RNA–Protein interactions for RNA: ENST00000566811.5

RNF40-210, Transcript of ring finger protein 40, humanhuman

TSL 2

Gene RNF40, Length 569 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-210ENST00000566811 TMEM147Q9BVK8 224 aa15.41■□□□□ 0.06
RNF40-210ENST00000566811 UQCC1Q9NVA1 299 aa15.41■□□□□ 0.06
RNF40-210ENST00000566811 SORL1Q92673 2214 aa15.4■□□□□ 0.06
RNF40-210ENST00000566811 IGKV1D-37A0A075B6S9 117 aa15.4■□□□□ 0.06
RNF40-210ENST00000566811 CCNKO75909 580 aa15.4■□□□□ 0.06
RNF40-210ENST00000566811 RAB31Q13636 194 aa15.4■□□□□ 0.06
RNF40-210ENST00000566811 TM4SF20Q53R12 229 aa15.4■□□□□ 0.06
RNF40-210ENST00000566811 HAPLN4Q86UW8 402 aa15.4■□□□□ 0.06
RNF40-210ENST00000566811 RNF126Q9BV68 326 aa15.4■□□□□ 0.06
RNF40-210ENST00000566811 IGKV1OR2-108A0A075B7D4 117 aa15.39■□□□□ 0.05
RNF40-210ENST00000566811 IGHV7-4-1A0A0J9YVY3 117 aa15.39■□□□□ 0.05
RNF40-210ENST00000566811 A0A1W2PS18 150 aa15.39■□□□□ 0.05
RNF40-210ENST00000566811 MPDU1O75352 247 aa15.39■□□□□ 0.05
RNF40-210ENST00000566811 IL4P05112 153 aa15.39■□□□□ 0.05
RNF40-210ENST00000566811 PSG1P11464 419 aa15.39■□□□□ 0.05
RNF40-210ENST00000566811 ARL16Q0P5N6 197 aa15.39■□□□□ 0.05
RNF40-210ENST00000566811 S100A7AQ86SG5 101 aa15.39■□□□□ 0.05
RNF40-210ENST00000566811 ZNF546Q86UE3 836 aa15.39■□□□□ 0.05
RNF40-210ENST00000566811 TMEM217Q8N7C4 229 aa15.39■□□□□ 0.05
RNF40-210ENST00000566811 BPIFCQ8NFQ6 507 aa15.39■□□□□ 0.05
RNF40-210ENST00000566811 RNF125Q96EQ8 232 aa15.39■□□□□ 0.05
RNF40-210ENST00000566811 SLC45A2Q9UMX9 530 aa15.39■□□□□ 0.05
RNF40-210ENST00000566811 TRAV25A0A0B4J276 109 aa15.38■□□□□ 0.05
RNF40-210ENST00000566811 NPPCP23582 126 aa15.38■□□□□ 0.05
RNF40-210ENST00000566811 Q6ZNX1 250 aa15.38■□□□□ 0.05
RNF40-210ENST00000566811 WDR89Q96FK6 387 aaPredicted RBP15.38■□□□□ 0.05
RNF40-210ENST00000566811 SMPXQ9UHP9 88 aa15.38■□□□□ 0.05
RNF40-210ENST00000566811 LSM4Q9Y4Z0 139 aaKnown RBP15.38■□□□□ 0.05
RNF40-210ENST00000566811 WI2-2373I1.2A0A1W2PRP0 233 aa15.37■□□□□ 0.05
RNF40-210ENST00000566811 CRYBB3P26998 211 aa15.37■□□□□ 0.05
RNF40-210ENST00000566811 RPL12P30050 165 aaKnown RBP15.37■□□□□ 0.05
RNF40-210ENST00000566811 DEFB114Q30KQ6 69 aa15.37■□□□□ 0.05
RNF40-210ENST00000566811 PXDC1Q5TGL8 231 aa15.37■□□□□ 0.05
RNF40-210ENST00000566811 LAMTOR1Q6IAA8 161 aa15.37■□□□□ 0.05
RNF40-210ENST00000566811 ADAMTSL5Q6ZMM2 481 aa15.37■□□□□ 0.05
RNF40-210ENST00000566811 CYP2G1PQ6ZSU1 146 aa15.37■□□□□ 0.05
RNF40-210ENST00000566811 OR5C1Q8NGR4 320 aa15.37■□□□□ 0.05
RNF40-210ENST00000566811 OR2T35Q8NGX2 323 aa15.37■□□□□ 0.05
RNF40-210ENST00000566811 GRAMD2BQ96HH9 432 aa15.37■□□□□ 0.05
RNF40-210ENST00000566811 RABAC1Q9UI14 185 aa15.37■□□□□ 0.05
RNF40-210ENST00000566811 ZNF256Q9Y2P7 627 aaPredicted RBP15.37■□□□□ 0.05
RNF40-210ENST00000566811 HSPB11Q9Y547 144 aa15.37■□□□□ 0.05
RNF40-210ENST00000566811 DFFBO76075 338 aa15.36■□□□□ 0.05
RNF40-210ENST00000566811 HNRNPCP07910 306 aaKnown RBP eCLIP15.36■□□□□ 0.05
RNF40-210ENST00000566811 ZNF90Q03938 601 aa15.36■□□□□ 0.05
RNF40-210ENST00000566811 RNF24Q9Y225 148 aa15.36■□□□□ 0.05
RNF40-210ENST00000566811 WDR83OSQ9Y284 106 aa15.36■□□□□ 0.05
RNF40-210ENST00000566811 EIF2B2P49770 351 aaKnown RBP15.35■□□□□ 0.05
RNF40-210ENST00000566811 BTNL8Q6UX41 500 aa15.35■□□□□ 0.05
RNF40-210ENST00000566811 CHAC2Q8WUX2 184 aa15.35■□□□□ 0.05
RNF40-210ENST00000566811 AQP10Q96PS8 301 aa15.35■□□□□ 0.05
RNF40-210ENST00000566811 RHPN1-AS1Q9BWJ2 59 aa15.35■□□□□ 0.05
RNF40-210ENST00000566811 VSIRQ9H7M9 311 aa15.35■□□□□ 0.05
RNF40-210ENST00000566811 KCNIP2Q9NS61 270 aa15.35■□□□□ 0.05
RNF40-210ENST00000566811 MLXQ9UH92 298 aa15.35■□□□□ 0.05
RNF40-210ENST00000566811 IGHV3OR16-8A0A075B7F1 116 aa15.34■□□□□ 0.05
RNF40-210ENST00000566811 CHEK1O14757 476 aa15.34■□□□□ 0.05
RNF40-210ENST00000566811 NHLH2Q02577 135 aa15.34■□□□□ 0.05
RNF40-210ENST00000566811 USF2Q15853 346 aaPredicted RBP15.34■□□□□ 0.05
RNF40-210ENST00000566811 CD300EQ496F6 205 aaPredicted RBP15.34■□□□□ 0.05
RNF40-210ENST00000566811 RBPMS2Q6ZRY4 209 aaKnown RBP15.34■□□□□ 0.05
RNF40-210ENST00000566811 INO80EQ8NBZ0 244 aaPredicted RBP15.34■□□□□ 0.05
RNF40-210ENST00000566811 ATP5SQ99766 215 aa15.34■□□□□ 0.05
RNF40-210ENST00000566811 DNAH3Q8TD57 4116 aa15.33■□□□□ 0.05
RNF40-210ENST00000566811 UBE2L5PA0A1B0GUS4 154 aa15.33■□□□□ 0.04
RNF40-210ENST00000566811 ZNF207O43670 478 aaKnown RBP15.33■□□□□ 0.04
RNF40-210ENST00000566811 PLP1P60201 277 aa15.33■□□□□ 0.04
RNF40-210ENST00000566811 LYZP61626 148 aa15.33■□□□□ 0.04
RNF40-210ENST00000566811 TSPAN4O14817 238 aa15.32■□□□□ 0.04
RNF40-210ENST00000566811 AGPAT2O15120 278 aa15.32■□□□□ 0.04
RNF40-210ENST00000566811 GP9P14770 177 aa15.32■□□□□ 0.04
RNF40-210ENST00000566811 CAMLGP49069 296 aa15.32■□□□□ 0.04
RNF40-210ENST00000566811 SPAG8Q99932 426 aaPredicted RBP15.32■□□□□ 0.04
RNF40-210ENST00000566811 PBDC1Q9BVG4 233 aa15.32■□□□□ 0.04
RNF40-210ENST00000566811 PARD6GQ9BYG4 376 aaPredicted RBP15.32■□□□□ 0.04
RNF40-210ENST00000566811 U3KQE9 123 aa15.32■□□□□ 0.04
RNF40-210ENST00000566811 HELTA6NFD8 242 aa15.31■□□□□ 0.04
RNF40-210ENST00000566811 LINC00869P0C866 280 aa15.31■□□□□ 0.04
RNF40-210ENST00000566811 EDN2P20800 178 aa15.31■□□□□ 0.04
RNF40-210ENST00000566811 KRTAP10-11P60412 298 aa15.31■□□□□ 0.04
RNF40-210ENST00000566811 OR2F1Q13607 317 aa15.31■□□□□ 0.04
RNF40-210ENST00000566811 C1orf194Q5T5A4 169 aa15.31■□□□□ 0.04
RNF40-210ENST00000566811 GTSCR1Q86UQ5 136 aa15.31■□□□□ 0.04
RNF40-210ENST00000566811 TMEM61Q8N0U2 210 aa15.31■□□□□ 0.04
RNF40-210ENST00000566811 MGST2Q99735 147 aa15.31■□□□□ 0.04
RNF40-210ENST00000566811 FBXL17Q9UF56 701 aa15.31■□□□□ 0.04
RNF40-210ENST00000566811 RPL29P47914 159 aaKnown RBP15.3■□□□□ 0.04
RNF40-210ENST00000566811 AP2S1P53680 142 aaPredicted RBP15.3■□□□□ 0.04
RNF40-210ENST00000566811 PAFAH1B2P68402 229 aa15.3■□□□□ 0.04
RNF40-210ENST00000566811 ZNF266Q14584 549 aa15.3■□□□□ 0.04
RNF40-210ENST00000566811 CLINT1Q14677 625 aa15.3■□□□□ 0.04
RNF40-210ENST00000566811 ST8SIA2Q92186 375 aa15.3■□□□□ 0.04
RNF40-210ENST00000566811 RNF2Q99496 336 aa15.3■□□□□ 0.04
RNF40-210ENST00000566811 AURKAIP1Q9NWT8 199 aaPredicted RBP15.3■□□□□ 0.04
RNF40-210ENST00000566811 TNFSF18Q9UNG2 199 aa15.3■□□□□ 0.04
RNF40-210ENST00000566811 ELOA3CA0A087WX78 387 aaPredicted RBP15.29■□□□□ 0.04
RNF40-210ENST00000566811 FXYD6-FXYD2A0A087WZ82 144 aa15.29■□□□□ 0.04
RNF40-210ENST00000566811 TRAV2A0A0B4J234 112 aa15.29■□□□□ 0.04
RNF40-210ENST00000566811 OR4C46A6NHA9 309 aa15.29■□□□□ 0.04
RNF40-210ENST00000566811 C17orf112F2Z3M2 114 aa15.29■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms