RNA–Protein interactions for RNA: ENST00000568877.5

COMMD4-224, Transcript of COMM domain containing 4, humanhuman

TSL 2

Gene COMMD4, Length 770 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-224ENST00000568877 A0A1B0GVG6 124 aa12.71□□□□□ -0.37
COMMD4-224ENST00000568877 WIPF1O43516 503 aa12.71□□□□□ -0.37
COMMD4-224ENST00000568877 C8orf88P0DMB2 117 aa12.71□□□□□ -0.37
COMMD4-224ENST00000568877 OR2F1Q13607 317 aa12.71□□□□□ -0.37
COMMD4-224ENST00000568877 CLINT1Q14677 625 aa12.71□□□□□ -0.37
COMMD4-224ENST00000568877 CYP2G1PQ6ZSU1 146 aa12.71□□□□□ -0.37
COMMD4-224ENST00000568877 ZNF546Q86UE3 836 aa12.71□□□□□ -0.37
COMMD4-224ENST00000568877 OR51G1Q8NGK1 321 aa12.71□□□□□ -0.37
COMMD4-224ENST00000568877 AQP10Q96PS8 301 aa12.71□□□□□ -0.37
COMMD4-224ENST00000568877 WDR83OSQ9Y284 106 aa12.71□□□□□ -0.37
COMMD4-224ENST00000568877 UBE2L5PA0A1B0GUS4 154 aa12.7□□□□□ -0.38
COMMD4-224ENST00000568877 WI2-2373I1.2A0A1W2PRP0 233 aa12.7□□□□□ -0.38
COMMD4-224ENST00000568877 IL4P05112 153 aa12.7□□□□□ -0.38
COMMD4-224ENST00000568877 TMEM182Q6ZP80 229 aaPredicted RBP12.7□□□□□ -0.38
COMMD4-224ENST00000568877 INO80EQ8NBZ0 244 aaPredicted RBP12.7□□□□□ -0.38
COMMD4-224ENST00000568877 ST6GAL2Q96JF0 529 aa12.7□□□□□ -0.38
COMMD4-224ENST00000568877 TNFSF18Q9UNG2 199 aa12.7□□□□□ -0.38
COMMD4-224ENST00000568877 IGHV7-4-1A0A0J9YVY3 117 aa12.69□□□□□ -0.38
COMMD4-224ENST00000568877 AGPAT2O15120 278 aa12.69□□□□□ -0.38
COMMD4-224ENST00000568877 CFDP00746 253 aaPredicted RBP12.69□□□□□ -0.38
COMMD4-224ENST00000568877 IGLV1-51P01701 117 aa12.69□□□□□ -0.38
COMMD4-224ENST00000568877 NPPCP23582 126 aa12.69□□□□□ -0.38
COMMD4-224ENST00000568877 GATA2P23769 480 aaPredicted RBP12.69□□□□□ -0.38
COMMD4-224ENST00000568877 SELENOTP62341 195 aa12.69□□□□□ -0.38
COMMD4-224ENST00000568877 RAB31Q13636 194 aa12.69□□□□□ -0.38
COMMD4-224ENST00000568877 USF2Q15853 346 aaPredicted RBP12.69□□□□□ -0.38
COMMD4-224ENST00000568877 BTNL8Q6UX41 500 aa12.69□□□□□ -0.38
COMMD4-224ENST00000568877 BPIFCQ8NFQ6 507 aa12.69□□□□□ -0.38
COMMD4-224ENST00000568877 DYNLRB2Q8TF09 96 aa12.69□□□□□ -0.38
COMMD4-224ENST00000568877 RNF125Q96EQ8 232 aa12.69□□□□□ -0.38
COMMD4-224ENST00000568877 METTL26Q96S19 204 aa12.69□□□□□ -0.38
COMMD4-224ENST00000568877 MGST2Q99735 147 aa12.69□□□□□ -0.38
COMMD4-224ENST00000568877 ATP5SQ99766 215 aa12.69□□□□□ -0.38
COMMD4-224ENST00000568877 SMIM3Q9BZL3 60 aa12.69□□□□□ -0.38
COMMD4-224ENST00000568877 SMPXQ9UHP9 88 aa12.69□□□□□ -0.38
COMMD4-224ENST00000568877 DFFBO76075 338 aa12.68□□□□□ -0.38
COMMD4-224ENST00000568877 FGF7P21781 194 aa12.68□□□□□ -0.38
COMMD4-224ENST00000568877 DEFB114Q30KQ6 69 aa12.68□□□□□ -0.38
COMMD4-224ENST00000568877 TECRQ9NZ01 308 aaKnown RBP12.68□□□□□ -0.38
COMMD4-224ENST00000568877 MLXQ9UH92 298 aa12.68□□□□□ -0.38
COMMD4-224ENST00000568877 SLC45A2Q9UMX9 530 aa12.68□□□□□ -0.38
COMMD4-224ENST00000568877 IGHV3-49A0A0A0MS15 119 aa12.67□□□□□ -0.38
COMMD4-224ENST00000568877 RNF222A6NCQ9 220 aa12.67□□□□□ -0.38
COMMD4-224ENST00000568877 MPDU1O75352 247 aa12.67□□□□□ -0.38
COMMD4-224ENST00000568877 CRYBB3P26998 211 aa12.67□□□□□ -0.38
COMMD4-224ENST00000568877 CAMLGP49069 296 aa12.67□□□□□ -0.38
COMMD4-224ENST00000568877 LYZP61626 148 aa12.67□□□□□ -0.38
COMMD4-224ENST00000568877 TCTE3Q8IZS6 198 aa12.67□□□□□ -0.38
COMMD4-224ENST00000568877 PBDC1Q9BVG4 233 aa12.67□□□□□ -0.38
COMMD4-224ENST00000568877 RHPN1-AS1Q9BWJ2 59 aa12.67□□□□□ -0.38
COMMD4-224ENST00000568877 FBXL17Q9UF56 701 aa12.67□□□□□ -0.38
COMMD4-224ENST00000568877 RABAC1Q9UI14 185 aa12.67□□□□□ -0.38
COMMD4-224ENST00000568877 IGHV3OR16-13A0A075B7E8 117 aa12.66□□□□□ -0.38
COMMD4-224ENST00000568877 IGHV3-74A0A0B4J1X5 117 aa12.66□□□□□ -0.38
COMMD4-224ENST00000568877 CHEK1O14757 476 aa12.66□□□□□ -0.38
COMMD4-224ENST00000568877 ARPC5O15511 151 aa12.66□□□□□ -0.38
COMMD4-224ENST00000568877 APOHP02749 345 aaPredicted RBP12.66□□□□□ -0.38
COMMD4-224ENST00000568877 HNRNPCP07910 306 aaKnown RBP eCLIP12.66□□□□□ -0.38
COMMD4-224ENST00000568877 LINC00869P0C866 280 aa12.66□□□□□ -0.38
COMMD4-224ENST00000568877 BMI1P35226 326 aa12.66□□□□□ -0.38
COMMD4-224ENST00000568877 EGFEM1PQ0D2K5 195 aa12.66□□□□□ -0.38
COMMD4-224ENST00000568877 CD300EQ496F6 205 aaPredicted RBP12.66□□□□□ -0.38
COMMD4-224ENST00000568877 KPRPQ5T749 579 aaPredicted RBP12.66□□□□□ -0.38
COMMD4-224ENST00000568877 AKAP14Q86UN6 197 aa12.66□□□□□ -0.38
COMMD4-224ENST00000568877 OR11H4Q8NGC9 324 aa12.66□□□□□ -0.38
COMMD4-224ENST00000568877 OR2K2Q8NGT1 345 aa12.66□□□□□ -0.38
COMMD4-224ENST00000568877 NARS2Q96I59 477 aaKnown RBP12.66□□□□□ -0.38
COMMD4-224ENST00000568877 GGTLC1Q9BX51 225 aa12.66□□□□□ -0.38
COMMD4-224ENST00000568877 WDR61Q9GZS3 305 aaKnown RBP12.66□□□□□ -0.38
COMMD4-224ENST00000568877 WFDC1Q9HC57 220 aa12.66□□□□□ -0.38
COMMD4-224ENST00000568877 SELENOKQ9Y6D0 94 aa12.66□□□□□ -0.38
COMMD4-224ENST00000568877 U3KQE9 123 aa12.66□□□□□ -0.38
COMMD4-224ENST00000568877 A0A1W2PS18 150 aa12.65□□□□□ -0.38
COMMD4-224ENST00000568877 HMSDA8MTL9 139 aa12.65□□□□□ -0.38
COMMD4-224ENST00000568877 IFNA5P01569 189 aa12.65□□□□□ -0.38
COMMD4-224ENST00000568877 ORM2P19652 201 aa12.65□□□□□ -0.38
COMMD4-224ENST00000568877 AP2S1P53680 142 aaPredicted RBP12.65□□□□□ -0.38
COMMD4-224ENST00000568877 BEAN1Q3B7T3 259 aa12.65□□□□□ -0.38
COMMD4-224ENST00000568877 ST8SIA2Q92186 375 aa12.65□□□□□ -0.38
COMMD4-224ENST00000568877 NPCDR1Q9BY65 106 aa12.65□□□□□ -0.38
COMMD4-224ENST00000568877 MFFQ9GZY8 342 aa12.65□□□□□ -0.38
COMMD4-224ENST00000568877 VSIRQ9H7M9 311 aa12.65□□□□□ -0.38
COMMD4-224ENST00000568877 ZMAT5Q9UDW3 170 aaKnown RBP12.65□□□□□ -0.38
COMMD4-224ENST00000568877 IGHV3-66A0A0C4DH42 116 aa12.64□□□□□ -0.39
COMMD4-224ENST00000568877 RPL29P47914 159 aaKnown RBP12.64□□□□□ -0.39
COMMD4-224ENST00000568877 EIF2B2P49770 351 aaKnown RBP12.64□□□□□ -0.39
COMMD4-224ENST00000568877 PLP1P60201 277 aa12.64□□□□□ -0.39
COMMD4-224ENST00000568877 KRTAP10-11P60412 298 aa12.64□□□□□ -0.39
COMMD4-224ENST00000568877 OPCMLQ14982 345 aa12.64□□□□□ -0.39
COMMD4-224ENST00000568877 MIC13Q5XKP0 118 aa12.64□□□□□ -0.39
COMMD4-224ENST00000568877 LCN12Q6JVE5 192 aa12.64□□□□□ -0.39
COMMD4-224ENST00000568877 OR1B1Q8NGR6 318 aa12.64□□□□□ -0.39
COMMD4-224ENST00000568877 SCGB1C1Q8TD33 95 aa12.64□□□□□ -0.39
COMMD4-224ENST00000568877 RNF2Q99496 336 aa12.64□□□□□ -0.39
COMMD4-224ENST00000568877 TMEM231Q9H6L2 316 aa12.64□□□□□ -0.39
COMMD4-224ENST00000568877 PFDN2Q9UHV9 154 aa12.64□□□□□ -0.39
COMMD4-224ENST00000568877 IZUMO1RA6ND01 250 aa12.63□□□□□ -0.39
COMMD4-224ENST00000568877 HYPMO75409 117 aa12.63□□□□□ -0.39
COMMD4-224ENST00000568877 PRR20EP86478 221 aa12.63□□□□□ -0.39
COMMD4-224ENST00000568877 PRR20CP86479 221 aa12.63□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms