□□□□□ -1.29
VPS35-211ENST00000569950 TENM3Q9P273 2699 aa6.99□□□□□ -1.29
VPS35-211ENST00000569950 IGHV3-49A0A0A0MS15 119 aa6.99□□□□□ -1.29
VPS35-211ENST00000569950 ZNF785A8K8V0 405 aa6.99□□□□□ -1.29
VPS35-211ENST00000569950 BUB3O43684 328 aa6.99□□□□□ -1.29
VPS35-211ENST00000569950 FGF7P21781 194 aa6.99□□□□□ -1.29
VPS35-211ENST00000569950 CAMLGP49069 296 aa6.99□□□□□ -1.29
VPS35-211ENST00000569950 ZNF345Q14585 488 aa6.99□□□□□ -1.29
VPS35-211ENST00000569950 DEFB114Q30KQ6 69 aa6.99□□□□□ -1.29
VPS35-211ENST00000569950 LGALSLQ3ZCW2 172 aaPredicted RBP6.99□□□□□ -1.29
VPS35-211ENST00000569950 GCSAMLQ5JQS6 135 aa6.99□□□□□ -1.29
VPS35-211ENST00000569950 MORN5Q5VZ52 161 aa6.99□□□□□ -1.29
VPS35-211ENST00000569950 MIC13Q5XKP0 118 aa6.99□□□□□ -1.29
VPS35-211ENST00000569950 RSG1Q9BU20 258 aa6.99□□□□□ -1.29
VPS35-211ENST00000569950 C20orf24Q9BUV8 137 aa6.99□□□□□ -1.29
VPS35-211ENST00000569950 ARV1Q9H2C2 271 aa6.99□□□□□ -1.29
VPS35-211ENST00000569950 UFC1Q9Y3C8 167 aa6.99□□□□□ -1.29
VPS35-211ENST00000569950 MRPS12O15235 138 aaKnown RBP6.98□□□□□ -1.29
VPS35-211ENST00000569950 SAP30O75446 220 aa6.98□□□□□ -1.29
VPS35-211ENST00000569950 RPL29P47914 159 aaKnown RBP6.98□□□□□ -1.29
VPS35-211ENST00000569950 CD300EQ496F6 205 aaPredicted RBP6.98□□□□□ -1.29
VPS35-211ENST00000569950 C9orf66Q5T8R8 295 aa6.98□□□□□ -1.29
VPS35-211ENST00000569950 RPL7L1Q6DKI1 246 aaKnown RBP6.98□□□□□ -1.29
VPS35-211ENST00000569950 C16orf54Q6UWD8 224 aa6.98□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 133.9 ms