RNA–Protein interactions for RNA: ENST00000561242.1

TPM1-229, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 673 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-229ENST00000561242 MPDU1O75352 247 aa8.17□□□□□ -1.1
TPM1-229ENST00000561242 HYPMO75409 117 aa8.17□□□□□ -1.1
TPM1-229ENST00000561242 MPC2O95563 127 aa8.17□□□□□ -1.1
TPM1-229ENST00000561242 GIPP09681 153 aaPredicted RBP8.17□□□□□ -1.1
TPM1-229ENST00000561242 IGLC1P0CG04 106 aa8.17□□□□□ -1.1
TPM1-229ENST00000561242 PSG1P11464 419 aa8.17□□□□□ -1.1
TPM1-229ENST00000561242 RPL12P30050 165 aaKnown RBP8.17□□□□□ -1.1
TPM1-229ENST00000561242 FCN2Q15485 313 aa8.17□□□□□ -1.1
TPM1-229ENST00000561242 DEFB114Q30KQ6 69 aa8.17□□□□□ -1.1
TPM1-229ENST00000561242 PXDC1Q5TGL8 231 aa8.17□□□□□ -1.1
TPM1-229ENST00000561242 BTNL8Q6UX41 500 aa8.17□□□□□ -1.1
TPM1-229ENST00000561242 CYP2G1PQ6ZSU1 146 aa8.17□□□□□ -1.1
TPM1-229ENST00000561242 OR8I2Q8N0Y5 310 aa8.17□□□□□ -1.1
TPM1-229ENST00000561242 OR1L4Q8NGR5 311 aa8.17□□□□□ -1.1
TPM1-229ENST00000561242 RNF125Q96EQ8 232 aa8.17□□□□□ -1.1
TPM1-229ENST00000561242 SMAD5-AS1Q9Y6J3 95 aa8.17□□□□□ -1.1
TPM1-229ENST00000561242 FBN1P35555 2871 aaKnown RBP8.16□□□□□ -1.1
TPM1-229ENST00000561242 IGKV3-7A0A075B6H7 116 aa8.16□□□□□ -1.1
TPM1-229ENST00000561242 FXYD6-FXYD2A0A087WZ82 144 aa8.16□□□□□ -1.1
TPM1-229ENST00000561242 BORCS7-ASMTA0A0B4J1R7 106 aa8.16□□□□□ -1.1
TPM1-229ENST00000561242 IGLV1-51P01701 117 aa8.16□□□□□ -1.1
TPM1-229ENST00000561242 FGF7P21781 194 aa8.16□□□□□ -1.1
TPM1-229ENST00000561242 ADMP35318 185 aa8.16□□□□□ -1.1
TPM1-229ENST00000561242 ID1P41134 155 aa8.16□□□□□ -1.1
TPM1-229ENST00000561242 GALR1P47211 349 aa8.16□□□□□ -1.1
TPM1-229ENST00000561242 TFPI2P48307 235 aa8.16□□□□□ -1.1
TPM1-229ENST00000561242 CAMLGP49069 296 aa8.16□□□□□ -1.1
TPM1-229ENST00000561242 CD300EQ496F6 205 aaPredicted RBP8.16□□□□□ -1.1
TPM1-229ENST00000561242 SAMD13Q5VXD3 122 aa8.16□□□□□ -1.1
TPM1-229ENST00000561242 C11orf87Q6NUJ2 197 aa8.16□□□□□ -1.1
TPM1-229ENST00000561242 UNQ9165/PRO28630Q6UXU0 137 aa8.16□□□□□ -1.1
TPM1-229ENST00000561242 TCF24Q7RTU0 167 aa8.16□□□□□ -1.1
TPM1-229ENST00000561242 WFDC3Q8IUB2 231 aa8.16□□□□□ -1.1
TPM1-229ENST00000561242 SPAG8Q99932 426 aaPredicted RBP8.16□□□□□ -1.1
TPM1-229ENST00000561242 HIGD1AQ9Y241 93 aa8.16□□□□□ -1.1
TPM1-229ENST00000561242 COL6A5A8TX70 2615 aa8.16□□□□□ -1.1
TPM1-229ENST00000561242 IGHV3OR16-13A0A075B7E8 117 aa8.15□□□□□ -1.1
TPM1-229ENST00000561242 ELOA3CA0A087WX78 387 aaPredicted RBP8.15□□□□□ -1.1
TPM1-229ENST00000561242 IGHV3-74A0A0B4J1X5 117 aa8.15□□□□□ -1.1
TPM1-229ENST00000561242 IGHV3-66A0A0C4DH42 116 aa8.15□□□□□ -1.1
TPM1-229ENST00000561242 UBE2L5PA0A1B0GUS4 154 aa8.15□□□□□ -1.1
TPM1-229ENST00000561242 TMEM213A2RRL7 107 aa8.15□□□□□ -1.1
TPM1-229ENST00000561242 C4BPBP20851 252 aa8.15□□□□□ -1.1
TPM1-229ENST00000561242 H2BFSP57053 126 aa8.15□□□□□ -1.1
TPM1-229ENST00000561242 CD81P60033 236 aa8.15□□□□□ -1.1
TPM1-229ENST00000561242 SNRPD3P62318 126 aaKnown RBP8.15□□□□□ -1.1
TPM1-229ENST00000561242 EWSR1Q01844 656 aaKnown RBP eCLIP8.15□□□□□ -1.1
TPM1-229ENST00000561242 ZNF266Q14584 549 aa8.15□□□□□ -1.1
TPM1-229ENST00000561242 CLINT1Q14677 625 aa8.15□□□□□ -1.1
TPM1-229ENST00000561242 BEAN1Q3B7T3 259 aa8.15□□□□□ -1.1
TPM1-229ENST00000561242 STXBP6Q8NFX7 210 aa8.15□□□□□ -1.1
TPM1-229ENST00000561242 OR5C1Q8NGR4 320 aa8.15□□□□□ -1.1
TPM1-229ENST00000561242 OR2T35Q8NGX2 323 aa8.15□□□□□ -1.1
TPM1-229ENST00000561242 GPR82Q96P67 336 aa8.15□□□□□ -1.1
TPM1-229ENST00000561242 PRR25Q96S07 402 aa8.15□□□□□ -1.1
TPM1-229ENST00000561242 PFDN5Q99471 154 aa8.15□□□□□ -1.1
TPM1-229ENST00000561242 ARL6Q9H0F7 186 aa8.15□□□□□ -1.1
TPM1-229ENST00000561242 MBD2Q9UBB5 411 aa8.15□□□□□ -1.1
TPM1-229ENST00000561242 CHEK1O14757 476 aa8.14□□□□□ -1.11
TPM1-229ENST00000561242 CCNKO75909 580 aa8.14□□□□□ -1.11
TPM1-229ENST00000561242 IGKV1-17P01599 117 aa8.14□□□□□ -1.11
TPM1-229ENST00000561242 LINC00869P0C866 280 aa8.14□□□□□ -1.11
TPM1-229ENST00000561242 ATF4P18848 351 aaPredicted RBP8.14□□□□□ -1.11
TPM1-229ENST00000561242 PAX9P55771 341 aa8.14□□□□□ -1.11
TPM1-229ENST00000561242 ZNF90Q03938 601 aa8.14□□□□□ -1.11
TPM1-229ENST00000561242 HAPLN4Q86UW8 402 aa8.14□□□□□ -1.11
TPM1-229ENST00000561242 THAP8Q8NA92 274 aa8.14□□□□□ -1.11
TPM1-229ENST00000561242 ATP5SQ99766 215 aa8.14□□□□□ -1.11
TPM1-229ENST00000561242 SLC25A22Q9H936 323 aa8.14□□□□□ -1.11
TPM1-229ENST00000561242 OR5AC2Q9NZP5 309 aa8.14□□□□□ -1.11
TPM1-229ENST00000561242 SLC45A2Q9UMX9 530 aa8.14□□□□□ -1.11
TPM1-229ENST00000561242 OR11H12B2RN74 326 aa8.13□□□□□ -1.11
TPM1-229ENST00000561242 F8W735 103 aaPredicted RBP8.13□□□□□ -1.11
TPM1-229ENST00000561242 TSPAN4O14817 238 aa8.13□□□□□ -1.11
TPM1-229ENST00000561242 AGPAT2O15120 278 aa8.13□□□□□ -1.11
TPM1-229ENST00000561242 C8orf88P0DMB2 117 aa8.13□□□□□ -1.11
TPM1-229ENST00000561242 CRYBB3P26998 211 aa8.13□□□□□ -1.11
TPM1-229ENST00000561242 NHLH2Q02577 135 aa8.13□□□□□ -1.11
TPM1-229ENST00000561242 EGFEM1PQ0D2K5 195 aa8.13□□□□□ -1.11
TPM1-229ENST00000561242 C1orf194Q5T5A4 169 aa8.13□□□□□ -1.11
TPM1-229ENST00000561242 C10orf113Q5VZT2 155 aa8.13□□□□□ -1.11
TPM1-229ENST00000561242 GBGT1Q8N5D6 347 aa8.13□□□□□ -1.11
TPM1-229ENST00000561242 TMEM170AQ8WVE7 144 aa8.13□□□□□ -1.11
TPM1-229ENST00000561242 WDR89Q96FK6 387 aaPredicted RBP8.13□□□□□ -1.11
TPM1-229ENST00000561242 NEURL2Q9BR09 285 aa8.13□□□□□ -1.11
TPM1-229ENST00000561242 SMIM3Q9BZL3 60 aa8.13□□□□□ -1.11
TPM1-229ENST00000561242 AURKAIP1Q9NWT8 199 aaPredicted RBP8.13□□□□□ -1.11
TPM1-229ENST00000561242 DOK5Q9P104 306 aa8.13□□□□□ -1.11
TPM1-229ENST00000561242 A0A1W2PPV4 95 aa8.12□□□□□ -1.11
TPM1-229ENST00000561242 IGSF23A1L1A6 192 aa8.12□□□□□ -1.11
TPM1-229ENST00000561242 WIPF1O43516 503 aa8.12□□□□□ -1.11
TPM1-229ENST00000561242 PRB2P02812 416 aaPredicted RBP8.12□□□□□ -1.11
TPM1-229ENST00000561242 RPL7P18124 248 aaKnown RBP8.12□□□□□ -1.11
TPM1-229ENST00000561242 CXCL3P19876 107 aa8.12□□□□□ -1.11
TPM1-229ENST00000561242 MEOX2P50222 304 aa8.12□□□□□ -1.11
TPM1-229ENST00000561242 B2MP61769 119 aa8.12□□□□□ -1.11
TPM1-229ENST00000561242 EIF5AP63241 154 aaKnown RBP8.12□□□□□ -1.11
TPM1-229ENST00000561242 KPRPQ5T749 579 aaPredicted RBP8.12□□□□□ -1.11
TPM1-229ENST00000561242 SIGLEC15Q6ZMC9 328 aa8.12□□□□□ -1.11
TPM1-229ENST00000561242 ST8SIA2Q92186 375 aa8.12□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms