RNA–Protein interactions for RNA: ENST00000560962.5

USP3-AS1-208, USP3 antisense RNA 1, humanhuman

TSL 2

Gene USP3-AS1, Length 1,807 nt, Biotype antisense RNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-AS1-208ENST00000560962 CST9LP1Q5W188 147 aa13.94□□□□□ -0.18
USP3-AS1-208ENST00000560962 MRPL32Q9BYC8 188 aaKnown RBP13.94□□□□□ -0.18
USP3-AS1-208ENST00000560962 C21orf62Q9NYP8 219 aa13.94□□□□□ -0.18
USP3-AS1-208ENST00000560962 TRAV41A0A0B4J266 112 aa13.94□□□□□ -0.18
USP3-AS1-208ENST00000560962 GNG7O60262 68 aa13.94□□□□□ -0.18
USP3-AS1-208ENST00000560962 C8orf88P0DMB2 117 aa13.94□□□□□ -0.18
USP3-AS1-208ENST00000560962 TAGLN2P37802 199 aaKnown RBP13.94□□□□□ -0.18
USP3-AS1-208ENST00000560962 TAS2R45P59539 299 aa13.94□□□□□ -0.18
USP3-AS1-208ENST00000560962 Q56UQ5 140 aa13.94□□□□□ -0.18
USP3-AS1-208ENST00000560962 C19orf54Q5BKX5 351 aa13.94□□□□□ -0.18
USP3-AS1-208ENST00000560962 CLRN3Q8NCR9 226 aa13.94□□□□□ -0.18
USP3-AS1-208ENST00000560962 ZNF503Q96F45 646 aa13.94□□□□□ -0.18
USP3-AS1-208ENST00000560962 MS4A10Q96PG2 267 aa13.94□□□□□ -0.18
USP3-AS1-208ENST00000560962 PUS1Q9Y606 427 aaKnown RBP eCLIP13.94□□□□□ -0.18
USP3-AS1-208ENST00000560962 FLNAP21333 2647 aaKnown RBP13.94□□□□□ -0.18
USP3-AS1-208ENST00000560962 C11orf94C9JXX5 98 aa13.93□□□□□ -0.18
USP3-AS1-208ENST00000560962 F8W735 103 aaPredicted RBP13.93□□□□□ -0.18
USP3-AS1-208ENST00000560962 HYPMO75409 117 aa13.93□□□□□ -0.18
USP3-AS1-208ENST00000560962 IGF1P05019 195 aa13.93□□□□□ -0.18
USP3-AS1-208ENST00000560962 RD3LP0DJH9 198 aa13.93□□□□□ -0.18
USP3-AS1-208ENST00000560962 ATP5G3P48201 142 aa13.93□□□□□ -0.18
USP3-AS1-208ENST00000560962 LYZP61626 148 aa13.93□□□□□ -0.18
USP3-AS1-208ENST00000560962 FAM90A2PQ658T7 463 aa13.93□□□□□ -0.18
USP3-AS1-208ENST00000560962 Q6ZS46 218 aa13.93□□□□□ -0.18
USP3-AS1-208ENST00000560962 LINC00305Q7Z4B0 112 aa13.93□□□□□ -0.18
USP3-AS1-208ENST00000560962 SREK1IP1Q8N9Q2 155 aaPredicted RBP13.93□□□□□ -0.18
USP3-AS1-208ENST00000560962 C20orf24Q9BUV8 137 aa13.93□□□□□ -0.18
USP3-AS1-208ENST00000560962 SLC25A2Q9BXI2 301 aa13.93□□□□□ -0.18
USP3-AS1-208ENST00000560962 VPREB3Q9UKI3 123 aa13.93□□□□□ -0.18
USP3-AS1-208ENST00000560962 ELOA3CA0A087WX78 387 aaPredicted RBP13.92□□□□□ -0.18
USP3-AS1-208ENST00000560962 OR10J4P0C629 311 aa13.92□□□□□ -0.18
USP3-AS1-208ENST00000560962 RHOGP84095 191 aa13.92□□□□□ -0.18
USP3-AS1-208ENST00000560962 OR5AU1Q8NGC0 362 aa13.92□□□□□ -0.18
USP3-AS1-208ENST00000560962 FAM167A-AS1Q96KT0 104 aa13.92□□□□□ -0.18
USP3-AS1-208ENST00000560962 M0R036 132 aa13.92□□□□□ -0.18
USP3-AS1-208ENST00000560962 PQLC2Q6ZP29 291 aa13.92□□□□□ -0.18
USP3-AS1-208ENST00000560962 IL17RELQ6ZVW7 336 aa13.92□□□□□ -0.18
USP3-AS1-208ENST00000560962 YTHDF2Q9Y5A9 579 aaKnown RBP13.92□□□□□ -0.18
USP3-AS1-208ENST00000560962 TRAV30A0A087WSZ9 112 aa13.91□□□□□ -0.18
USP3-AS1-208ENST00000560962 OR2T8A6NH00 312 aa13.91□□□□□ -0.18
USP3-AS1-208ENST00000560962 PLP1P60201 277 aa13.91□□□□□ -0.18
USP3-AS1-208ENST00000560962 C15orf32Q32M92 178 aa13.91□□□□□ -0.18
USP3-AS1-208ENST00000560962 NOL4LQ96MY1 436 aaPredicted RBP13.91□□□□□ -0.18
USP3-AS1-208ENST00000560962 TRBV9A0A0B4J1U6 114 aa13.9□□□□□ -0.18
USP3-AS1-208ENST00000560962 H3BQ15 152 aa13.9□□□□□ -0.18
USP3-AS1-208ENST00000560962 NUPL2O15504 423 aaKnown RBP13.9□□□□□ -0.18
USP3-AS1-208ENST00000560962 HOXA3O43365 443 aaPredicted RBP13.9□□□□□ -0.18
USP3-AS1-208ENST00000560962 FABP1P07148 127 aa13.9□□□□□ -0.18
USP3-AS1-208ENST00000560962 YAE1D1Q9NRH1 226 aa13.9□□□□□ -0.18
USP3-AS1-208ENST00000560962 TMEM167BQ9NRX6 74 aa13.9□□□□□ -0.18
USP3-AS1-208ENST00000560962 FAM74A7A6NL05 159 aa13.9□□□□□ -0.18
USP3-AS1-208ENST00000560962 TOMM40O96008 361 aa13.9□□□□□ -0.18
USP3-AS1-208ENST00000560962 PYYP10082 97 aa13.9□□□□□ -0.18
USP3-AS1-208ENST00000560962 ZNF674Q2M3X9 581 aa13.9□□□□□ -0.18
USP3-AS1-208ENST00000560962 FAM74A3Q4VXF1 159 aa13.9□□□□□ -0.18
USP3-AS1-208ENST00000560962 AWAT1Q58HT5 328 aa13.9□□□□□ -0.18
USP3-AS1-208ENST00000560962 OR51G1Q8NGK1 321 aa13.9□□□□□ -0.18
USP3-AS1-208ENST00000560962 VN1R17PQ8TDU5 208 aa13.9□□□□□ -0.18
USP3-AS1-208ENST00000560962 RPUSD4Q96CM3 377 aaKnown RBP13.9□□□□□ -0.18
USP3-AS1-208ENST00000560962 HIGD1AQ9Y241 93 aa13.9□□□□□ -0.18
USP3-AS1-208ENST00000560962 SRP14P37108 136 aaKnown RBP13.89□□□□□ -0.19
USP3-AS1-208ENST00000560962 AKR1C3P42330 323 aa13.89□□□□□ -0.19
USP3-AS1-208ENST00000560962 NECAP1Q8NC96 275 aa13.89□□□□□ -0.19
USP3-AS1-208ENST00000560962 PAXXQ9BUH6 204 aa13.89□□□□□ -0.19
USP3-AS1-208ENST00000560962 ZNF580Q9UK33 172 aa13.89□□□□□ -0.19
USP3-AS1-208ENST00000560962 TMEM250H0YL14 139 aa13.88□□□□□ -0.19
USP3-AS1-208ENST00000560962 DNASE2O00115 360 aaPredicted RBP13.88□□□□□ -0.19
USP3-AS1-208ENST00000560962 AP4M1O00189 453 aa13.88□□□□□ -0.19
USP3-AS1-208ENST00000560962 NPPCP23582 126 aa13.88□□□□□ -0.19
USP3-AS1-208ENST00000560962 YPEL3P61236 119 aaPredicted RBP13.88□□□□□ -0.19
USP3-AS1-208ENST00000560962 UBE2L3P68036 154 aaKnown RBP13.88□□□□□ -0.19
USP3-AS1-208ENST00000560962 LEMD1Q68G75 181 aa13.88□□□□□ -0.19
USP3-AS1-208ENST00000560962 TMEM88Q6PEY1 159 aa13.88□□□□□ -0.19
USP3-AS1-208ENST00000560962 SIGLECL1Q8N7X8 197 aa13.88□□□□□ -0.19
USP3-AS1-208ENST00000560962 ZNF502Q8TBZ5 544 aa13.88□□□□□ -0.19
USP3-AS1-208ENST00000560962 NIPSNAP3BQ9BS92 247 aa13.88□□□□□ -0.19
USP3-AS1-208ENST00000560962 OR51M1Q9H341 326 aa13.88□□□□□ -0.19
USP3-AS1-208ENST00000560962 ZNF727A8MUV8 499 aa13.87□□□□□ -0.19
USP3-AS1-208ENST00000560962 BRI3O95415 125 aa13.87□□□□□ -0.19
USP3-AS1-208ENST00000560962 SNRPCP09234 159 aaKnown RBP13.87□□□□□ -0.19
USP3-AS1-208ENST00000560962 FCGR2BP31994 310 aaPredicted RBP13.87□□□□□ -0.19
USP3-AS1-208ENST00000560962 ZNF491Q8N8L2 437 aa13.87□□□□□ -0.19
USP3-AS1-208ENST00000560962 TXN2Q99757 166 aa13.87□□□□□ -0.19
USP3-AS1-208ENST00000560962 CHRDL1Q9BU40 450 aa13.87□□□□□ -0.19
USP3-AS1-208ENST00000560962 RPS10P5Q9NQ39 176 aa13.87□□□□□ -0.19
USP3-AS1-208ENST00000560962 C7orf77A4D0Y5 90 aa13.87□□□□□ -0.19
USP3-AS1-208ENST00000560962 PDE6DO43924 150 aa13.87□□□□□ -0.19
USP3-AS1-208ENST00000560962 IL4P05112 153 aa13.87□□□□□ -0.19
USP3-AS1-208ENST00000560962 CTSGP08311 255 aa13.87□□□□□ -0.19
USP3-AS1-208ENST00000560962 HNF1AP20823 631 aa13.87□□□□□ -0.19
USP3-AS1-208ENST00000560962 PPIFP30405 207 aaKnown RBP13.87□□□□□ -0.19
USP3-AS1-208ENST00000560962 GPR183P32249 361 aa13.87□□□□□ -0.19
USP3-AS1-208ENST00000560962 CBLN2Q8IUK8 224 aa13.87□□□□□ -0.19
USP3-AS1-208ENST00000560962 TMEM86BQ8N661 226 aa13.87□□□□□ -0.19
USP3-AS1-208ENST00000560962 Q8WTZ3 238 aa13.87□□□□□ -0.19
USP3-AS1-208ENST00000560962 SMIM7Q9BQ49 75 aa13.87□□□□□ -0.19
USP3-AS1-208ENST00000560962 PARLQ9H300 379 aa13.87□□□□□ -0.19
USP3-AS1-208ENST00000560962 TMEM160Q9NX00 188 aa13.87□□□□□ -0.19
USP3-AS1-208ENST00000560962 MRPL27Q9P0M9 148 aaKnown RBP13.87□□□□□ -0.19
USP3-AS1-208ENST00000560962 MXRA5Q9NR99 2828 aa13.87□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 51.3 ms