RNA–Protein interactions for RNA: ENST00000561673.1

CLK3-205, Transcript of CDC like kinase 3, humanhuman

TSL 3

Gene CLK3, Length 639 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-205ENST00000561673 GRAMD2BQ96HH9 432 aa7.52□□□□□ -1.21
CLK3-205ENST00000561673 FRAS1Q86XX4 4008 aa7.52□□□□□ -1.21
CLK3-205ENST00000561673 HELTA6NFD8 242 aa7.51□□□□□ -1.21
CLK3-205ENST00000561673 KNCNA6PVL3 124 aa7.51□□□□□ -1.21
CLK3-205ENST00000561673 PITX3O75364 302 aa7.51□□□□□ -1.21
CLK3-205ENST00000561673 TOMM40O96008 361 aa7.51□□□□□ -1.21
CLK3-205ENST00000561673 IFNA4P05014 189 aa7.51□□□□□ -1.21
CLK3-205ENST00000561673 PSG1P11464 419 aa7.51□□□□□ -1.21
CLK3-205ENST00000561673 S100A5P33763 92 aa7.51□□□□□ -1.21
CLK3-205ENST00000561673 GPX4P36969 197 aaPredicted RBP7.51□□□□□ -1.21
CLK3-205ENST00000561673 DHRS2Q13268 280 aa7.51□□□□□ -1.21
CLK3-205ENST00000561673 CCDC190Q86UF4 302 aa7.51□□□□□ -1.21
CLK3-205ENST00000561673 OR1S1Q8NH92 325 aa7.51□□□□□ -1.21
CLK3-205ENST00000561673 LINC00476Q8WZB0 136 aa7.51□□□□□ -1.21
CLK3-205ENST00000561673 DNAH10Q8IVF4 4471 aa7.51□□□□□ -1.21
CLK3-205ENST00000561673 ELOA3CA0A087WX78 387 aaPredicted RBP7.5□□□□□ -1.21
CLK3-205ENST00000561673 PIGBOS1A0A0B4J2F0 54 aa7.5□□□□□ -1.21
CLK3-205ENST00000561673 DUXBA0A1W2PPF3 345 aa7.5□□□□□ -1.21
CLK3-205ENST00000561673 DEFB4AO15263 64 aa7.5□□□□□ -1.21
CLK3-205ENST00000561673 BUB3O43684 328 aa7.5□□□□□ -1.21
CLK3-205ENST00000561673 LY6G6CO95867 125 aa7.5□□□□□ -1.21
CLK3-205ENST00000561673 EIF2B2P49770 351 aaKnown RBP7.5□□□□□ -1.21
CLK3-205ENST00000561673 AP2S1P53680 142 aaPredicted RBP7.5□□□□□ -1.21
CLK3-205ENST00000561673 ATP5IP56385 69 aaPredicted RBP7.5□□□□□ -1.21
CLK3-205ENST00000561673 NANOS2P60321 138 aaKnown RBP7.5□□□□□ -1.21
CLK3-205ENST00000561673 ZNF90Q03938 601 aa7.5□□□□□ -1.21
CLK3-205ENST00000561673 GAMTQ14353 236 aa7.5□□□□□ -1.21
CLK3-205ENST00000561673 ACTL10Q5JWF8 245 aa7.5□□□□□ -1.21
CLK3-205ENST00000561673 TRPT1Q86TN4 253 aaKnown RBP7.5□□□□□ -1.21
CLK3-205ENST00000561673 LRTM2Q8N967 370 aa7.5□□□□□ -1.21
CLK3-205ENST00000561673 OR51G1Q8NGK1 321 aa7.5□□□□□ -1.21
CLK3-205ENST00000561673 PHLDA1Q8WV24 401 aaPredicted RBP7.5□□□□□ -1.21
CLK3-205ENST00000561673 RAB40CQ96S21 281 aa7.5□□□□□ -1.21
CLK3-205ENST00000561673 SLC25A21Q9BQT8 299 aaPredicted RBP7.5□□□□□ -1.21
CLK3-205ENST00000561673 RBM38Q9H0Z9 239 aaKnown RBP7.5□□□□□ -1.21
CLK3-205ENST00000561673 C11orf68Q9H3H3 251 aaKnown RBP7.5□□□□□ -1.21
CLK3-205ENST00000561673 KLK5Q9Y337 293 aaPredicted RBP7.5□□□□□ -1.21
CLK3-205ENST00000561673 IGKV1D-37A0A075B6S9 117 aa7.49□□□□□ -1.21
CLK3-205ENST00000561673 LCE2BO14633 110 aa7.49□□□□□ -1.21
CLK3-205ENST00000561673 SFT2D2O95562 160 aa7.49□□□□□ -1.21
CLK3-205ENST00000561673 IAPPP10997 89 aa7.49□□□□□ -1.21
CLK3-205ENST00000561673 SLC25A6P12236 298 aa7.49□□□□□ -1.21
CLK3-205ENST00000561673 PPP1R1AQ13522 171 aa7.49□□□□□ -1.21
CLK3-205ENST00000561673 PSMG4Q5JS54 123 aa7.49□□□□□ -1.21
CLK3-205ENST00000561673 C11orf45Q8TAV5 145 aa7.49□□□□□ -1.21
CLK3-205ENST00000561673 DEDD2Q8WXF8 326 aa7.49□□□□□ -1.21
CLK3-205ENST00000561673 ZFP92A6NM28 416 aa7.48□□□□□ -1.21
CLK3-205ENST00000561673 FAM90A26D6RGX4 464 aa7.48□□□□□ -1.21
CLK3-205ENST00000561673 SPP1P10451 314 aa7.48□□□□□ -1.21
CLK3-205ENST00000561673 C4BPBP20851 252 aa7.48□□□□□ -1.21
CLK3-205ENST00000561673 SNRPD3P62318 126 aaKnown RBP7.48□□□□□ -1.21
CLK3-205ENST00000561673 SPANXN2Q5MJ10 180 aa7.48□□□□□ -1.21
CLK3-205ENST00000561673 MORN3Q6PF18 240 aaPredicted RBP7.48□□□□□ -1.21
CLK3-205ENST00000561673 SIGLEC15Q6ZMC9 328 aa7.48□□□□□ -1.21
CLK3-205ENST00000561673 RNF125Q96EQ8 232 aa7.48□□□□□ -1.21
CLK3-205ENST00000561673 PBDC1Q9BVG4 233 aa7.48□□□□□ -1.21
CLK3-205ENST00000561673 NRN1Q9NPD7 142 aa7.48□□□□□ -1.21
CLK3-205ENST00000561673 CLEC5AQ9NY25 188 aa7.48□□□□□ -1.21
CLK3-205ENST00000561673 FBXL17Q9UF56 701 aa7.48□□□□□ -1.21
CLK3-205ENST00000561673 TMED3Q9Y3Q3 217 aa7.48□□□□□ -1.21
CLK3-205ENST00000561673 ZNF701M0R085 212 aaPredicted RBP7.47□□□□□ -1.21
CLK3-205ENST00000561673 MED6O75586 246 aa7.47□□□□□ -1.21
CLK3-205ENST00000561673 HOXB5P09067 269 aa7.47□□□□□ -1.21
CLK3-205ENST00000561673 RBMY1A1P0DJD3 496 aaKnown RBP7.47□□□□□ -1.21
CLK3-205ENST00000561673 RBMY1CP0DJD4 496 aa7.47□□□□□ -1.21
CLK3-205ENST00000561673 RAB11AP62491 216 aa7.47□□□□□ -1.21
CLK3-205ENST00000561673 RBMY1FQ15415 496 aaKnown RBP7.47□□□□□ -1.21
CLK3-205ENST00000561673 BAK1Q16611 211 aa7.47□□□□□ -1.21
CLK3-205ENST00000561673 TMEM41BQ5BJD5 291 aa7.47□□□□□ -1.21
CLK3-205ENST00000561673 CENPSQ8N2Z9 138 aa7.47□□□□□ -1.21
CLK3-205ENST00000561673 Q8NAQ8 132 aa7.47□□□□□ -1.21
CLK3-205ENST00000561673 CSNK1G2-AS1Q8NCQ2 148 aa7.47□□□□□ -1.21
CLK3-205ENST00000561673 SLC35E1Q96K37 410 aa7.47□□□□□ -1.21
CLK3-205ENST00000561673 SRRQ9GZT4 340 aa7.47□□□□□ -1.21
CLK3-205ENST00000561673 MFFQ9GZY8 342 aa7.47□□□□□ -1.21
CLK3-205ENST00000561673 MAGT1Q9H0U3 335 aa7.47□□□□□ -1.21
CLK3-205ENST00000561673 SEPSECSQ9HD40 501 aaKnown RBP7.47□□□□□ -1.21
CLK3-205ENST00000561673 PAIP2BQ9ULR5 123 aaKnown RBP7.47□□□□□ -1.21
CLK3-205ENST00000561673 IGKV1OR2-108A0A075B7D4 117 aa7.46□□□□□ -1.22
CLK3-205ENST00000561673 IGHV4-28A0A0C4DH34 117 aa7.46□□□□□ -1.22
CLK3-205ENST00000561673 ZNF705EA8MWA4 302 aaPredicted RBP7.46□□□□□ -1.22
CLK3-205ENST00000561673 SNRPGP15A8MWD9 76 aa7.46□□□□□ -1.22
CLK3-205ENST00000561673 H3BMM0 161 aa7.46□□□□□ -1.22
CLK3-205ENST00000561673 WRBO00258 174 aa7.46□□□□□ -1.22
CLK3-205ENST00000561673 SYNGR2O43760 224 aa7.46□□□□□ -1.22
CLK3-205ENST00000561673 LYZP61626 148 aa7.46□□□□□ -1.22
CLK3-205ENST00000561673 OR2F1Q13607 317 aa7.46□□□□□ -1.22
CLK3-205ENST00000561673 GGNBP1Q5YKI7 109 aa7.46□□□□□ -1.22
CLK3-205ENST00000561673 OR8G2PQ6IF36 304 aa7.46□□□□□ -1.22
CLK3-205ENST00000561673 CIB3Q96Q77 187 aaPredicted RBP7.46□□□□□ -1.22
CLK3-205ENST00000561673 TRGV9Q99603 122 aa7.46□□□□□ -1.22
CLK3-205ENST00000561673 WDR12Q9GZL7 423 aaKnown RBP7.46□□□□□ -1.22
CLK3-205ENST00000561673 PFDN2Q9UHV9 154 aa7.46□□□□□ -1.22
CLK3-205ENST00000561673 FLVCR2Q9UPI3 526 aa7.46□□□□□ -1.22
CLK3-205ENST00000561673 X6R8D5 127 aa7.46□□□□□ -1.22
CLK3-205ENST00000561673 DNAH6Q9C0G6 4158 aa7.45□□□□□ -1.22
CLK3-205ENST00000561673 C9orf170A2RU37 121 aa7.45□□□□□ -1.22
CLK3-205ENST00000561673 PRSS46E5RG02 174 aa7.45□□□□□ -1.22
CLK3-205ENST00000561673 FABP1P07148 127 aa7.45□□□□□ -1.22
CLK3-205ENST00000561673 MIFP14174 115 aa7.45□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms