RNA–Protein interactions for RNA: ENST00000559373.1

TSPAN3-206, Transcript of tetraspanin 3, humanhuman

TSL 3

Gene TSPAN3, Length 393 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3-206ENST00000559373 TNFSF8P32971 234 aa14.81□□□□□ -0.04
TSPAN3-206ENST00000559373 FXYD7P58549 80 aa14.81□□□□□ -0.04
TSPAN3-206ENST00000559373 ZNF90Q03938 601 aa14.81□□□□□ -0.04
TSPAN3-206ENST00000559373 SMCO1Q147U7 214 aa14.81□□□□□ -0.04
TSPAN3-206ENST00000559373 LGI3Q8N145 548 aa14.81□□□□□ -0.04
TSPAN3-206ENST00000559373 SCP2D1Q9UJQ7 156 aa14.81□□□□□ -0.04
TSPAN3-206ENST00000559373 CCR6P51684 374 aa14.8□□□□□ -0.04
TSPAN3-206ENST00000559373 AP2S1P53680 142 aaPredicted RBP14.8□□□□□ -0.04
TSPAN3-206ENST00000559373 GDF5OSQ5U4N7 250 aa14.8□□□□□ -0.04
TSPAN3-206ENST00000559373 OR1S1Q8NH92 325 aa14.8□□□□□ -0.04
TSPAN3-206ENST00000559373 RAB2BQ8WUD1 216 aa14.8□□□□□ -0.04
TSPAN3-206ENST00000559373 IL22RA2Q969J5 263 aa14.8□□□□□ -0.04
TSPAN3-206ENST00000559373 SCRT1Q9BWW7 348 aa14.8□□□□□ -0.04
TSPAN3-206ENST00000559373 SLIRPQ9GZT3 109 aaKnown RBP14.8□□□□□ -0.04
TSPAN3-206ENST00000559373 NRN1Q9NPD7 142 aa14.8□□□□□ -0.04
TSPAN3-206ENST00000559373 HSPB7Q9UBY9 170 aa14.8□□□□□ -0.04
TSPAN3-206ENST00000559373 FABP12A6NFH5 140 aa14.79□□□□□ -0.04
TSPAN3-206ENST00000559373 KLF9Q13886 244 aaPredicted RBP14.79□□□□□ -0.04
TSPAN3-206ENST00000559373 TMED4Q7Z7H5 227 aa14.79□□□□□ -0.04
TSPAN3-206ENST00000559373 RNF125Q96EQ8 232 aa14.79□□□□□ -0.04
TSPAN3-206ENST00000559373 WDR12Q9GZL7 423 aaKnown RBP14.79□□□□□ -0.04
TSPAN3-206ENST00000559373 IGKV1D-37A0A075B6S9 117 aa14.78□□□□□ -0.04
TSPAN3-206ENST00000559373 A0A0B4J2A0 478 aa14.78□□□□□ -0.04
TSPAN3-206ENST00000559373 ZFP92A6NM28 416 aa14.78□□□□□ -0.04
TSPAN3-206ENST00000559373 H3BMM0 161 aa14.78□□□□□ -0.04
TSPAN3-206ENST00000559373 IAPPP10997 89 aa14.78□□□□□ -0.04
TSPAN3-206ENST00000559373 SNRPD3P62318 126 aaKnown RBP14.78□□□□□ -0.04
TSPAN3-206ENST00000559373 OR2F1Q13607 317 aa14.78□□□□□ -0.04
TSPAN3-206ENST00000559373 GAMTQ14353 236 aa14.78□□□□□ -0.04
TSPAN3-206ENST00000559373 TMEM41BQ5BJD5 291 aa14.78□□□□□ -0.04
TSPAN3-206ENST00000559373 NOXA1Q86UR1 476 aa14.78□□□□□ -0.04
TSPAN3-206ENST00000559373 LINC00052Q96N35 136 aa14.78□□□□□ -0.04
TSPAN3-206ENST00000559373 HRH4Q9H3N8 390 aa14.78□□□□□ -0.04
TSPAN3-206ENST00000559373 RSL24D1Q9UHA3 163 aaKnown RBP14.78□□□□□ -0.04
TSPAN3-206ENST00000559373 SHPKQ9UHJ6 478 aa14.78□□□□□ -0.04
TSPAN3-206ENST00000559373 PAIP2BQ9ULR5 123 aaKnown RBP14.78□□□□□ -0.04
TSPAN3-206ENST00000559373 U3KQ87 197 aa14.78□□□□□ -0.04
TSPAN3-206ENST00000559373 C11orf94C9JXX5 98 aa14.77□□□□□ -0.05
TSPAN3-206ENST00000559373 H3BMQ9 156 aa14.77□□□□□ -0.05
TSPAN3-206ENST00000559373 TMBIM6P55061 237 aa14.77□□□□□ -0.05
TSPAN3-206ENST00000559373 SCGB3A2Q96PL1 93 aa14.77□□□□□ -0.05
TSPAN3-206ENST00000559373 SOSTQ9BQB4 213 aa14.77□□□□□ -0.05
TSPAN3-206ENST00000559373 IGHV4-4A0A075B6R2 117 aa14.76□□□□□ -0.05
TSPAN3-206ENST00000559373 IGHV3OR16-12A0A075B7B8 117 aa14.76□□□□□ -0.05
TSPAN3-206ENST00000559373 TRAV10A0A0B4J240 114 aa14.76□□□□□ -0.05
TSPAN3-206ENST00000559373 LYZP61626 148 aa14.76□□□□□ -0.05
TSPAN3-206ENST00000559373 C12orf74Q32Q52 190 aa14.76□□□□□ -0.05
TSPAN3-206ENST00000559373 MCFD2Q8NI22 146 aa14.76□□□□□ -0.05
TSPAN3-206ENST00000559373 CENPSQ8N2Z9 138 aa14.75□□□□□ -0.05
TSPAN3-206ENST00000559373 SLC35E1Q96K37 410 aa14.75□□□□□ -0.05
TSPAN3-206ENST00000559373 RABL2AQ9UBK7 228 aaPredicted RBP14.75□□□□□ -0.05
TSPAN3-206ENST00000559373 RABL2BQ9UNT1 228 aa14.75□□□□□ -0.05
TSPAN3-206ENST00000559373 ANXA3P12429 323 aa14.74□□□□□ -0.05
TSPAN3-206ENST00000559373 EMP1P54849 157 aa14.74□□□□□ -0.05
TSPAN3-206ENST00000559373 PYDC2Q56P42 97 aa14.74□□□□□ -0.05
TSPAN3-206ENST00000559373 MAGT1Q9H0U3 335 aa14.74□□□□□ -0.05
TSPAN3-206ENST00000559373 DEFB131BA0A096LNP1 70 aa14.73□□□□□ -0.05
TSPAN3-206ENST00000559373 F6UB75 175 aa14.73□□□□□ -0.05
TSPAN3-206ENST00000559373 NOL3O60936 208 aaKnown RBP14.73□□□□□ -0.05
TSPAN3-206ENST00000559373 HLA-DRB4P13762 266 aa14.73□□□□□ -0.05
TSPAN3-206ENST00000559373 VAMP1P23763 118 aa14.73□□□□□ -0.05
TSPAN3-206ENST00000559373 OR4B1Q8NGF8 309 aa14.73□□□□□ -0.05
TSPAN3-206ENST00000559373 PPP1R14BQ96C90 147 aa14.73□□□□□ -0.05
TSPAN3-206ENST00000559373 KRTAP17-1Q9BYP8 105 aa14.73□□□□□ -0.05
TSPAN3-206ENST00000559373 HLA-DRB4X5D2U9 266 aa14.73□□□□□ -0.05
TSPAN3-206ENST00000559373 DNAH6Q9C0G6 4158 aa14.73□□□□□ -0.05
TSPAN3-206ENST00000559373 IGKV1OR2-108A0A075B7D4 117 aa14.72□□□□□ -0.05
TSPAN3-206ENST00000559373 GPX4P36969 197 aaPredicted RBP14.72□□□□□ -0.05
TSPAN3-206ENST00000559373 TCTAP57738 103 aa14.72□□□□□ -0.05
TSPAN3-206ENST00000559373 NUTF2P61970 127 aaKnown RBP14.72□□□□□ -0.05
TSPAN3-206ENST00000559373 TRIM63Q969Q1 353 aa14.72□□□□□ -0.05
TSPAN3-206ENST00000559373 C1QTNF4Q9BXJ3 329 aa14.72□□□□□ -0.05
TSPAN3-206ENST00000559373 PLA2G2EQ9NZK7 142 aa14.72□□□□□ -0.05
TSPAN3-206ENST00000559373 CACFD1Q9UGQ2 172 aa14.72□□□□□ -0.05
TSPAN3-206ENST00000559373 PITX3O75364 302 aa14.71□□□□□ -0.05
TSPAN3-206ENST00000559373 NKX2-1P43699 371 aaPredicted RBP14.71□□□□□ -0.05
TSPAN3-206ENST00000559373 TOMM5Q8N4H5 51 aa14.71□□□□□ -0.05
TSPAN3-206ENST00000559373 BCL7BQ9BQE9 202 aa14.71□□□□□ -0.05
TSPAN3-206ENST00000559373 SLC35B3Q9H1N7 401 aa14.71□□□□□ -0.05
TSPAN3-206ENST00000559373 SAV1Q9H4B6 383 aaPredicted RBP14.71□□□□□ -0.05
TSPAN3-206ENST00000559373 WRBO00258 174 aa14.7□□□□□ -0.06
TSPAN3-206ENST00000559373 HOXB5P09067 269 aa14.7□□□□□ -0.06
TSPAN3-206ENST00000559373 GATA2P23769 480 aaPredicted RBP14.7□□□□□ -0.06
TSPAN3-206ENST00000559373 SRPXP78539 464 aa14.7□□□□□ -0.06
TSPAN3-206ENST00000559373 TMEM128Q5BJH2 165 aa14.7□□□□□ -0.06
TSPAN3-206ENST00000559373 COQ8AQ8NI60 647 aa14.7□□□□□ -0.06
TSPAN3-206ENST00000559373 SEPSECSQ9HD40 501 aaKnown RBP14.7□□□□□ -0.06
TSPAN3-206ENST00000559373 NACAE9PAV3 2078 aa14.7□□□□□ -0.06
TSPAN3-206ENST00000559373 SNRPGP15A8MWD9 76 aa14.69□□□□□ -0.06
TSPAN3-206ENST00000559373 FAUP35544 74 aaKnown RBP14.69□□□□□ -0.06
TSPAN3-206ENST00000559373 ZNF79Q15937 498 aa14.69□□□□□ -0.06
TSPAN3-206ENST00000559373 OR8G2PQ6IF36 304 aa14.69□□□□□ -0.06
TSPAN3-206ENST00000559373 OR8I2Q8N0Y5 310 aa14.69□□□□□ -0.06
TSPAN3-206ENST00000559373 C20orf173Q96LM9 149 aa14.69□□□□□ -0.06
TSPAN3-206ENST00000559373 V9GYH0 126 aa14.69□□□□□ -0.06
TSPAN3-206ENST00000559373 H3BP45 60 aa14.68□□□□□ -0.06
TSPAN3-206ENST00000559373 SOCS3O14543 225 aa14.68□□□□□ -0.06
TSPAN3-206ENST00000559373 ID1P41134 155 aa14.68□□□□□ -0.06
TSPAN3-206ENST00000559373 RAB11AP62491 216 aa14.68□□□□□ -0.06
TSPAN3-206ENST00000559373 PPP1R1AQ13522 171 aa14.68□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms