RNA–Protein interactions for RNA: ENST00000564582.2

CHD9-210, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 3

Gene CHD9, Length 968 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-210ENST00000564582 ZNF766Q5HY98 468 aa4.5□□□□□ -1.69
CHD9-210ENST00000564582 DMRTC1Q5HYR2 192 aa4.5□□□□□ -1.69
CHD9-210ENST00000564582 CARD17Q5XLA6 110 aa4.5□□□□□ -1.69
CHD9-210ENST00000564582 Q6ZSV7 163 aa4.5□□□□□ -1.69
CHD9-210ENST00000564582 PRR26Q8N8Z3 221 aa4.5□□□□□ -1.69
CHD9-210ENST00000564582 NUP35Q8NFH5 326 aa4.5□□□□□ -1.69
CHD9-210ENST00000564582 OR10D3Q8NH80 312 aa4.5□□□□□ -1.69
CHD9-210ENST00000564582 OR1L3Q8NH93 324 aa4.5□□□□□ -1.69
CHD9-210ENST00000564582 LRRC29Q8WV35 223 aa4.5□□□□□ -1.69
CHD9-210ENST00000564582 GTSF1Q8WW33 167 aa4.5□□□□□ -1.69
CHD9-210ENST00000564582 ARPC1AQ92747 370 aa4.5□□□□□ -1.69
CHD9-210ENST00000564582 TSACCQ96A04 125 aaPredicted RBP4.5□□□□□ -1.69
CHD9-210ENST00000564582 ZNF501Q96CX3 271 aaPredicted RBP4.5□□□□□ -1.69
CHD9-210ENST00000564582 RNF183Q96D59 192 aa4.5□□□□□ -1.69
CHD9-210ENST00000564582 ZNF479Q96JC4 524 aa4.5□□□□□ -1.69
CHD9-210ENST00000564582 IGF2BP2-AS1Q96M15 143 aa4.5□□□□□ -1.69
CHD9-210ENST00000564582 CDX2Q99626 313 aaPredicted RBP4.5□□□□□ -1.69
CHD9-210ENST00000564582 FAM110AQ9BQ89 295 aa4.5□□□□□ -1.69
CHD9-210ENST00000564582 SPXQ9BT56 116 aa4.5□□□□□ -1.69
CHD9-210ENST00000564582 WDR54Q9H977 334 aa4.5□□□□□ -1.69
CHD9-210ENST00000564582 RALYQ9UKM9 306 aaKnown RBP4.5□□□□□ -1.69
CHD9-210ENST00000564582 PRNDQ9UKY0 176 aa4.5□□□□□ -1.69
CHD9-210ENST00000564582 KLF12Q9Y4X4 402 aa4.5□□□□□ -1.69
CHD9-210ENST00000564582 MUC22E2RYF6 1773 aaPredicted RBP4.5□□□□□ -1.69
CHD9-210ENST00000564582 MYOFQ9NZM1 2061 aa4.49□□□□□ -1.69
CHD9-210ENST00000564582 ATG2AQ2TAZ0 1938 aa4.49□□□□□ -1.69
CHD9-210ENST00000564582 TRBV20-1A0A075B6N2 111 aa4.49□□□□□ -1.69
CHD9-210ENST00000564582 LOC102724200A0A096LPH7 203 aaPredicted RBP4.49□□□□□ -1.69
CHD9-210ENST00000564582 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP4.49□□□□□ -1.69
CHD9-210ENST00000564582 TMEM8BA6NDV4 472 aa4.49□□□□□ -1.69
CHD9-210ENST00000564582 LINC01549A6NIU2 74 aa4.49□□□□□ -1.69
CHD9-210ENST00000564582 HIGD1CA8MV81 97 aa4.49□□□□□ -1.69
CHD9-210ENST00000564582 SLC25A17O43808 307 aa4.49□□□□□ -1.69
CHD9-210ENST00000564582 ZG16O60844 167 aa4.49□□□□□ -1.69
CHD9-210ENST00000564582 SAP30O75446 220 aa4.49□□□□□ -1.69
CHD9-210ENST00000564582 KLF7O75840 302 aaPredicted RBP4.49□□□□□ -1.69
CHD9-210ENST00000564582 P01737 135 aa4.49□□□□□ -1.69
CHD9-210ENST00000564582 IGHV3-7P01780 117 aa4.49□□□□□ -1.69
CHD9-210ENST00000564582 CLEC3BP05452 202 aa4.49□□□□□ -1.69
CHD9-210ENST00000564582 PRSS2P07478 247 aa4.49□□□□□ -1.69
CHD9-210ENST00000564582 VDAC2P45880 294 aaPredicted RBP4.49□□□□□ -1.69
CHD9-210ENST00000564582 HSPE1P61604 102 aaKnown RBP4.49□□□□□ -1.69
CHD9-210ENST00000564582 RPL30P62888 115 aaKnown RBP4.49□□□□□ -1.69
CHD9-210ENST00000564582 SLC35B1P78383 322 aa4.49□□□□□ -1.69
CHD9-210ENST00000564582 TFF3Q07654 80 aa4.49□□□□□ -1.69
CHD9-210ENST00000564582 OR1C1Q15619 314 aa4.49□□□□□ -1.69
CHD9-210ENST00000564582 KIAA1644Q3SXP7 199 aa4.49□□□□□ -1.69
CHD9-210ENST00000564582 PRAMEF5Q5TYX0 476 aa4.49□□□□□ -1.69
CHD9-210ENST00000564582 PRAMEF6Q5VXH4 476 aa4.49□□□□□ -1.69
CHD9-210ENST00000564582 LCN12Q6JVE5 192 aa4.49□□□□□ -1.69
CHD9-210ENST00000564582 Q6Q795 121 aa4.49□□□□□ -1.69
CHD9-210ENST00000564582 DOLPP1Q86YN1 238 aa4.49□□□□□ -1.69
CHD9-210ENST00000564582 UBALD2Q8IYN6 164 aa4.49□□□□□ -1.69
CHD9-210ENST00000564582 Q8N7P7 452 aa4.49□□□□□ -1.69
CHD9-210ENST00000564582 IL1F10Q8WWZ1 152 aa4.49□□□□□ -1.69
CHD9-210ENST00000564582 ZNF524Q96C55 264 aa4.49□□□□□ -1.69
CHD9-210ENST00000564582 MGST2Q99735 147 aa4.49□□□□□ -1.69
CHD9-210ENST00000564582 TMEM126AQ9H061 195 aa4.49□□□□□ -1.69
CHD9-210ENST00000564582 GTSF1LQ9H1H1 148 aa4.49□□□□□ -1.69
CHD9-210ENST00000564582 RPP21Q9H633 154 aaKnown RBP4.49□□□□□ -1.69
CHD9-210ENST00000564582 HCFC1R1Q9NWW0 138 aa4.49□□□□□ -1.69
CHD9-210ENST00000564582 ERG28Q9UKR5 140 aa4.49□□□□□ -1.69
CHD9-210ENST00000564582 ZNF835Q9Y2P0 537 aa4.49□□□□□ -1.69
CHD9-210ENST00000564582 KMT2EQ8IZD2 1858 aa4.49□□□□□ -1.69
CHD9-210ENST00000564582 COL5A1P20908 1838 aaPredicted RBP4.49□□□□□ -1.69
CHD9-210ENST00000564582 SNRNP200O75643 2136 aaKnown RBP4.48□□□□□ -1.69
CHD9-210ENST00000564582 THADAQ6YHU6 1953 aa4.48□□□□□ -1.69
CHD9-210ENST00000564582 TRAV26-1A0A087WT03 109 aa4.48□□□□□ -1.69
CHD9-210ENST00000564582 A0A087X0K7 114 aa4.48□□□□□ -1.69
CHD9-210ENST00000564582 TRAV24A0A0B4J272 114 aa4.48□□□□□ -1.69
CHD9-210ENST00000564582 TEX48A0A1B0GUV7 120 aa4.48□□□□□ -1.69
CHD9-210ENST00000564582 A0A1W2PRD5 423 aa4.48□□□□□ -1.69
CHD9-210ENST00000564582 A0A1W2PRF3 423 aa4.48□□□□□ -1.69
CHD9-210ENST00000564582 A0A1W2PRM7 423 aa4.48□□□□□ -1.69
CHD9-210ENST00000564582 E9PLD3 99 aa4.48□□□□□ -1.69
CHD9-210ENST00000564582 F2Z2F3 143 aa4.48□□□□□ -1.69
CHD9-210ENST00000564582 INS-IGF2F8WCM5 200 aa4.48□□□□□ -1.69
CHD9-210ENST00000564582 ATP5LO75964 103 aa4.48□□□□□ -1.69
CHD9-210ENST00000564582 ZNF32P17041 273 aa4.48□□□□□ -1.69
CHD9-210ENST00000564582 GABRG2P18507 467 aa4.48□□□□□ -1.69
CHD9-210ENST00000564582 S100A7P31151 101 aa4.48□□□□□ -1.69
CHD9-210ENST00000564582 DUTP33316 252 aaKnown RBP4.48□□□□□ -1.69
CHD9-210ENST00000564582 RPL8P62917 257 aaKnown RBP4.48□□□□□ -1.69
CHD9-210ENST00000564582 Q0VFX4 171 aa4.48□□□□□ -1.69
CHD9-210ENST00000564582 EIF4EBP1Q13541 118 aaPredicted RBP4.48□□□□□ -1.69
CHD9-210ENST00000564582 GUSBP1Q15486 140 aa4.48□□□□□ -1.69
CHD9-210ENST00000564582 MRPL23Q16540 153 aaKnown RBP4.48□□□□□ -1.69
CHD9-210ENST00000564582 ZFAND6Q6FIF0 208 aa4.48□□□□□ -1.69
CHD9-210ENST00000564582 ADAMTSL5Q6ZMM2 481 aa4.48□□□□□ -1.69
CHD9-210ENST00000564582 LIN28BQ6ZN17 250 aaKnown RBP eCLIP4.48□□□□□ -1.69
CHD9-210ENST00000564582 SSX8Q7RTT4 187 aa4.48□□□□□ -1.69
CHD9-210ENST00000564582 AAED1Q7RTV5 226 aa4.48□□□□□ -1.69
CHD9-210ENST00000564582 ATOH7Q8N100 152 aa4.48□□□□□ -1.69
CHD9-210ENST00000564582 TEX29Q8N6K0 151 aa4.48□□□□□ -1.69
CHD9-210ENST00000564582 ZNF714Q96N38 554 aa4.48□□□□□ -1.69
CHD9-210ENST00000564582 NABP2Q9BQ15 211 aa4.48□□□□□ -1.69
CHD9-210ENST00000564582 SLC25A33Q9BSK2 321 aa4.48□□□□□ -1.69
CHD9-210ENST00000564582 PHF7Q9BWX1 381 aaPredicted RBP4.48□□□□□ -1.69
CHD9-210ENST00000564582 PILRBQ9UKJ0 227 aa4.48□□□□□ -1.69
CHD9-210ENST00000564582 FOXA2Q9Y261 457 aaPredicted RBP4.48□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms