RNA–Protein interactions for RNA: ENST00000566808.2

CDH3-205, Transcript of cadherin 3, humanhuman

TSL 5

Gene CDH3, Length 573 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3-205ENST00000566808 KLK11Q9UBX7 282 aa11.62□□□□□ -0.55
CDH3-205ENST00000566808 ANAPC10Q9UM13 185 aa11.62□□□□□ -0.55
CDH3-205ENST00000566808 A8MTW9 85 aa11.61□□□□□ -0.55
CDH3-205ENST00000566808 ZNF705GA8MUZ8 300 aaPredicted RBP11.61□□□□□ -0.55
CDH3-205ENST00000566808 F6UB75 175 aa11.61□□□□□ -0.55
CDH3-205ENST00000566808 INSP01308 110 aa11.61□□□□□ -0.55
CDH3-205ENST00000566808 PMP2P02689 132 aa11.61□□□□□ -0.55
CDH3-205ENST00000566808 SLC25A4P12235 298 aa11.61□□□□□ -0.55
CDH3-205ENST00000566808 TMEM69Q5SWH9 247 aa11.61□□□□□ -0.55
CDH3-205ENST00000566808 SERTAD4-AS1Q5TG53 156 aa11.61□□□□□ -0.55
CDH3-205ENST00000566808 LPCAT3Q6P1A2 487 aa11.61□□□□□ -0.55
CDH3-205ENST00000566808 PRSS54Q6PEW0 395 aa11.61□□□□□ -0.55
CDH3-205ENST00000566808 OR5H6Q8NGV6 325 aa11.61□□□□□ -0.55
CDH3-205ENST00000566808 ZNF503Q96F45 646 aa11.61□□□□□ -0.55
CDH3-205ENST00000566808 DIABLOQ9NR28 239 aa11.61□□□□□ -0.55
CDH3-205ENST00000566808 MRPS16Q9Y3D3 137 aaKnown RBP11.61□□□□□ -0.55
CDH3-205ENST00000566808 A0A0B4J293 547 aa11.6□□□□□ -0.55
CDH3-205ENST00000566808 PLAC8L1A1L4L8 177 aa11.6□□□□□ -0.55
CDH3-205ENST00000566808 ISLRO14498 428 aa11.6□□□□□ -0.55
CDH3-205ENST00000566808 TOMM40O96008 361 aa11.6□□□□□ -0.55
CDH3-205ENST00000566808 IGKV1-5P01602 117 aa11.6□□□□□ -0.55
CDH3-205ENST00000566808 P0C879 139 aa11.6□□□□□ -0.55
CDH3-205ENST00000566808 AKR1C2P52895 323 aa11.6□□□□□ -0.55
CDH3-205ENST00000566808 TAS2R20P59543 309 aa11.6□□□□□ -0.55
CDH3-205ENST00000566808 B2MP61769 119 aa11.6□□□□□ -0.55
CDH3-205ENST00000566808 SAMD13Q5VXD3 122 aa11.6□□□□□ -0.55
CDH3-205ENST00000566808 SYT8Q8NBV8 401 aa11.6□□□□□ -0.55
CDH3-205ENST00000566808 GPR146Q96CH1 333 aa11.6□□□□□ -0.55
CDH3-205ENST00000566808 UHRF2Q96PU4 802 aa11.6□□□□□ -0.55
CDH3-205ENST00000566808 TXNL4BQ9NX01 149 aaKnown RBP11.6□□□□□ -0.55
CDH3-205ENST00000566808 DOK5Q9P104 306 aa11.6□□□□□ -0.55
CDH3-205ENST00000566808 PFDN2Q9UHV9 154 aa11.6□□□□□ -0.55
CDH3-205ENST00000566808 RD3LP0DJH9 198 aa11.59□□□□□ -0.55
CDH3-205ENST00000566808 ETV6P41212 452 aa11.59□□□□□ -0.55
CDH3-205ENST00000566808 AMTNQ6UX39 209 aa11.59□□□□□ -0.55
CDH3-205ENST00000566808 GNPNAT1Q96EK6 184 aaPredicted RBP11.59□□□□□ -0.55
CDH3-205ENST00000566808 EBAG9O00559 213 aa11.58□□□□□ -0.56
CDH3-205ENST00000566808 PRM2P04554 102 aa11.58□□□□□ -0.56
CDH3-205ENST00000566808 HTR2BP41595 481 aa11.58□□□□□ -0.56
CDH3-205ENST00000566808 FCN2Q15485 313 aa11.58□□□□□ -0.56
CDH3-205ENST00000566808 RNASE12Q5GAN4 147 aaKnown RBP11.58□□□□□ -0.56
CDH3-205ENST00000566808 OR8G2PQ6IF36 304 aa11.58□□□□□ -0.56
CDH3-205ENST00000566808 RXFP4Q8TDU9 374 aa11.58□□□□□ -0.56
CDH3-205ENST00000566808 RNF125Q96EQ8 232 aa11.58□□□□□ -0.56
CDH3-205ENST00000566808 RPRMQ9NS64 109 aa11.58□□□□□ -0.56
CDH3-205ENST00000566808 KRTAP29-1A8MX34 341 aaPredicted RBP11.57□□□□□ -0.56
CDH3-205ENST00000566808 NAT1P18440 290 aa11.57□□□□□ -0.56
CDH3-205ENST00000566808 M6PRP20645 277 aa11.57□□□□□ -0.56
CDH3-205ENST00000566808 OR51G1Q8NGK1 321 aa11.57□□□□□ -0.56
