RNA–Protein interactions for RNA: ENST00000566549.5

MSLN-207, Transcript of mesothelin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene MSLN, Length 2,418 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSLN-207ENST00000566549 TMEM256Q8N2U0 113 aa14.87□□□□□ -0.03
MSLN-207ENST00000566549 CFHR4Q92496 578 aa14.87□□□□□ -0.03
MSLN-207ENST00000566549 S4R3C0 116 aa14.87□□□□□ -0.03
MSLN-207ENST00000566549 AKAP6Q13023 2319 aa14.87□□□□□ -0.03
MSLN-207ENST00000566549 GCGP01275 180 aa14.87□□□□□ -0.03
MSLN-207ENST00000566549 ZFP36P26651 326 aaKnown RBP14.87□□□□□ -0.03
MSLN-207ENST00000566549 GPR6P46095 362 aaPredicted RBP14.87□□□□□ -0.03
MSLN-207ENST00000566549 PDLIM4P50479 330 aa14.87□□□□□ -0.03
MSLN-207ENST00000566549 ISLRO14498 428 aa14.86□□□□□ -0.03
MSLN-207ENST00000566549 PSG1P11464 419 aa14.86□□□□□ -0.03
MSLN-207ENST00000566549 HIST1H1BP16401 226 aaKnown RBP14.86□□□□□ -0.03
MSLN-207ENST00000566549 VMO1Q7Z5L0 202 aa14.86□□□□□ -0.03
MSLN-207ENST00000566549 MRPL18Q9H0U6 180 aaKnown RBP14.86□□□□□ -0.03
MSLN-207ENST00000566549 IGLC1P0CG04 106 aa14.86□□□□□ -0.03
MSLN-207ENST00000566549 YPEL3P61236 119 aaPredicted RBP14.86□□□□□ -0.03
MSLN-207ENST00000566549 C9orf152Q5JTZ5 239 aa14.86□□□□□ -0.03
MSLN-207ENST00000566549 PRR27Q6MZM9 219 aa14.86□□□□□ -0.03
MSLN-207ENST00000566549 CDC42EP3Q9UKI2 254 aa14.86□□□□□ -0.03
MSLN-207ENST00000566549 TRAV20A0A0B4J274 112 aa14.85□□□□□ -0.03
MSLN-207ENST00000566549 SNURFLB1AK76 121 aa14.85□□□□□ -0.03
MSLN-207ENST00000566549 I3L2K1 104 aa14.85□□□□□ -0.03
MSLN-207ENST00000566549 SLC25A5P05141 298 aaKnown RBP14.85□□□□□ -0.03
MSLN-207ENST00000566549 PRTN3P24158 256 aa14.85□□□□□ -0.03
MSLN-207ENST00000566549 CEACAM3P40198 252 aa14.85□□□□□ -0.03
MSLN-207ENST00000566549 DTX2Q86UW9 622 aa14.85□□□□□ -0.03
MSLN-207ENST00000566549 DYNAPQ8N1N2 210 aa14.85□□□□□ -0.03
MSLN-207ENST00000566549 RNF5Q99942 180 aa14.85□□□□□ -0.03
MSLN-207ENST00000566549 PGPA6NDG6 321 aa14.85□□□□□ -0.03
MSLN-207ENST00000566549 ZNF705GA8MUZ8 300 aaPredicted RBP14.85□□□□□ -0.03
MSLN-207ENST00000566549 ODF3BA8MYP8 253 aa14.85□□□□□ -0.03
MSLN-207ENST00000566549 M0R1W7 72 aa14.85□□□□□ -0.03
MSLN-207ENST00000566549 NUPR1O60356 82 aa14.85□□□□□ -0.03
MSLN-207ENST00000566549 BAGE2Q86Y30 109 aa14.85□□□□□ -0.03
MSLN-207ENST00000566549 FAM168AQ92567 244 aa14.85□□□□□ -0.03
MSLN-207ENST00000566549 RASL11BQ9BPW5 248 aa14.85□□□□□ -0.03
MSLN-207ENST00000566549 PRDM13Q9H4Q3 707 aa14.85□□□□□ -0.03
MSLN-207ENST00000566549 OSTCQ9NRP0 149 aa14.85□□□□□ -0.03
MSLN-207ENST00000566549 NBEAP1P0C6P0 100 aa14.84□□□□□ -0.03
MSLN-207ENST00000566549 VPS13CQ709C8 3753 aa14.84□□□□□ -0.03
MSLN-207ENST00000566549 MRPL54Q6P161 138 aaKnown RBP14.84□□□□□ -0.03
MSLN-207ENST00000566549 NCBP2LA6PVI3 153 aaKnown RBP14.83□□□□□ -0.04
MSLN-207ENST00000566549 TOX4O94842 621 aa14.83□□□□□ -0.04
MSLN-207ENST00000566549 TAS2R60P59551 318 aa14.83□□□□□ -0.04
MSLN-207ENST00000566549 STXBP6Q8NFX7 210 aa14.83□□□□□ -0.04
MSLN-207ENST00000566549 HIGD1AQ9Y241 93 aa14.83□□□□□ -0.04
MSLN-207ENST00000566549 PRB4P10163 310 aaPredicted RBP14.83□□□□□ -0.04
MSLN-207ENST00000566549 GP9P14770 177 aa14.83□□□□□ -0.04
MSLN-207ENST00000566549 GBGT1Q8N5D6 347 aa14.83□□□□□ -0.04
MSLN-207ENST00000566549 TMEM18Q96B42 140 aa14.83□□□□□ -0.04
MSLN-207ENST00000566549 EPDR1Q9UM22 224 aa14.83□□□□□ -0.04
MSLN-207ENST00000566549 C19orf84I3L1E1 186 aa14.82□□□□□ -0.04
MSLN-207ENST00000566549 K7EIM0 57 aa14.82□□□□□ -0.04
MSLN-207ENST00000566549 GZMBP10144 247 aa14.82□□□□□ -0.04
MSLN-207ENST00000566549 MYCNOSP40205 109 aa14.82□□□□□ -0.04
MSLN-207ENST00000566549 RAB4BP61018 213 aa14.82□□□□□ -0.04
MSLN-207ENST00000566549 UBE2G1P62253 170 aa14.82□□□□□ -0.04
MSLN-207ENST00000566549 TRAV9-1A0A075B6T8 112 aa14.82□□□□□ -0.04
MSLN-207ENST00000566549 IGKV1-17P01599 117 aa14.82□□□□□ -0.04
MSLN-207ENST00000566549 GNLYP22749 145 aa14.82□□□□□ -0.04
MSLN-207ENST00000566549 PRO1933Q9H354 126 aa14.82□□□□□ -0.04
MSLN-207ENST00000566549 WNK2Q9Y3S1 2297 aa14.82□□□□□ -0.04
MSLN-207ENST00000566549 COL12A1Q99715 3063 aa14.81□□□□□ -0.04
MSLN-207ENST00000566549 CX3CL1P78423 397 aa14.81□□□□□ -0.04
MSLN-207ENST00000566549 JOSD1Q15040 202 aaPredicted RBP14.81□□□□□ -0.04
MSLN-207ENST00000566549 C5orf64Q2M2E5 130 aa14.81□□□□□ -0.04
MSLN-207ENST00000566549 UNQ6494/PRO21346Q6UXR6 183 aa14.81□□□□□ -0.04
MSLN-207ENST00000566549 ZNF600Q6ZNG1 722 aa14.81□□□□□ -0.04
MSLN-207ENST00000566549 RBM14Q96PK6 669 aaKnown RBP14.81□□□□□ -0.04
MSLN-207ENST00000566549 PRORYQ9H606 182 aa14.81□□□□□ -0.04
MSLN-207ENST00000566549 SPTAN1Q13813 2472 aaKnown RBP14.81□□□□□ -0.04
MSLN-207ENST00000566549 HOXB4P17483 251 aaPredicted RBP14.81□□□□□ -0.04
MSLN-207ENST00000566549 KIAA1644Q3SXP7 199 aa14.81□□□□□ -0.04
MSLN-207ENST00000566549 NAT8BQ9UHF3 227 aa14.81□□□□□ -0.04
MSLN-207ENST00000566549 F2Z2F3 143 aa14.8□□□□□ -0.04
MSLN-207ENST00000566549 NDUFA3O95167 84 aa14.8□□□□□ -0.04
MSLN-207ENST00000566549 NPBQ8NG41 125 aa14.8□□□□□ -0.04
MSLN-207ENST00000566549 ITLN2Q8WWU7 325 aaPredicted RBP14.8□□□□□ -0.04
MSLN-207ENST00000566549 SLC25A39Q9BZJ4 359 aaPredicted RBP14.8□□□□□ -0.04
MSLN-207ENST00000566549 Q9H3A6 140 aa14.8□□□□□ -0.04
MSLN-207ENST00000566549 CRISP2P16562 243 aa14.8□□□□□ -0.04
MSLN-207ENST00000566549 NDPQ00604 133 aa14.8□□□□□ -0.04
MSLN-207ENST00000566549 KIR3DL3Q8N743 410 aa14.8□□□□□ -0.04
MSLN-207ENST00000566549 TP53TG3Q9ULZ0 132 aa14.8□□□□□ -0.04
MSLN-207ENST00000566549 PKD1L2Q7Z442 2459 aa14.79□□□□□ -0.04
MSLN-207ENST00000566549 PLP1P60201 277 aa14.79□□□□□ -0.04
MSLN-207ENST00000566549 PAX2Q02962 417 aa14.79□□□□□ -0.04
MSLN-207ENST00000566549 ZFHX3Q15911 3703 aa14.79□□□□□ -0.04
MSLN-207ENST00000566549 NUDT10Q8NFP7 164 aa14.78□□□□□ -0.04
MSLN-207ENST00000566549 NUDT11Q96G61 164 aa14.78□□□□□ -0.04
MSLN-207ENST00000566549 SMIM27A0A1W2PRY6 76 aa14.78□□□□□ -0.04
MSLN-207ENST00000566549 GATCO43716 136 aaKnown RBP14.78□□□□□ -0.04
MSLN-207ENST00000566549 TMEM183BQ1AE95 376 aa14.78□□□□□ -0.04
MSLN-207ENST00000566549 EXOC3-AS1Q8N2X6 119 aa14.78□□□□□ -0.04
MSLN-207ENST00000566549 CMTM2Q8TAZ6 248 aa14.77□□□□□ -0.04
MSLN-207ENST00000566549 LPAR2Q9HBW0 351 aa14.77□□□□□ -0.04
MSLN-207ENST00000566549 ZNF586Q9NXT0 402 aa14.77□□□□□ -0.04
MSLN-207ENST00000566549 IGHV3-23P01764 117 aa14.77□□□□□ -0.05
MSLN-207ENST00000566549 IL4P05112 153 aa14.77□□□□□ -0.05
MSLN-207ENST00000566549 TMEM136Q6ZRR5 245 aa14.77□□□□□ -0.05
MSLN-207ENST00000566549 OR5R1Q8NH85 324 aa14.77□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 89.2 ms