RNA–Protein interactions for RNA: ENST00000567071.5

CAPN3-216, Transcript of calpain 3, humanhuman

TSL 4

Gene CAPN3, Length 563 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-216ENST00000567071 ZNF257Q9Y2Q1 563 aa7.11□□□□□ -1.27
CAPN3-216ENST00000567071 AGRNO00468 2067 aa7.11□□□□□ -1.27
CAPN3-216ENST00000567071 TMEM50AO95807 157 aa7.1□□□□□ -1.27
CAPN3-216ENST00000567071 AMBPP02760 352 aa7.1□□□□□ -1.27
CAPN3-216ENST00000567071 REG1AP05451 166 aa7.1□□□□□ -1.27
CAPN3-216ENST00000567071 PET100P0DJ07 73 aa7.1□□□□□ -1.27
CAPN3-216ENST00000567071 FOLR2P14207 255 aa7.1□□□□□ -1.27
CAPN3-216ENST00000567071 AREGP15514 252 aa7.1□□□□□ -1.27
CAPN3-216ENST00000567071 PVALBP20472 110 aaPredicted RBP7.1□□□□□ -1.27
CAPN3-216ENST00000567071 ZFP69Q49AA0 526 aa7.1□□□□□ -1.27
CAPN3-216ENST00000567071 PRSS54Q6PEW0 395 aa7.1□□□□□ -1.27
CAPN3-216ENST00000567071 C19orf35Q6ZS72 473 aa7.1□□□□□ -1.27
CAPN3-216ENST00000567071 OR11H4Q8NGC9 324 aa7.1□□□□□ -1.27
CAPN3-216ENST00000567071 NDUFAF3Q9BU61 184 aa7.1□□□□□ -1.27
CAPN3-216ENST00000567071 C11orf1Q9H5F2 150 aa7.1□□□□□ -1.27
CAPN3-216ENST00000567071 PAIP2BQ9ULR5 123 aaKnown RBP7.1□□□□□ -1.27
CAPN3-216ENST00000567071 PLA2G2DQ9UNK4 145 aa7.1□□□□□ -1.27
CAPN3-216ENST00000567071 IGLC7A0M8Q6 106 aa7.09□□□□□ -1.27
CAPN3-216ENST00000567071 TEX22C9J3V5 150 aa7.09□□□□□ -1.27
CAPN3-216ENST00000567071 E5RGE8 158 aa7.09□□□□□ -1.27
CAPN3-216ENST00000567071 ARPC5O15511 151 aa7.09□□□□□ -1.27
CAPN3-216ENST00000567071 C1QBP02746 253 aa7.09□□□□□ -1.27
CAPN3-216ENST00000567071 RLN2P04090 185 aa7.09□□□□□ -1.27
CAPN3-216ENST00000567071 OR13C7P0DN81 318 aa7.09□□□□□ -1.27
CAPN3-216ENST00000567071 CAV2P51636 162 aa7.09□□□□□ -1.27
CAPN3-216ENST00000567071 NKX2-5P52952 324 aaPredicted RBP7.09□□□□□ -1.27
CAPN3-216ENST00000567071 PAX9P55771 341 aa7.09□□□□□ -1.27
CAPN3-216ENST00000567071 WT1-ASQ06250 92 aa7.09□□□□□ -1.27
CAPN3-216ENST00000567071 FGL1Q08830 312 aa7.09□□□□□ -1.27
CAPN3-216ENST00000567071 SPANXN5Q5MJ07 72 aa7.09□□□□□ -1.27
CAPN3-216ENST00000567071 ZNF343Q6P1L6 599 aa7.09□□□□□ -1.27
CAPN3-216ENST00000567071 ZNF562Q6V9R5 426 aa7.09□□□□□ -1.27
CAPN3-216ENST00000567071 SPATA12Q7Z6I5 190 aa7.09□□□□□ -1.27
CAPN3-216ENST00000567071 TMEM61Q8N0U2 210 aa7.09□□□□□ -1.27
CAPN3-216ENST00000567071 OR11H2Q8NH07 326 aa7.09□□□□□ -1.27
CAPN3-216ENST00000567071 RAB40CQ96S21 281 aa7.09□□□□□ -1.27
CAPN3-216ENST00000567071 HRH4Q9H3N8 390 aa7.09□□□□□ -1.27
CAPN3-216ENST00000567071 PSENENQ9NZ42 101 aa7.09□□□□□ -1.27
CAPN3-216ENST00000567071 HMCN2Q8NDA2 5059 aa7.09□□□□□ -1.27
CAPN3-216ENST00000567071 IGSF23A1L1A6 192 aa7.08□□□□□ -1.28
CAPN3-216ENST00000567071 FAM24AA6NFZ4 105 aa7.08□□□□□ -1.28
CAPN3-216ENST00000567071 C2orf70A6NJV1 201 aa7.08□□□□□ -1.28
CAPN3-216ENST00000567071 SCAF4O95104 1147 aaKnown RBP7.08□□□□□ -1.28
CAPN3-216ENST00000567071 TRBV12-3P01733 135 aa7.08□□□□□ -1.28
CAPN3-216ENST00000567071 HNRNPCP07910 306 aaKnown RBP eCLIP7.08□□□□□ -1.28
CAPN3-216ENST00000567071 EGR2P11161 476 aaPredicted RBP7.08□□□□□ -1.28
CAPN3-216ENST00000567071 RPL35AP18077 110 aaKnown RBP7.08□□□□□ -1.28
CAPN3-216ENST00000567071 FCGR2BP31994 310 aaPredicted RBP7.08□□□□□ -1.28
CAPN3-216ENST00000567071 ERHP84090 104 aaKnown RBP7.08□□□□□ -1.28
CAPN3-216ENST00000567071 OR2C3Q8N628 320 aa7.08□□□□□ -1.28
CAPN3-216ENST00000567071 SLC24A4Q8NFF2 622 aa7.08□□□□□ -1.28
CAPN3-216ENST00000567071 OR1L6Q8NGR2 347 aa7.08□□□□□ -1.28
CAPN3-216ENST00000567071 USMG5Q96IX5 58 aa7.08□□□□□ -1.28
CAPN3-216ENST00000567071 SMIM8Q96KF7 97 aa7.08□□□□□ -1.28
CAPN3-216ENST00000567071 CIB3Q96Q77 187 aaPredicted RBP7.08□□□□□ -1.28
CAPN3-216ENST00000567071 CACFD1Q9UGQ2 172 aa7.08□□□□□ -1.28
CAPN3-216ENST00000567071 C15orf62A8K5M9 175 aa7.07□□□□□ -1.28
CAPN3-216ENST00000567071 DEFB4AO15263 64 aa7.07□□□□□ -1.28
CAPN3-216ENST00000567071 TSC22D2O75157 780 aa7.07□□□□□ -1.28
CAPN3-216ENST00000567071 CST7O76096 145 aa7.07□□□□□ -1.28
CAPN3-216ENST00000567071 METTL15P1P0C7V9 234 aa7.07□□□□□ -1.28
CAPN3-216ENST00000567071 RNASE2P10153 161 aaKnown RBP7.07□□□□□ -1.28
CAPN3-216ENST00000567071 SLC25A4P12235 298 aa7.07□□□□□ -1.28
CAPN3-216ENST00000567071 NPY1RP25929 384 aa7.07□□□□□ -1.28
CAPN3-216ENST00000567071 HLA-DMBP28068 263 aa7.07□□□□□ -1.28
CAPN3-216ENST00000567071 SNCAP37840 140 aa7.07□□□□□ -1.28
CAPN3-216ENST00000567071 P2RY1P47900 373 aa7.07□□□□□ -1.28
CAPN3-216ENST00000567071 EIF2B2P49770 351 aaKnown RBP7.07□□□□□ -1.28
CAPN3-216ENST00000567071 AP2S1P53680 142 aaPredicted RBP7.07□□□□□ -1.28
CAPN3-216ENST00000567071 RBPMS2Q6ZRY4 209 aaKnown RBP7.07□□□□□ -1.28
CAPN3-216ENST00000567071 ZNF546Q86UE3 836 aa7.07□□□□□ -1.28
CAPN3-216ENST00000567071 NOXA1Q86UR1 476 aa7.07□□□□□ -1.28
CAPN3-216ENST00000567071 OR5T1Q8NG75 326 aa7.07□□□□□ -1.28
CAPN3-216ENST00000567071 TMEM170AQ8WVE7 144 aa7.07□□□□□ -1.28
CAPN3-216ENST00000567071 LYRM2Q9NU23 88 aaPredicted RBP7.07□□□□□ -1.28
CAPN3-216ENST00000567071 TNFSF18Q9UNG2 199 aa7.07□□□□□ -1.28
CAPN3-216ENST00000567071 STRAPQ9Y3F4 350 aaKnown RBP7.07□□□□□ -1.28
CAPN3-216ENST00000567071 RNF222A6NCQ9 220 aa7.06□□□□□ -1.28
CAPN3-216ENST00000567071 PRH1P02810 166 aa7.06□□□□□ -1.28
CAPN3-216ENST00000567071 RPL12P30050 165 aaKnown RBP7.06□□□□□ -1.28
CAPN3-216ENST00000567071 ADMP35318 185 aa7.06□□□□□ -1.28
CAPN3-216ENST00000567071 NUP62P37198 522 aaPredicted RBP7.06□□□□□ -1.28
CAPN3-216ENST00000567071 HTR2BP41595 481 aa7.06□□□□□ -1.28
CAPN3-216ENST00000567071 TAS2R30P59541 319 aa7.06□□□□□ -1.28
CAPN3-216ENST00000567071 DEFA5Q01523 94 aa7.06□□□□□ -1.28
CAPN3-216ENST00000567071 OR8G2PQ6IF36 304 aa7.06□□□□□ -1.28
CAPN3-216ENST00000567071 Q6ZTC4 211 aa7.06□□□□□ -1.28
CAPN3-216ENST00000567071 HSD17B13Q7Z5P4 300 aaPredicted RBP7.06□□□□□ -1.28
CAPN3-216ENST00000567071 STX12Q86Y82 276 aa7.06□□□□□ -1.28
CAPN3-216ENST00000567071 TMEM252Q8N6L7 170 aa7.06□□□□□ -1.28
CAPN3-216ENST00000567071 INO80EQ8NBZ0 244 aaPredicted RBP7.06□□□□□ -1.28
CAPN3-216ENST00000567071 BSCL2Q96G97 398 aaPredicted RBP7.06□□□□□ -1.28
CAPN3-216ENST00000567071 HYLS1Q96M11 299 aa7.06□□□□□ -1.28
CAPN3-216ENST00000567071 SMIM3Q9BZL3 60 aa7.06□□□□□ -1.28
CAPN3-216ENST00000567071 MAP6D1Q9H9H5 199 aa7.06□□□□□ -1.28
CAPN3-216ENST00000567071 VPS13BQ7Z7G8 4022 aa7.06□□□□□ -1.28
CAPN3-216ENST00000567071 TRAV25A0A0B4J276 109 aa7.05□□□□□ -1.28
CAPN3-216ENST00000567071 NPIPB5A8MRT5 1133 aa7.05□□□□□ -1.28
CAPN3-216ENST00000567071 HMSDA8MTL9 139 aa7.05□□□□□ -1.28
CAPN3-216ENST00000567071 INS-IGF2F8WCM5 200 aa7.05□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 65.6 ms