RNA–Protein interactions for RNA: ENST00000567635.5

SF3B3-209, Transcript of splicing factor 3b subunit 3, human

TSL 5

Gene SF3B3, Length 630 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SF3B3-209	ENST00000567635	RRAS2	P62070	204 aa	Predicted RBP	5.14	□□□□□ -1.59
SF3B3-209	ENST00000567635	PAFAH1B2	P68402	229 aa		5.14	□□□□□ -1.59
SF3B3-209	ENST00000567635	BTN1A1	Q13410	526 aa		5.14	□□□□□ -1.59
SF3B3-209	ENST00000567635	TMEM187	Q14656	261 aa		5.14	□□□□□ -1.59
SF3B3-209	ENST00000567635	RBMS2	Q15434	407 aa	Known RBP	5.14	□□□□□ -1.59
SF3B3-209	ENST00000567635	BSX	Q3C1V8	233 aa		5.14	□□□□□ -1.59
SF3B3-209	ENST00000567635	C2orf83	Q53S99	150 aa		5.14	□□□□□ -1.59
SF3B3-209	ENST00000567635	FAM90A2P	Q658T7	463 aa		5.14	□□□□□ -1.59
SF3B3-209	ENST00000567635	OR4X1	Q8NH49	305 aa		5.14	□□□□□ -1.59
SF3B3-209	ENST00000567635	ZNF431	Q8TF32	576 aa	Predicted RBP	5.14	□□□□□ -1.59
SF3B3-209	ENST00000567635	TMEM230	Q96A57	120 aa		5.14	□□□□□ -1.59
SF3B3-209	ENST00000567635	OVOL2	Q9BRP0	275 aa		5.14	□□□□□ -1.59
SF3B3-209	ENST00000567635	C20orf85	Q9H1P6	137 aa		5.14	□□□□□ -1.59
SF3B3-209	ENST00000567635	SAV1	Q9H4B6	383 aa	Predicted RBP	5.14	□□□□□ -1.59
SF3B3-209	ENST00000567635	FNDC4	Q9H6D8	234 aa	Predicted RBP	5.14	□□□□□ -1.59
SF3B3-209	ENST00000567635	PPP1R14D	Q9NXH3	145 aa		5.14	□□□□□ -1.59
SF3B3-209	ENST00000567635	FLVCR2	Q9UPI3	526 aa		5.14	□□□□□ -1.59
SF3B3-209	ENST00000567635	PUS1	Q9Y606	427 aa	Known RBP eCLIP	5.14	□□□□□ -1.59
SF3B3-209	ENST00000567635	IGKV3-7	A0A075B6H7	116 aa		5.13	□□□□□ -1.59
SF3B3-209	ENST00000567635	IGHV3OR16-13	A0A075B7E8	117 aa		5.13	□□□□□ -1.59
SF3B3-209	ENST00000567635	IGHV3-74	A0A0B4J1X5	117 aa		5.13	□□□□□ -1.59
SF3B3-209	ENST00000567635		A0A0B4J2A0	478 aa		5.13	□□□□□ -1.59
SF3B3-209	ENST00000567635	PIGBOS1	A0A0B4J2F0	54 aa		5.13	□□□□□ -1.59
SF3B3-209	ENST00000567635	KIR2DL5B	A0A0G2JN68	375 aa		5.13	□□□□□ -1.59
SF3B3-209	ENST00000567635	KIR2DL5B	A0A0G2JPC4	375 aa		5.13	□□□□□ -1.59
SF3B3-209	ENST00000567635		A0A1B0GU03	582 aa		5.13	□□□□□ -1.59
SF3B3-209	ENST00000567635	SNRPGP15	A8MWD9	76 aa		5.13	□□□□□ -1.59
SF3B3-209	ENST00000567635	WRB	O00258	174 aa		5.13	□□□□□ -1.59
SF3B3-209	ENST00000567635	S100A9	P06702	114 aa	Known RBP	5.13	□□□□□ -1.59
SF3B3-209	ENST00000567635	SLC25A4	P12235	298 aa		5.13	□□□□□ -1.59
SF3B3-209	ENST00000567635	ANXA3	P12429	323 aa		5.13	□□□□□ -1.59
SF3B3-209	ENST00000567635	TFPI2	P48307	235 aa		5.13	□□□□□ -1.59
SF3B3-209	ENST00000567635	AKR1D1	P51857	326 aa		5.13	□□□□□ -1.59
SF3B3-209	ENST00000567635	SUPT4H1	P63272	117 aa	Known RBP	5.13	□□□□□ -1.59
SF3B3-209	ENST00000567635	SRPX	P78539	464 aa		5.13	□□□□□ -1.59
SF3B3-209	ENST00000567635	ODF3L2	Q3SX64	289 aa		5.13	□□□□□ -1.59
SF3B3-209	ENST00000567635	NMS	Q5H8A3	153 aa		5.13	□□□□□ -1.59
SF3B3-209	ENST00000567635	ETFRF1	Q6IPR1	90 aa		5.13	□□□□□ -1.59
SF3B3-209	ENST00000567635		Q6ZWC4	215 aa		5.13	□□□□□ -1.59
SF3B3-209	ENST00000567635	TCF24	Q7RTU0	167 aa		5.13	□□□□□ -1.59
SF3B3-209	ENST00000567635	LYZL2	Q7Z4W2	148 aa		5.13	□□□□□ -1.59
SF3B3-209	ENST00000567635	KIR2DL5A	Q8N109	375 aa		5.13	□□□□□ -1.59
SF3B3-209	ENST00000567635	LGI3	Q8N145	548 aa		5.13	□□□□□ -1.59
SF3B3-209	ENST00000567635	GBGT1	Q8N5D6	347 aa		5.13	□□□□□ -1.59
SF3B3-209	ENST00000567635	STPG3	Q8N7X2	389 aa		5.13	□□□□□ -1.59
SF3B3-209	ENST00000567635	KIR2DL5B	Q8NHK3	375 aa		5.13	□□□□□ -1.59
SF3B3-209	ENST00000567635	RNASEH2C	Q8TDP1	164 aa	Known RBP	5.13	□□□□□ -1.59
SF3B3-209	ENST00000567635	MED28	Q9H204	178 aa		5.13	□□□□□ -1.59
SF3B3-209	ENST00000567635	TMEM231	Q9H6L2	316 aa		5.13	□□□□□ -1.59
SF3B3-209	ENST00000567635	VSIR	Q9H7M9	311 aa		5.13	□□□□□ -1.59
SF3B3-209	ENST00000567635	GPN1	Q9HCN4	374 aa	Predicted RBP	5.13	□□□□□ -1.59
SF3B3-209	ENST00000567635	BIN3	Q9NQY0	253 aa		5.13	□□□□□ -1.59
SF3B3-209	ENST00000567635	PRR13	Q9NZ81	148 aa		5.13	□□□□□ -1.59
SF3B3-209	ENST00000567635	MRPL36	Q9P0J6	103 aa	Known RBP	5.13	□□□□□ -1.59
SF3B3-209	ENST00000567635	SHPK	Q9UHJ6	478 aa		5.13	□□□□□ -1.59
SF3B3-209	ENST00000567635	PFDN2	Q9UHV9	154 aa		5.13	□□□□□ -1.59
SF3B3-209	ENST00000567635		A0A1W2PS18	150 aa		5.12	□□□□□ -1.59
SF3B3-209	ENST00000567635	DNASE2	O00115	360 aa	Predicted RBP	5.12	□□□□□ -1.59
SF3B3-209	ENST00000567635	SPRY2	O43597	315 aa		5.12	□□□□□ -1.59
SF3B3-209	ENST00000567635	DFFB	O76075	338 aa		5.12	□□□□□ -1.59
SF3B3-209	ENST00000567635	NXPH3	O95157	252 aa		5.12	□□□□□ -1.59
SF3B3-209	ENST00000567635	IFNA10	P01566	189 aa		5.12	□□□□□ -1.59
SF3B3-209	ENST00000567635	IGKV1-17	P01599	117 aa		5.12	□□□□□ -1.59
SF3B3-209	ENST00000567635	APOH	P02749	345 aa	Predicted RBP	5.12	□□□□□ -1.59
SF3B3-209	ENST00000567635	SMIM6	P0DI80	62 aa		5.12	□□□□□ -1.59
SF3B3-209	ENST00000567635	RPL35A	P18077	110 aa	Known RBP	5.12	□□□□□ -1.59
SF3B3-209	ENST00000567635	ANXA7	P20073	488 aa	Known RBP	5.12	□□□□□ -1.59
SF3B3-209	ENST00000567635	NPY1R	P25929	384 aa		5.12	□□□□□ -1.59
SF3B3-209	ENST00000567635	CRYBB3	P26998	211 aa		5.12	□□□□□ -1.59
SF3B3-209	ENST00000567635	RPL35	P42766	123 aa	Known RBP	5.12	□□□□□ -1.59
SF3B3-209	ENST00000567635	YPEL3	P61236	119 aa	Predicted RBP	5.12	□□□□□ -1.59
SF3B3-209	ENST00000567635	RPL11	P62913	178 aa	Known RBP	5.12	□□□□□ -1.59
SF3B3-209	ENST00000567635	TNFRSF9	Q07011	255 aa		5.12	□□□□□ -1.59
SF3B3-209	ENST00000567635	SMCO1	Q147U7	214 aa		5.12	□□□□□ -1.59
SF3B3-209	ENST00000567635	FCN2	Q15485	313 aa		5.12	□□□□□ -1.59
SF3B3-209	ENST00000567635	TIGIT	Q495A1	244 aa		5.12	□□□□□ -1.59
SF3B3-209	ENST00000567635	TMEM128	Q5BJH2	165 aa		5.12	□□□□□ -1.59
SF3B3-209	ENST00000567635	PRSS54	Q6PEW0	395 aa		5.12	□□□□□ -1.59
SF3B3-209	ENST00000567635	WFDC3	Q8IUB2	231 aa		5.12	□□□□□ -1.59
SF3B3-209	ENST00000567635	APRG1	Q8IVJ8	170 aa		5.12	□□□□□ -1.59
SF3B3-209	ENST00000567635	SLC24A4	Q8NFF2	622 aa		5.12	□□□□□ -1.59
SF3B3-209	ENST00000567635	OR1S2	Q8NGQ3	325 aa		5.12	□□□□□ -1.59
SF3B3-209	ENST00000567635		Q8WTZ3	238 aa		5.12	□□□□□ -1.59
SF3B3-209	ENST00000567635	ST8SIA2	Q92186	375 aa		5.12	□□□□□ -1.59
SF3B3-209	ENST00000567635	NARS2	Q96I59	477 aa	Known RBP	5.12	□□□□□ -1.59
SF3B3-209	ENST00000567635	METTL26	Q96S19	204 aa		5.12	□□□□□ -1.59
SF3B3-209	ENST00000567635	SEC22C	Q9BRL7	303 aa		5.12	□□□□□ -1.59
SF3B3-209	ENST00000567635	MS4A6A	Q9H2W1	248 aa		5.12	□□□□□ -1.59
SF3B3-209	ENST00000567635	RBKS	Q9H477	322 aa		5.12	□□□□□ -1.59
SF3B3-209	ENST00000567635	HSPB7	Q9UBY9	170 aa		5.12	□□□□□ -1.59
SF3B3-209	ENST00000567635	TP53TG1	Q9Y2A0	90 aa		5.12	□□□□□ -1.59
SF3B3-209	ENST00000567635	TRAV2	A0A0B4J234	112 aa		5.11	□□□□□ -1.59
SF3B3-209	ENST00000567635	IGHV3-66	A0A0C4DH42	116 aa		5.11	□□□□□ -1.59
SF3B3-209	ENST00000567635	LCE6A	A0A183	80 aa		5.11	□□□□□ -1.59
SF3B3-209	ENST00000567635	DUXB	A0A1W2PPF3	345 aa		5.11	□□□□□ -1.59
SF3B3-209	ENST00000567635	MPTX1	A8MV57	137 aa		5.11	□□□□□ -1.59
SF3B3-209	ENST00000567635	S100A8	P05109	93 aa		5.11	□□□□□ -1.59
SF3B3-209	ENST00000567635	FABP1	P07148	127 aa		5.11	□□□□□ -1.59
SF3B3-209	ENST00000567635	IGLC1	P0CG04	106 aa		5.11	□□□□□ -1.59
SF3B3-209	ENST00000567635	OR10J1	P30954	320 aa		5.11	□□□□□ -1.59

Retrieved 100 of 20,778 RNA–protein pairs in 83.3 ms