RNA–Protein interactions for RNA: ENST00000566029.5

CHD9-218, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHD9, Length 13,110 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-218ENST00000566029 PCOLCEQ15113 449 aa2.42□□□□□ -2.02
CHD9-218ENST00000566029 KIAA1644Q3SXP7 199 aa2.42□□□□□ -2.02
CHD9-218ENST00000566029 PF4P02776 101 aa2.42□□□□□ -2.02
CHD9-218ENST00000566029 RUNX3Q13761 415 aa2.42□□□□□ -2.02
CHD9-218ENST00000566029 ZNF56Q15929 161 aa2.42□□□□□ -2.02
CHD9-218ENST00000566029 FOXL2NBQ6ZUU3 175 aa2.42□□□□□ -2.02
CHD9-218ENST00000566029 ZNF436-AS1Q8NC38 126 aaPredicted RBP2.42□□□□□ -2.02
CHD9-218ENST00000566029 CACNG8Q8WXS5 425 aa2.42□□□□□ -2.02
CHD9-218ENST00000566029 POM121L2Q96KW2 1035 aa2.42□□□□□ -2.02
CHD9-218ENST00000566029 ST20Q9HBF5 79 aa2.42□□□□□ -2.02
CHD9-218ENST00000566029 MS4A18H0YCH9 400 aa2.42□□□□□ -2.02
CHD9-218ENST00000566029 H3BRM9 83 aa2.42□□□□□ -2.02
CHD9-218ENST00000566029 MGPP08493 103 aa2.42□□□□□ -2.02
CHD9-218ENST00000566029 P0C879 139 aa2.42□□□□□ -2.02
CHD9-218ENST00000566029 UBE2G1P62253 170 aa2.42□□□□□ -2.02
CHD9-218ENST00000566029 C3AR1Q16581 482 aa2.42□□□□□ -2.02
CHD9-218ENST00000566029 PAXXQ9BUH6 204 aa2.42□□□□□ -2.02
CHD9-218ENST00000566029 GNB1LQ9BYB4 327 aa2.42□□□□□ -2.02
CHD9-218ENST00000566029 WDR83OSQ9Y284 106 aa2.42□□□□□ -2.02
CHD9-218ENST00000566029 PLXNA2O75051 1894 aa2.42□□□□□ -2.02
CHD9-218ENST00000566029 PPYP01298 95 aa2.42□□□□□ -2.02
CHD9-218ENST00000566029 IGHV4-34P06331 123 aa2.42□□□□□ -2.02
CHD9-218ENST00000566029 GNG5P63218 68 aa2.42□□□□□ -2.02
CHD9-218ENST00000566029 DEFB134Q4QY38 66 aa2.42□□□□□ -2.02
CHD9-218ENST00000566029 DIDO1Q9BTC0 2240 aaKnown RBP2.42□□□□□ -2.02
CHD9-218ENST00000566029 K7EN84 100 aa2.42□□□□□ -2.02
CHD9-218ENST00000566029 MGST3O14880 152 aa2.42□□□□□ -2.02
CHD9-218ENST00000566029 CRYGBP07316 175 aa2.42□□□□□ -2.02
CHD9-218ENST00000566029 ZNF585BQ52M93 769 aa2.42□□□□□ -2.02
CHD9-218ENST00000566029 Q71RC1 249 aaPredicted RBP2.42□□□□□ -2.02
CHD9-218ENST00000566029 GAPTQ8N292 157 aa2.42□□□□□ -2.02
CHD9-218ENST00000566029 TPRP12270 2363 aaKnown RBP2.42□□□□□ -2.02
CHD9-218ENST00000566029 B9A039 149 aa2.42□□□□□ -2.02
CHD9-218ENST00000566029 GABRG2P18507 467 aa2.42□□□□□ -2.02
CHD9-218ENST00000566029 HSPE1P61604 102 aaKnown RBP2.42□□□□□ -2.02
CHD9-218ENST00000566029 GNG3P63215 75 aa2.42□□□□□ -2.02
CHD9-218ENST00000566029 OTORQ9NRC9 128 aa2.42□□□□□ -2.02
CHD9-218ENST00000566029 GAGE12BA1L429 117 aa2.42□□□□□ -2.02
CHD9-218ENST00000566029 ZNF785A8K8V0 405 aa2.42□□□□□ -2.02
CHD9-218ENST00000566029 NPIPB6E9PJ23 425 aa2.42□□□□□ -2.02
CHD9-218ENST00000566029 IL4P05112 153 aa2.42□□□□□ -2.02
CHD9-218ENST00000566029 SPINK9Q5DT21 86 aa2.42□□□□□ -2.02
CHD9-218ENST00000566029 PHLDA1Q8WV24 401 aaPredicted RBP2.42□□□□□ -2.02
CHD9-218ENST00000566029 XAGE1AQ9HD64 81 aa2.42□□□□□ -2.02
CHD9-218ENST00000566029 ZNF355PQ9NSJ1 428 aa2.42□□□□□ -2.02
CHD9-218ENST00000566029 PSENENQ9NZ42 101 aa2.42□□□□□ -2.02
CHD9-218ENST00000566029 LINC00312Q9Y6C7 94 aa2.42□□□□□ -2.02
CHD9-218ENST00000566029 DPRXA6NFQ7 191 aa2.42□□□□□ -2.02
CHD9-218ENST00000566029 FGF6P10767 208 aa2.42□□□□□ -2.02
CHD9-218ENST00000566029 CXCL17Q6UXB2 119 aa2.42□□□□□ -2.02
CHD9-218ENST00000566029 Q6ZS52 159 aa2.42□□□□□ -2.02
CHD9-218ENST00000566029 SYT8Q8NBV8 401 aa2.42□□□□□ -2.02
CHD9-218ENST00000566029 KIR2DL5BQ8NHK3 375 aa2.42□□□□□ -2.02
CHD9-218ENST00000566029 FAM57AQ8TBR7 257 aa2.42□□□□□ -2.02
CHD9-218ENST00000566029 C9orf118A6NHY6 69 aa2.42□□□□□ -2.02
CHD9-218ENST00000566029 E9PLN8 166 aa2.42□□□□□ -2.02
CHD9-218ENST00000566029 DRD3P35462 400 aa2.42□□□□□ -2.02
CHD9-218ENST00000566029 PTGDSP41222 190 aa2.42□□□□□ -2.02
CHD9-218ENST00000566029 DAD1P61803 113 aa2.42□□□□□ -2.02
CHD9-218ENST00000566029 DAZAP2Q15038 168 aaPredicted RBP2.42□□□□□ -2.02
CHD9-218ENST00000566029 ANKRD37Q7Z713 158 aa2.42□□□□□ -2.02
CHD9-218ENST00000566029 OR1F12Q8NHA8 337 aa2.42□□□□□ -2.02
CHD9-218ENST00000566029 PRELID3AQ96N28 172 aa2.42□□□□□ -2.02
CHD9-218ENST00000566029 HLA-DQA1P01909 254 aa2.42□□□□□ -2.02
CHD9-218ENST00000566029 IFITM1P13164 125 aa2.42□□□□□ -2.02
CHD9-218ENST00000566029 TIMP3P35625 211 aa2.42□□□□□ -2.02
CHD9-218ENST00000566029 INSL3P51460 131 aa2.42□□□□□ -2.02
CHD9-218ENST00000566029 OR10J3Q5JRS4 329 aa2.42□□□□□ -2.02
CHD9-218ENST00000566029 TMEM215Q68D42 235 aa2.42□□□□□ -2.02
CHD9-218ENST00000566029 DLX4Q92988 240 aaPredicted RBP2.42□□□□□ -2.02
CHD9-218ENST00000566029 RCHY1Q96PM5 261 aa2.42□□□□□ -2.02
CHD9-218ENST00000566029 CRIM1Q9NZV1 1036 aa2.42□□□□□ -2.02
CHD9-218ENST00000566029 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa2.41□□□□□ -2.02
CHD9-218ENST00000566029 H3BMM0 161 aa2.41□□□□□ -2.02
CHD9-218ENST00000566029 J3QLI3 93 aa2.41□□□□□ -2.02
CHD9-218ENST00000566029 GPR183P32249 361 aa2.41□□□□□ -2.02
CHD9-218ENST00000566029 SNRNP40Q96DI7 357 aaKnown RBP2.41□□□□□ -2.02
CHD9-218ENST00000566029 PRDM6Q9NQX0 595 aa2.41□□□□□ -2.02
CHD9-218ENST00000566029 JPT1Q9UK76 154 aa2.41□□□□□ -2.02
CHD9-218ENST00000566029 APC2O95996 2303 aa2.41□□□□□ -2.02
CHD9-218ENST00000566029 C11orf94C9JXX5 98 aa2.41□□□□□ -2.02
CHD9-218ENST00000566029 NPIPB11E5RHQ5 1161 aa2.41□□□□□ -2.02
CHD9-218ENST00000566029 GAGE13Q4V321 117 aa2.41□□□□□ -2.02
CHD9-218ENST00000566029 OR10D3Q8NH80 312 aa2.41□□□□□ -2.02
CHD9-218ENST00000566029 PEMTQ9UBM1 199 aa2.41□□□□□ -2.02
CHD9-218ENST00000566029 TRAV21A0A0B4J279 112 aa2.41□□□□□ -2.02
CHD9-218ENST00000566029 RAC3P60763 192 aa2.41□□□□□ -2.02
CHD9-218ENST00000566029 CXCL6P80162 114 aa2.41□□□□□ -2.02
CHD9-218ENST00000566029 CD300EQ496F6 205 aaPredicted RBP2.41□□□□□ -2.02
CHD9-218ENST00000566029 C16orf52Q8NHV5 167 aa2.41□□□□□ -2.02
CHD9-218ENST00000566029 OCC1Q8TAD7 63 aa2.41□□□□□ -2.02
CHD9-218ENST00000566029 CACNA1BQ00975 2339 aa2.41□□□□□ -2.02
CHD9-218ENST00000566029 IGKV1-27A0A075B6S5 117 aa2.41□□□□□ -2.02
CHD9-218ENST00000566029 TRBV6-6A0A0A6YYG2 114 aa2.41□□□□□ -2.02
CHD9-218ENST00000566029 H0YGG7 62 aa2.41□□□□□ -2.02
CHD9-218ENST00000566029 OVOL1O14753 267 aa2.41□□□□□ -2.02
CHD9-218ENST00000566029 DHHO43323 396 aa2.41□□□□□ -2.02
CHD9-218ENST00000566029 GDF5OSQ5U4N7 250 aa2.41□□□□□ -2.02
CHD9-218ENST00000566029 TMEM42Q69YG0 159 aa2.41□□□□□ -2.02
CHD9-218ENST00000566029 ZNF784Q8NCA9 323 aaPredicted RBP2.41□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms