RNA–Protein interactions for RNA: ENST00000567805.5

CLK3-219, Transcript of CDC like kinase 3, humanhuman

TSL 3

Gene CLK3, Length 327 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-219ENST00000567805 LYZL2Q7Z4W2 148 aa3.53□□□□□ -1.84
CLK3-219ENST00000567805 TMED4Q7Z7H5 227 aa3.53□□□□□ -1.84
CLK3-219ENST00000567805 LYG2Q86SG7 212 aa3.53□□□□□ -1.84
CLK3-219ENST00000567805 GBGT1Q8N5D6 347 aa3.53□□□□□ -1.84
CLK3-219ENST00000567805 TMEM217Q8N7C4 229 aa3.53□□□□□ -1.84
CLK3-219ENST00000567805 OR1S2Q8NGQ3 325 aa3.53□□□□□ -1.84
CLK3-219ENST00000567805 DTD1Q8TEA8 209 aa3.53□□□□□ -1.84
CLK3-219ENST00000567805 Q8WTZ3 238 aa3.53□□□□□ -1.84
CLK3-219ENST00000567805 RNF141Q8WVD5 230 aa3.53□□□□□ -1.84
CLK3-219ENST00000567805 TMEM170AQ8WVE7 144 aa3.53□□□□□ -1.84
CLK3-219ENST00000567805 RNF183Q96D59 192 aa3.53□□□□□ -1.84
CLK3-219ENST00000567805 GRAMD2BQ96HH9 432 aa3.53□□□□□ -1.84
CLK3-219ENST00000567805 SLC25A21Q9BQT8 299 aaPredicted RBP3.53□□□□□ -1.84
CLK3-219ENST00000567805 MRPL18Q9H0U6 180 aaKnown RBP3.53□□□□□ -1.84
CLK3-219ENST00000567805 RBM38Q9H0Z9 239 aaKnown RBP3.53□□□□□ -1.84
CLK3-219ENST00000567805 CSTL1Q9H114 145 aa3.53□□□□□ -1.84
CLK3-219ENST00000567805 PRR13Q9NZ81 148 aa3.53□□□□□ -1.84
CLK3-219ENST00000567805 V9GYH0 126 aa3.53□□□□□ -1.84
CLK3-219ENST00000567805 NUPR2A6NF83 97 aa3.52□□□□□ -1.85
CLK3-219ENST00000567805 HELTA6NFD8 242 aa3.52□□□□□ -1.85
CLK3-219ENST00000567805 FAM90A26D6RGX4 464 aa3.52□□□□□ -1.85
CLK3-219ENST00000567805 K7EQG2 157 aa3.52□□□□□ -1.85
CLK3-219ENST00000567805 TOMM40O96008 361 aa3.52□□□□□ -1.85
CLK3-219ENST00000567805 IFNA10P01566 189 aa3.52□□□□□ -1.85
CLK3-219ENST00000567805 IL4P05112 153 aa3.52□□□□□ -1.85
CLK3-219ENST00000567805 HNRNPCP07910 306 aaKnown RBP eCLIP3.52□□□□□ -1.85
CLK3-219ENST00000567805 SLC25A6P12236 298 aa3.52□□□□□ -1.85
CLK3-219ENST00000567805 GPX4P36969 197 aaPredicted RBP3.52□□□□□ -1.85
CLK3-219ENST00000567805 AP2S1P53680 142 aaPredicted RBP3.52□□□□□ -1.85
CLK3-219ENST00000567805 DEFB131AP59861 70 aa3.52□□□□□ -1.85
CLK3-219ENST00000567805 UBE2MP61081 183 aaKnown RBP3.52□□□□□ -1.85
CLK3-219ENST00000567805 RBMS2Q15434 407 aaKnown RBP3.52□□□□□ -1.85
CLK3-219ENST00000567805 TMEM41BQ5BJD5 291 aa3.52□□□□□ -1.85
CLK3-219ENST00000567805 SPANXN2Q5MJ10 180 aa3.52□□□□□ -1.85
CLK3-219ENST00000567805 CCDC190Q86UF4 302 aa3.52□□□□□ -1.85
CLK3-219ENST00000567805 STHQ8IWL8 128 aa3.52□□□□□ -1.85
CLK3-219ENST00000567805 LRTM2Q8N967 370 aa3.52□□□□□ -1.85
CLK3-219ENST00000567805 STXBP6Q8NFX7 210 aa3.52□□□□□ -1.85
CLK3-219ENST00000567805 OR1S1Q8NH92 325 aa3.52□□□□□ -1.85
CLK3-219ENST00000567805 DCANP1Q8TF63 244 aa3.52□□□□□ -1.85
CLK3-219ENST00000567805 GATAD1Q8WUU5 269 aa3.52□□□□□ -1.85
CLK3-219ENST00000567805 NPIPB3Q92617 1050 aa3.52□□□□□ -1.85
CLK3-219ENST00000567805 ACY3Q96HD9 319 aa3.52□□□□□ -1.85
CLK3-219ENST00000567805 KRTAP17-1Q9BYP8 105 aa3.52□□□□□ -1.85
CLK3-219ENST00000567805 RBKSQ9H477 322 aa3.52□□□□□ -1.85
CLK3-219ENST00000567805 RABAC1Q9UI14 185 aa3.52□□□□□ -1.85
CLK3-219ENST00000567805 TMED3Q9Y3Q3 217 aa3.52□□□□□ -1.85
CLK3-219ENST00000567805 U3KQE9 123 aa3.52□□□□□ -1.85
CLK3-219ENST00000567805 AGRNO00468 2067 aa3.51□□□□□ -1.85
CLK3-219ENST00000567805 CXorf65A6NEN9 183 aa3.51□□□□□ -1.85
CLK3-219ENST00000567805 NAP1L6A6NFF2 107 aa3.51□□□□□ -1.85
CLK3-219ENST00000567805 PITX3O75364 302 aa3.51□□□□□ -1.85
CLK3-219ENST00000567805 MED6O75586 246 aa3.51□□□□□ -1.85
CLK3-219ENST00000567805 SFT2D2O95562 160 aa3.51□□□□□ -1.85
CLK3-219ENST00000567805 CA1P00915 261 aaPredicted RBP3.51□□□□□ -1.85
CLK3-219ENST00000567805 IFNA4P05014 189 aa3.51□□□□□ -1.85
CLK3-219ENST00000567805 RD3LP0DJH9 198 aa3.51□□□□□ -1.85
CLK3-219ENST00000567805 SPP1P10451 314 aa3.51□□□□□ -1.85
CLK3-219ENST00000567805 PSG1P11464 419 aa3.51□□□□□ -1.85
CLK3-219ENST00000567805 NUP62P37198 522 aaPredicted RBP3.51□□□□□ -1.85
CLK3-219ENST00000567805 RAB11AP62491 216 aa3.51□□□□□ -1.85
CLK3-219ENST00000567805 RPP30P78346 268 aaKnown RBP3.51□□□□□ -1.85
CLK3-219ENST00000567805 EWSR1Q01844 656 aaKnown RBP eCLIP3.51□□□□□ -1.85
CLK3-219ENST00000567805 PPP1R1AQ13522 171 aa3.51□□□□□ -1.85
CLK3-219ENST00000567805 PMS2P11Q13670 270 aa3.51□□□□□ -1.85
CLK3-219ENST00000567805 USF2Q15853 346 aaPredicted RBP3.51□□□□□ -1.85
CLK3-219ENST00000567805 LEMD1Q68G75 181 aa3.51□□□□□ -1.85
CLK3-219ENST00000567805 C16orf54Q6UWD8 224 aa3.51□□□□□ -1.85
CLK3-219ENST00000567805 CENPSQ8N2Z9 138 aa3.51□□□□□ -1.85
CLK3-219ENST00000567805 FAM24BQ8N5W8 94 aa3.51□□□□□ -1.85
CLK3-219ENST00000567805 OR51G1Q8NGK1 321 aa3.51□□□□□ -1.85
CLK3-219ENST00000567805 GLMPQ8WWB7 406 aa3.51□□□□□ -1.85
CLK3-219ENST00000567805 RNF125Q96EQ8 232 aa3.51□□□□□ -1.85
CLK3-219ENST00000567805 CIB3Q96Q77 187 aaPredicted RBP3.51□□□□□ -1.85
CLK3-219ENST00000567805 RARRES2Q99969 163 aa3.51□□□□□ -1.85
CLK3-219ENST00000567805 SRRQ9GZT4 340 aa3.51□□□□□ -1.85
CLK3-219ENST00000567805 C11orf68Q9H3H3 251 aaKnown RBP3.51□□□□□ -1.85
CLK3-219ENST00000567805 SEPSECSQ9HD40 501 aaKnown RBP3.51□□□□□ -1.85
CLK3-219ENST00000567805 FRAS1Q86XX4 4008 aa3.51□□□□□ -1.85
CLK3-219ENST00000567805 IGKV1D-37A0A075B6S9 117 aa3.5□□□□□ -1.85
CLK3-219ENST00000567805 ZFP92A6NM28 416 aa3.5□□□□□ -1.85
CLK3-219ENST00000567805 CENPXA8MT69 81 aa3.5□□□□□ -1.85
CLK3-219ENST00000567805 BUB3O43684 328 aa3.5□□□□□ -1.85
CLK3-219ENST00000567805 SYNGR2O43760 224 aa3.5□□□□□ -1.85
CLK3-219ENST00000567805 FABP1P07148 127 aa3.5□□□□□ -1.85
CLK3-219ENST00000567805 HOXB5P09067 269 aa3.5□□□□□ -1.85
CLK3-219ENST00000567805 ZNF688P0C7X2 276 aa3.5□□□□□ -1.85
CLK3-219ENST00000567805 IAPPP10997 89 aa3.5□□□□□ -1.85
CLK3-219ENST00000567805 INPP1P49441 399 aa3.5□□□□□ -1.85
CLK3-219ENST00000567805 SNRPD3P62318 126 aaKnown RBP3.5□□□□□ -1.85
CLK3-219ENST00000567805 DHRS2Q13268 280 aa3.5□□□□□ -1.85
CLK3-219ENST00000567805 GAMTQ14353 236 aa3.5□□□□□ -1.85
CLK3-219ENST00000567805 BAK1Q16611 211 aa3.5□□□□□ -1.85
CLK3-219ENST00000567805 TRIQKQ629K1 86 aa3.5□□□□□ -1.85
CLK3-219ENST00000567805 OR8G2PQ6IF36 304 aa3.5□□□□□ -1.85
CLK3-219ENST00000567805 MORN3Q6PF18 240 aaPredicted RBP3.5□□□□□ -1.85
CLK3-219ENST00000567805 CEMP1Q6PRD7 247 aaPredicted RBP3.5□□□□□ -1.85
CLK3-219ENST00000567805 SIGLEC15Q6ZMC9 328 aa3.5□□□□□ -1.85
CLK3-219ENST00000567805 TRPT1Q86TN4 253 aaKnown RBP3.5□□□□□ -1.85
CLK3-219ENST00000567805 OR11H2Q8NH07 326 aa3.5□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 112.2 ms