CDH3-205ENST00000566808 RNASEH2CQ8TDP1 164 aaKnown RBP11.57□□□□□ -0.56
CDH3-205ENST00000566808 TRAV26-1A0A087WT03 109 aa11.56□□□□□ -0.56
CDH3-205ENST00000566808 ATG12O94817 140 aa11.56□□□□□ -0.56
CDH3-205ENST00000566808 PSG1P11464 419 aa11.56□□□□□ -0.56
CDH3-205ENST00000566808 HRH1P35367 487 aa11.56□□□□□ -0.56
CDH3-205ENST00000566808 SUPT4H1P63272 117 aaKnown RBP11.56□□□□□ -0.56
CDH3-205ENST00000566808 ESRGQ1W209 222 aa11.56□□□□□ -0.56
CDH3-205ENST00000566808 C1orf194Q5T5A4 169 aa11.56□□□□□ -0.56
CDH3-205ENST00000566808 SLC24A4Q8NFF2 622 aa11.56□□□□□ -0.56
CDH3-205ENST00000566808 OR10J6PQ8NGY7 276 aa11.56□□□□□ -0.56
CDH3-205ENST00000566808 FCGR1BQ92637 280 aa11.56□□□□□ -0.56
CDH3-205ENST00000566808 M0R2Z0 102 aa11.55□□□□□ -0.56
CDH3-205ENST00000566808 CRXO43186 299 aaPredicted RBP11.55□□□□□ -0.56
CDH3-205ENST00000566808 SPINK13Q1W4C9 94 aa11.55□□□□□ -0.56
CDH3-205ENST00000566808 C2orf83Q53S99 150 aa11.55□□□□□ -0.56
CDH3-205ENST00000566808 ETFRF1Q6IPR1 90 aa11.55□□□□□ -0.56
CDH3-205ENST00000566808 C16orf74Q96GX8 76 aa11.55□□□□□ -0.56
CDH3-205ENST00000566808 PBDC1Q9BVG4 233 aa11.55□□□□□ -0.56
CDH3-205ENST00000566808 AZU1P20160 251 aa11.54□□□□□ -0.56
CDH3-205ENST00000566808 SDC2P34741 201 aa11.54□□□□□ -0.56
CDH3-205ENST00000566808 MEOX2P50222 304 aa11.54□□□□□ -0.56
CDH3-205ENST00000566808 UCP3P55916 312 aa11.54□□□□□ -0.56
CDH3-205ENST00000566808 TSPAN5P62079 268 aa11.54□□□□□ -0.56
CDH3-205ENST00000566808 OR5I1Q13606 314 aa11.54□□□□□ -0.56
CDH3-205ENST00000566808 IDNKQ5T6J7 187 aa11.54□□□□□ -0.56
CDH3-205ENST00000566808 OR11H7Q8NGC8 314 aa11.54□□□□□ -0.56
CDH3-205ENST00000566808 NPIPB3Q92617 1050 aa11.54□□□□□ -0.56
CDH3-205ENST00000566808 ACY3Q96HD9 319 aa11.54□□□□□ -0.56
CDH3-205ENST00000566808 TIMM8BQ9Y5J9 83 aaPredicted RBP11.54□□□□□ -0.56
CDH3-205ENST00000566808 H3BNG1 76 aa11.53□□□□□ -0.56
CDH3-205ENST00000566808 NXPH3O95157 252 aa11.53□□□□□ -0.56
CDH3-205ENST00000566808 DNAH10OSP0CZ25 163 aa11.53□□□□□ -0.56
CDH3-205ENST00000566808 SPCS3P61009 180 aa11.53□□□□□ -0.56
CDH3-205ENST00000566808 MXD1Q05195 221 aa11.53□□□□□ -0.56
CDH3-205ENST00000566808 GPR141Q7Z602 305 aa11.53□□□□□ -0.56
CDH3-205ENST00000566808 BAP18Q8IXM2 172 aa11.53□□□□□ -0.56
CDH3-205ENST00000566808 TMEM256Q8N2U0 113 aa11.53□□□□□ -0.56
CDH3-205ENST00000566808 C20orf173Q96LM9 149 aa11.53□□□□□ -0.56
CDH3-205ENST00000566808 HEYLQ9NQ87 328 aaPredicted RBP11.53□□□□□ -0.56
CDH3-205ENST00000566808 A0A087WTM6 91 aa11.52□□□□□ -0.57
CDH3-205ENST00000566808 ZNF701M0R085 212 aaPredicted RBP11.52□□□□□ -0.57
CDH3-205ENST00000566808 ELK1P19419 428 aa11.52□□□□□ -0.57
CDH3-205ENST00000566808 GCSHP23434 173 aa11.52□□□□□ -0.57
CDH3-205ENST00000566808 HLA-DMAP28067 261 aa11.52□□□□□ -0.57
CDH3-205ENST00000566808 CNN1P51911 297 aaKnown RBP11.52□□□□□ -0.57
CDH3-205ENST00000566808 RND3P61587 244 aa11.52□□□□□ -0.57
CDH3-205ENST00000566808 HAMPP81172 84 aa11.52□□□□□ -0.57
CDH3-205ENST00000566808 AARDQ4LEZ3 155 aa11.52□□□□□ -0.57
CDH3-205ENST00000566808 RRNAD1Q96FB5 475 aaKnown RBP11.52□□□□□ -0.57
CDH3-205ENST00000566808 C16orf92Q96LL3 132 aa11.52□□□□□ -0.57
CDH3-205ENST00000566808 TP53RKQ96S44 253 aa11.52□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms