RNA–Protein interactions for RNA: ENST00000566756.5

CMTM3-213, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

TSL 2

Gene CMTM3, Length 1,950 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-213ENST00000566756 LYPD2Q6UXB3 125 aa13.45□□□□□ -0.26
CMTM3-213ENST00000566756 ATP5L2Q7Z4Y8 100 aa13.45□□□□□ -0.26
CMTM3-213ENST00000566756 CTSZQ9UBR2 303 aa13.45□□□□□ -0.26
CMTM3-213ENST00000566756 A0A1W2PS18 150 aa13.44□□□□□ -0.26
CMTM3-213ENST00000566756 TCAPO15273 167 aa13.44□□□□□ -0.26
CMTM3-213ENST00000566756 IGHV1-8P0DP01 117 aa13.44□□□□□ -0.26
CMTM3-213ENST00000566756 HIST1H1EP10412 219 aaKnown RBP13.44□□□□□ -0.26
CMTM3-213ENST00000566756 GNLYP22749 145 aa13.44□□□□□ -0.26
CMTM3-213ENST00000566756 CDKN1AP38936 164 aa13.44□□□□□ -0.26
CMTM3-213ENST00000566756 TCL1AP56279 114 aa13.44□□□□□ -0.26
CMTM3-213ENST00000566756 DIAPH2-AS1Q14236 149 aa13.44□□□□□ -0.26
CMTM3-213ENST00000566756 C10orf55Q5SWW7 151 aa13.44□□□□□ -0.26
CMTM3-213ENST00000566756 MUC15Q8N387 334 aa13.44□□□□□ -0.26
CMTM3-213ENST00000566756 CCL17Q92583 94 aa13.44□□□□□ -0.26
CMTM3-213ENST00000566756 FBXL7Q9UJT9 491 aa13.44□□□□□ -0.26
CMTM3-213ENST00000566756 TBL2Q9Y4P3 447 aaKnown RBP13.44□□□□□ -0.26
CMTM3-213ENST00000566756 SPTBN1Q01082 2364 aaKnown RBP13.44□□□□□ -0.26
CMTM3-213ENST00000566756 IGLC7A0M8Q6 106 aa13.43□□□□□ -0.26
CMTM3-213ENST00000566756 SLC25A17O43808 307 aa13.43□□□□□ -0.26
CMTM3-213ENST00000566756 ZNF324O75467 553 aaPredicted RBP13.43□□□□□ -0.26
CMTM3-213ENST00000566756 SRIP30626 198 aa13.43□□□□□ -0.26
CMTM3-213ENST00000566756 PLP1P60201 277 aa13.43□□□□□ -0.26
CMTM3-213ENST00000566756 MRPL54Q6P161 138 aaKnown RBP13.43□□□□□ -0.26
CMTM3-213ENST00000566756 C19orf35Q6ZS72 473 aa13.43□□□□□ -0.26
CMTM3-213ENST00000566756 LINC00305Q7Z4B0 112 aa13.43□□□□□ -0.26
CMTM3-213ENST00000566756 TMEM116Q8NCL8 245 aa13.43□□□□□ -0.26
CMTM3-213ENST00000566756 VN1R17PQ8TDU5 208 aa13.43□□□□□ -0.26
CMTM3-213ENST00000566756 ITLN2Q8WWU7 325 aaPredicted RBP13.43□□□□□ -0.26
CMTM3-213ENST00000566756 C7orf69Q9H7B7 122 aa13.43□□□□□ -0.26
CMTM3-213ENST00000566756 NRN1Q9NPD7 142 aa13.43□□□□□ -0.26
CMTM3-213ENST00000566756 TNFRSF19Q9NS68 423 aa13.43□□□□□ -0.26
CMTM3-213ENST00000566756 ABCA4P78363 2273 aa13.43□□□□□ -0.26
CMTM3-213ENST00000566756 SPINK4O60575 86 aa13.43□□□□□ -0.26
CMTM3-213ENST00000566756 AMTP48728 403 aa13.43□□□□□ -0.26
CMTM3-213ENST00000566756 Q8N976 141 aa13.43□□□□□ -0.26
CMTM3-213ENST00000566756 NUDT10Q8NFP7 164 aa13.43□□□□□ -0.26
CMTM3-213ENST00000566756 TSKUQ8WUA8 353 aa13.43□□□□□ -0.26
CMTM3-213ENST00000566756 NUDT11Q96G61 164 aa13.43□□□□□ -0.26
CMTM3-213ENST00000566756 TMEM133Q9H2Q1 129 aa13.43□□□□□ -0.26
CMTM3-213ENST00000566756 EPDR1Q9UM22 224 aa13.43□□□□□ -0.26
CMTM3-213ENST00000566756 OR2J3O76001 311 aa13.42□□□□□ -0.26
CMTM3-213ENST00000566756 CRYGBP07316 175 aa13.42□□□□□ -0.26
CMTM3-213ENST00000566756 CD33P20138 364 aa13.42□□□□□ -0.26
CMTM3-213ENST00000566756 UQCRFS1P47985 274 aa13.42□□□□□ -0.26
CMTM3-213ENST00000566756 KLF5Q13887 457 aaPredicted RBP13.42□□□□□ -0.26
CMTM3-213ENST00000566756 RBM14Q96PK6 669 aaKnown RBP13.42□□□□□ -0.26
CMTM3-213ENST00000566756 MRPL36Q9P0J6 103 aaKnown RBP13.42□□□□□ -0.26
CMTM3-213ENST00000566756 SLC35B1P78383 322 aa13.41□□□□□ -0.26
CMTM3-213ENST00000566756 CT83Q5H943 113 aa13.41□□□□□ -0.26
CMTM3-213ENST00000566756 C11orf42Q8N5U0 333 aa13.41□□□□□ -0.26
CMTM3-213ENST00000566756 NUP35Q8NFH5 326 aa13.41□□□□□ -0.26
CMTM3-213ENST00000566756 LINC00479Q96M42 142 aa13.41□□□□□ -0.26
CMTM3-213ENST00000566756 C22orf46C9J442 243 aa13.41□□□□□ -0.26
CMTM3-213ENST00000566756 DIRC3C9JPN6 131 aa13.41□□□□□ -0.26
CMTM3-213ENST00000566756 RPL27AP46776 148 aaKnown RBP13.41□□□□□ -0.26
CMTM3-213ENST00000566756 PRRX1P54821 245 aa13.41□□□□□ -0.26
CMTM3-213ENST00000566756 UBE2G1P62253 170 aa13.41□□□□□ -0.26
CMTM3-213ENST00000566756 KIAA1644Q3SXP7 199 aa13.41□□□□□ -0.26
CMTM3-213ENST00000566756 ZNF705AQ6ZN79 300 aaPredicted RBP13.41□□□□□ -0.26
CMTM3-213ENST00000566756 FAM168AQ92567 244 aa13.41□□□□□ -0.26
CMTM3-213ENST00000566756 RCHY1Q96PM5 261 aa13.41□□□□□ -0.26
CMTM3-213ENST00000566756 IGHV1-69-2A0A0G2JMI3 117 aa13.4□□□□□ -0.26
CMTM3-213ENST00000566756 TDRG1Q3Y452 100 aa13.4□□□□□ -0.26
CMTM3-213ENST00000566756 C18orf32Q8TCD1 76 aa13.4□□□□□ -0.26
CMTM3-213ENST00000566756 TMEM68Q96MH6 324 aa13.4□□□□□ -0.26
CMTM3-213ENST00000566756 GPR82Q96P67 336 aa13.4□□□□□ -0.26
CMTM3-213ENST00000566756 MLST8Q9BVC4 326 aa13.4□□□□□ -0.26
CMTM3-213ENST00000566756 SOX21Q9Y651 276 aaPredicted RBP13.4□□□□□ -0.26
CMTM3-213ENST00000566756 RBP4P02753 201 aa13.4□□□□□ -0.27
CMTM3-213ENST00000566756 CTRLP40313 264 aa13.4□□□□□ -0.27
CMTM3-213ENST00000566756 KRTDAPP60985 99 aa13.4□□□□□ -0.27
CMTM3-213ENST00000566756 SLAQ13239 276 aa13.4□□□□□ -0.27
CMTM3-213ENST00000566756 C5orf17Q8NAS9 161 aa13.4□□□□□ -0.27
CMTM3-213ENST00000566756 NHLRC2Q8NBF2 726 aa13.4□□□□□ -0.27
CMTM3-213ENST00000566756 FMC1Q96HJ9 113 aa13.4□□□□□ -0.27
CMTM3-213ENST00000566756 ATG101Q9BSB4 218 aa13.4□□□□□ -0.27
CMTM3-213ENST00000566756 TPSG1Q9NRR2 321 aa13.4□□□□□ -0.27
CMTM3-213ENST00000566756 ZNF492Q9P255 531 aa13.4□□□□□ -0.27
CMTM3-213ENST00000566756 PAM16Q9Y3D7 125 aa13.4□□□□□ -0.27
CMTM3-213ENST00000566756 HYPMO75409 117 aa13.39□□□□□ -0.27
CMTM3-213ENST00000566756 TOMM40O96008 361 aa13.39□□□□□ -0.27
CMTM3-213ENST00000566756 CA1P00915 261 aaPredicted RBP13.39□□□□□ -0.27
CMTM3-213ENST00000566756 IGLV1-47P01700 117 aa13.39□□□□□ -0.27
CMTM3-213ENST00000566756 SLC25A5P05141 298 aaKnown RBP13.39□□□□□ -0.27
CMTM3-213ENST00000566756 NBEAP1P0C6P0 100 aa13.39□□□□□ -0.27
CMTM3-213ENST00000566756 MFAP2P55001 183 aa13.39□□□□□ -0.27
CMTM3-213ENST00000566756 FAM162BQ5T6X4 162 aa13.39□□□□□ -0.27
CMTM3-213ENST00000566756 NIT1Q86X76 327 aa13.39□□□□□ -0.27
CMTM3-213ENST00000566756 C8orf46Q8TAG6 207 aa13.39□□□□□ -0.27
CMTM3-213ENST00000566756 KALRNO60229 2985 aa13.39□□□□□ -0.27
CMTM3-213ENST00000566756 A0A1B0GXF2 115 aa13.38□□□□□ -0.27
CMTM3-213ENST00000566756 RITA1Q96K30 269 aa13.38□□□□□ -0.27
CMTM3-213ENST00000566756 RNF5Q99942 180 aa13.38□□□□□ -0.27
CMTM3-213ENST00000566756 SRSF8Q9BRL6 282 aaKnown RBP13.38□□□□□ -0.27
CMTM3-213ENST00000566756 FAM103A1Q9BTL3 118 aaKnown RBP13.38□□□□□ -0.27
CMTM3-213ENST00000566756 SSBP3Q9BWW4 388 aaPredicted RBP13.38□□□□□ -0.27
CMTM3-213ENST00000566756 SIGLEC9Q9Y336 463 aa13.38□□□□□ -0.27
CMTM3-213ENST00000566756 RNF114Q9Y508 228 aa13.38□□□□□ -0.27
CMTM3-213ENST00000566756 RELNP78509 3460 aa13.38□□□□□ -0.27
CMTM3-213ENST00000566756 IGSF10Q6WRI0 2623 aa13.38□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms