RNA–Protein interactions for RNA: ENST00000566409.1

FANCA-220, Transcript of FA complementation group A, humanhuman

TSL 1 (best)

Gene FANCA, Length 395 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FANCA-220ENST00000566409 TMED3Q9Y3Q3 217 aa10.7□□□□□ -0.7
FANCA-220ENST00000566409 CXorf65A6NEN9 183 aa10.69□□□□□ -0.7
FANCA-220ENST00000566409 HELTA6NFD8 242 aa10.69□□□□□ -0.7
FANCA-220ENST00000566409 FAM90A26D6RGX4 464 aa10.69□□□□□ -0.7
FANCA-220ENST00000566409 HOXB5P09067 269 aa10.69□□□□□ -0.7
FANCA-220ENST00000566409 DHRS2Q13268 280 aa10.69□□□□□ -0.7
FANCA-220ENST00000566409 GGNBP1Q5YKI7 109 aa10.69□□□□□ -0.7
FANCA-220ENST00000566409 OR11H2Q8NH07 326 aa10.69□□□□□ -0.7
FANCA-220ENST00000566409 FLVCR2Q9UPI3 526 aa10.69□□□□□ -0.7
FANCA-220ENST00000566409 IGKV1OR2-108A0A075B7D4 117 aa10.68□□□□□ -0.7
FANCA-220ENST00000566409 PIGBOS1A0A0B4J2F0 54 aa10.68□□□□□ -0.7
FANCA-220ENST00000566409 PRSS46E5RG02 174 aa10.68□□□□□ -0.7
FANCA-220ENST00000566409 JTBO76095 146 aa10.68□□□□□ -0.7
FANCA-220ENST00000566409 NDUFB6O95139 128 aa10.68□□□□□ -0.7
FANCA-220ENST00000566409 BTCP35070 178 aa10.68□□□□□ -0.7
FANCA-220ENST00000566409 STHQ8IWL8 128 aa10.68□□□□□ -0.7
FANCA-220ENST00000566409 RNF125Q96EQ8 232 aa10.68□□□□□ -0.7
FANCA-220ENST00000566409 LINC00854A0A1B0GVQ3 168 aa10.67□□□□□ -0.7
FANCA-220ENST00000566409 C9orf170A2RU37 121 aa10.67□□□□□ -0.7
FANCA-220ENST00000566409 ZFP92A6NM28 416 aa10.67□□□□□ -0.7
FANCA-220ENST00000566409 SYNGR2O43760 224 aa10.67□□□□□ -0.7
FANCA-220ENST00000566409 ADAP1O75689 374 aa10.67□□□□□ -0.7
FANCA-220ENST00000566409 C4BPBP20851 252 aa10.67□□□□□ -0.7
FANCA-220ENST00000566409 AP2S1P53680 142 aaPredicted RBP10.67□□□□□ -0.7
FANCA-220ENST00000566409 UBE2MP61081 183 aaKnown RBP10.67□□□□□ -0.7
FANCA-220ENST00000566409 PSMG4Q5JS54 123 aa10.67□□□□□ -0.7
FANCA-220ENST00000566409 ACTL10Q5JWF8 245 aa10.67□□□□□ -0.7
FANCA-220ENST00000566409 CEMP1Q6PRD7 247 aaPredicted RBP10.67□□□□□ -0.7
FANCA-220ENST00000566409 SIGLEC15Q6ZMC9 328 aa10.67□□□□□ -0.7
FANCA-220ENST00000566409 SLC35E1Q96K37 410 aa10.67□□□□□ -0.7
FANCA-220ENST00000566409 RAB40CQ96S21 281 aa10.67□□□□□ -0.7
FANCA-220ENST00000566409 NAP1L6A6NFF2 107 aa10.66□□□□□ -0.7
FANCA-220ENST00000566409 WRBO00258 174 aa10.66□□□□□ -0.7
FANCA-220ENST00000566409 DEFB4AO15263 64 aa10.66□□□□□ -0.7
FANCA-220ENST00000566409 EIF2B2P49770 351 aaKnown RBP10.66□□□□□ -0.7
FANCA-220ENST00000566409 TRIQKQ629K1 86 aa10.66□□□□□ -0.7
FANCA-220ENST00000566409 GSG1LQ6UXU4 331 aa10.66□□□□□ -0.7
FANCA-220ENST00000566409 THAP8Q8NA92 274 aa10.66□□□□□ -0.7
FANCA-220ENST00000566409 TRGV9Q99603 122 aa10.66□□□□□ -0.7
FANCA-220ENST00000566409 PBDC1Q9BVG4 233 aa10.66□□□□□ -0.7
FANCA-220ENST00000566409 C11orf68Q9H3H3 251 aaKnown RBP10.66□□□□□ -0.7
FANCA-220ENST00000566409 NRN1Q9NPD7 142 aa10.66□□□□□ -0.7
FANCA-220ENST00000566409 NUPR2A6NF83 97 aa10.65□□□□□ -0.7
FANCA-220ENST00000566409 MED6O75586 246 aa10.65□□□□□ -0.7
FANCA-220ENST00000566409 OR4E1P0C645 316 aa10.65□□□□□ -0.7
FANCA-220ENST00000566409 NANOS2P60321 138 aaKnown RBP10.65□□□□□ -0.7
FANCA-220ENST00000566409 RAB11AP62491 216 aa10.65□□□□□ -0.7
FANCA-220ENST00000566409 ID3Q02535 119 aa10.65□□□□□ -0.7
FANCA-220ENST00000566409 OR2F1Q13607 317 aa10.65□□□□□ -0.7
FANCA-220ENST00000566409 TMEM217Q8N7C4 229 aa10.65□□□□□ -0.7
FANCA-220ENST00000566409 CSNK1G2-AS1Q8NCQ2 148 aa10.65□□□□□ -0.7
FANCA-220ENST00000566409 LINC00476Q8WZB0 136 aa10.65□□□□□ -0.7
FANCA-220ENST00000566409 PAIP2BQ9ULR5 123 aaKnown RBP10.65□□□□□ -0.7
FANCA-220ENST00000566409 FRAS1Q86XX4 4008 aa10.65□□□□□ -0.71
FANCA-220ENST00000566409 VPS13DQ5THJ4 4388 aa10.64□□□□□ -0.71
FANCA-220ENST00000566409 SNRPGP15A8MWD9 76 aa10.64□□□□□ -0.71
FANCA-220ENST00000566409 H3BP45 60 aa10.64□□□□□ -0.71
FANCA-220ENST00000566409 IL7P13232 177 aa10.64□□□□□ -0.71
FANCA-220ENST00000566409 ANXA7P20073 488 aaKnown RBP10.64□□□□□ -0.71
FANCA-220ENST00000566409 INPP1P49441 399 aa10.64□□□□□ -0.71
FANCA-220ENST00000566409 DEFB1P60022 68 aa10.64□□□□□ -0.71
FANCA-220ENST00000566409 LYZP61626 148 aa10.64□□□□□ -0.71
FANCA-220ENST00000566409 SPANXN5Q5MJ07 72 aa10.64□□□□□ -0.71
FANCA-220ENST00000566409 OR8G2PQ6IF36 304 aa10.64□□□□□ -0.71
FANCA-220ENST00000566409 TMEM182Q6ZP80 229 aaPredicted RBP10.64□□□□□ -0.71
FANCA-220ENST00000566409 Q8NAQ8 132 aa10.64□□□□□ -0.71
FANCA-220ENST00000566409 PHLDA1Q8WV24 401 aaPredicted RBP10.64□□□□□ -0.71
FANCA-220ENST00000566409 CIB3Q96Q77 187 aaPredicted RBP10.64□□□□□ -0.71
FANCA-220ENST00000566409 WDR12Q9GZL7 423 aaKnown RBP10.64□□□□□ -0.71
FANCA-220ENST00000566409 SEPSECSQ9HD40 501 aaKnown RBP10.64□□□□□ -0.71
FANCA-220ENST00000566409 PLA2G10O15496 165 aa10.63□□□□□ -0.71
FANCA-220ENST00000566409 RBMY1A1P0DJD3 496 aaKnown RBP10.63□□□□□ -0.71
FANCA-220ENST00000566409 RBMY1CP0DJD4 496 aa10.63□□□□□ -0.71
FANCA-220ENST00000566409 SPP1P10451 314 aa10.63□□□□□ -0.71
FANCA-220ENST00000566409 POLR2GP62487 172 aaKnown RBP eCLIP10.63□□□□□ -0.71
FANCA-220ENST00000566409 RBMY1FQ15415 496 aaKnown RBP10.63□□□□□ -0.71
FANCA-220ENST00000566409 MORN3Q6PF18 240 aaPredicted RBP10.63□□□□□ -0.71
FANCA-220ENST00000566409 OR4D5Q8NGN0 318 aa10.63□□□□□ -0.71
FANCA-220ENST00000566409 C17orf77Q96MU5 243 aa10.63□□□□□ -0.71
FANCA-220ENST00000566409 CLEC5AQ9NY25 188 aa10.63□□□□□ -0.71
FANCA-220ENST00000566409 X6R8D5 127 aa10.63□□□□□ -0.71
FANCA-220ENST00000566409 PMS2P5A8MQ11 134 aa10.62□□□□□ -0.71
FANCA-220ENST00000566409 ZNF705EA8MWA4 302 aaPredicted RBP10.62□□□□□ -0.71
FANCA-220ENST00000566409 H3BMM0 161 aa10.62□□□□□ -0.71
FANCA-220ENST00000566409 SOCS3O14543 225 aa10.62□□□□□ -0.71
FANCA-220ENST00000566409 GATA2P23769 480 aaPredicted RBP10.62□□□□□ -0.71
FANCA-220ENST00000566409 PAX9P55771 341 aa10.62□□□□□ -0.71
FANCA-220ENST00000566409 SNRPD3P62318 126 aaKnown RBP10.62□□□□□ -0.71
FANCA-220ENST00000566409 GDF5OSQ5U4N7 250 aa10.62□□□□□ -0.71
FANCA-220ENST00000566409 C11orf45Q8TAV5 145 aa10.62□□□□□ -0.71
FANCA-220ENST00000566409 IGHV4-28A0A0C4DH34 117 aa10.61□□□□□ -0.71
FANCA-220ENST00000566409 RPP30P78346 268 aaKnown RBP10.61□□□□□ -0.71
FANCA-220ENST00000566409 TMEM41BQ5BJD5 291 aa10.61□□□□□ -0.71
FANCA-220ENST00000566409 C1orf194Q5T5A4 169 aa10.61□□□□□ -0.71
FANCA-220ENST00000566409 COQ8AQ8NI60 647 aa10.61□□□□□ -0.71
FANCA-220ENST00000566409 C7orf50Q9BRJ6 194 aaKnown RBP10.61□□□□□ -0.71
FANCA-220ENST00000566409 STRAPQ9Y3F4 350 aaKnown RBP10.61□□□□□ -0.71
FANCA-220ENST00000566409 ELOA3CA0A087WX78 387 aaPredicted RBP10.6□□□□□ -0.71
FANCA-220ENST00000566409 CENPXA8MT69 81 aa10.6□□□□□ -0.71
FANCA-220ENST00000566409 CCNKO75909 580 aa10.6□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms