RNA–Protein interactions for RNA: ENST00000558059.5

SNRPA1-206, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 2

Gene SNRPA1, Length 678 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-206ENST00000558059 LINC00854A0A1B0GVQ3 168 aa6.46□□□□□ -1.38
SNRPA1-206ENST00000558059 C9orf170A2RU37 121 aa6.46□□□□□ -1.38
SNRPA1-206ENST00000558059 FAM90A26D6RGX4 464 aa6.46□□□□□ -1.38
SNRPA1-206ENST00000558059 K7EQG2 157 aa6.46□□□□□ -1.38
SNRPA1-206ENST00000558059 SPRY2O43597 315 aa6.46□□□□□ -1.38
SNRPA1-206ENST00000558059 NDUFB6O95139 128 aa6.46□□□□□ -1.38
SNRPA1-206ENST00000558059 IFNA4P05014 189 aa6.46□□□□□ -1.38
SNRPA1-206ENST00000558059 HNRNPCP07910 306 aaKnown RBP eCLIP6.46□□□□□ -1.38
SNRPA1-206ENST00000558059 HOXB5P09067 269 aa6.46□□□□□ -1.38
SNRPA1-206ENST00000558059 BTCP35070 178 aa6.46□□□□□ -1.38
SNRPA1-206ENST00000558059 GPX4P36969 197 aaPredicted RBP6.46□□□□□ -1.38
SNRPA1-206ENST00000558059 RPL11P62913 178 aaKnown RBP6.46□□□□□ -1.38
SNRPA1-206ENST00000558059 GAMTQ14353 236 aa6.46□□□□□ -1.38
SNRPA1-206ENST00000558059 USF2Q15853 346 aaPredicted RBP6.46□□□□□ -1.38
SNRPA1-206ENST00000558059 DEFB135Q30KP9 77 aa6.46□□□□□ -1.38
SNRPA1-206ENST00000558059 TRIQKQ629K1 86 aa6.46□□□□□ -1.38
SNRPA1-206ENST00000558059 C16orf54Q6UWD8 224 aa6.46□□□□□ -1.38
SNRPA1-206ENST00000558059 STPG3Q8N7X2 389 aa6.46□□□□□ -1.38
SNRPA1-206ENST00000558059 GLMPQ8WWB7 406 aa6.46□□□□□ -1.38
SNRPA1-206ENST00000558059 RNF183Q96D59 192 aa6.46□□□□□ -1.38
SNRPA1-206ENST00000558059 CSTL1Q9H114 145 aa6.46□□□□□ -1.38
SNRPA1-206ENST00000558059 NDUFA13Q9P0J0 144 aa6.46□□□□□ -1.38
SNRPA1-206ENST00000558059 HYDINQ4G0P3 5121 aa6.46□□□□□ -1.38
SNRPA1-206ENST00000558059 LCE6AA0A183 80 aa6.45□□□□□ -1.38
SNRPA1-206ENST00000558059 MED6O75586 246 aa6.45□□□□□ -1.38
SNRPA1-206ENST00000558059 TOMM40O96008 361 aa6.45□□□□□ -1.38
SNRPA1-206ENST00000558059 IL4P05112 153 aa6.45□□□□□ -1.38
SNRPA1-206ENST00000558059 RD3LP0DJH9 198 aa6.45□□□□□ -1.38
SNRPA1-206ENST00000558059 IAPPP10997 89 aa6.45□□□□□ -1.38
SNRPA1-206ENST00000558059 PSG1P11464 419 aa6.45□□□□□ -1.38
SNRPA1-206ENST00000558059 IL7P13232 177 aa6.45□□□□□ -1.38
SNRPA1-206ENST00000558059 INPP1P49441 399 aa6.45□□□□□ -1.38
SNRPA1-206ENST00000558059 DEFB131AP59861 70 aa6.45□□□□□ -1.38
SNRPA1-206ENST00000558059 EWSR1Q01844 656 aaKnown RBP eCLIP6.45□□□□□ -1.38
SNRPA1-206ENST00000558059 GGNBP1Q5YKI7 109 aa6.45□□□□□ -1.38
SNRPA1-206ENST00000558059 LEMD1Q68G75 181 aa6.45□□□□□ -1.38
SNRPA1-206ENST00000558059 STXBP6Q8NFX7 210 aa6.45□□□□□ -1.38
SNRPA1-206ENST00000558059 IL17DQ8TAD2 202 aa6.45□□□□□ -1.38
SNRPA1-206ENST00000558059 DCANP1Q8TF63 244 aa6.45□□□□□ -1.38
SNRPA1-206ENST00000558059 NARS2Q96I59 477 aaKnown RBP6.45□□□□□ -1.38
SNRPA1-206ENST00000558059 MAGT1Q9H0U3 335 aa6.45□□□□□ -1.38
SNRPA1-206ENST00000558059 RABAC1Q9UI14 185 aa6.45□□□□□ -1.38
SNRPA1-206ENST00000558059 A0A0J9YWU9 116 aa6.44□□□□□ -1.38
SNRPA1-206ENST00000558059 MPTX1A8MV57 137 aa6.44□□□□□ -1.38
SNRPA1-206ENST00000558059 PRSS46E5RG02 174 aa6.44□□□□□ -1.38
SNRPA1-206ENST00000558059 PLA2G10O15496 165 aa6.44□□□□□ -1.38
SNRPA1-206ENST00000558059 BUB3O43684 328 aa6.44□□□□□ -1.38
SNRPA1-206ENST00000558059 SYNGR2O43760 224 aa6.44□□□□□ -1.38
SNRPA1-206ENST00000558059 ADAP1O75689 374 aa6.44□□□□□ -1.38
SNRPA1-206ENST00000558059 OR4E1P0C645 316 aa6.44□□□□□ -1.38
SNRPA1-206ENST00000558059 ZNF90Q03938 601 aa6.44□□□□□ -1.38
SNRPA1-206ENST00000558059 DHRS2Q13268 280 aa6.44□□□□□ -1.38
SNRPA1-206ENST00000558059 LYG2Q86SG7 212 aa6.44□□□□□ -1.38
SNRPA1-206ENST00000558059 OR51G1Q8NGK1 321 aa6.44□□□□□ -1.38
SNRPA1-206ENST00000558059 RNF125Q96EQ8 232 aa6.44□□□□□ -1.38
SNRPA1-206ENST00000558059 GRAMD2BQ96HH9 432 aa6.44□□□□□ -1.38
SNRPA1-206ENST00000558059 C7orf50Q9BRJ6 194 aaKnown RBP6.44□□□□□ -1.38
SNRPA1-206ENST00000558059 IGKV1OR2-108A0A075B7D4 117 aa6.43□□□□□ -1.38
SNRPA1-206ENST00000558059 HELTA6NFD8 242 aa6.43□□□□□ -1.38
SNRPA1-206ENST00000558059 ZFP92A6NM28 416 aa6.43□□□□□ -1.38
SNRPA1-206ENST00000558059 CENPXA8MT69 81 aa6.43□□□□□ -1.38
SNRPA1-206ENST00000558059 WRBO00258 174 aa6.43□□□□□ -1.38
SNRPA1-206ENST00000558059 ZNF688P0C7X2 276 aa6.43□□□□□ -1.38
SNRPA1-206ENST00000558059 ANXA7P20073 488 aaKnown RBP6.43□□□□□ -1.38
SNRPA1-206ENST00000558059 RAB11AP62491 216 aa6.43□□□□□ -1.38
SNRPA1-206ENST00000558059 ID3Q02535 119 aa6.43□□□□□ -1.38
SNRPA1-206ENST00000558059 THAP8Q8NA92 274 aa6.43□□□□□ -1.38
SNRPA1-206ENST00000558059 SLC35E1Q96K37 410 aa6.43□□□□□ -1.38
SNRPA1-206ENST00000558059 CIB3Q96Q77 187 aaPredicted RBP6.43□□□□□ -1.38
SNRPA1-206ENST00000558059 KNCNA6PVL3 124 aa6.42□□□□□ -1.38
SNRPA1-206ENST00000558059 GIG44P09565 113 aaPredicted RBP6.42□□□□□ -1.38
SNRPA1-206ENST00000558059 ATF4P18848 351 aaPredicted RBP6.42□□□□□ -1.38
SNRPA1-206ENST00000558059 EIF2B2P49770 351 aaKnown RBP6.42□□□□□ -1.38
SNRPA1-206ENST00000558059 AP2S1P53680 142 aaPredicted RBP6.42□□□□□ -1.38
SNRPA1-206ENST00000558059 POLR2GP62487 172 aaKnown RBP eCLIP6.42□□□□□ -1.38
SNRPA1-206ENST00000558059 RPP30P78346 268 aaKnown RBP6.42□□□□□ -1.38
SNRPA1-206ENST00000558059 OR2F1Q13607 317 aa6.42□□□□□ -1.38
SNRPA1-206ENST00000558059 SPANXN5Q5MJ07 72 aa6.42□□□□□ -1.38
SNRPA1-206ENST00000558059 OR8G2PQ6IF36 304 aa6.42□□□□□ -1.38
SNRPA1-206ENST00000558059 TRPT1Q86TN4 253 aaKnown RBP6.42□□□□□ -1.38
SNRPA1-206ENST00000558059 STHQ8IWL8 128 aa6.42□□□□□ -1.38
SNRPA1-206ENST00000558059 OR4D5Q8NGN0 318 aa6.42□□□□□ -1.38
SNRPA1-206ENST00000558059 COQ8AQ8NI60 647 aa6.42□□□□□ -1.38
SNRPA1-206ENST00000558059 GATAD1Q8WUU5 269 aa6.42□□□□□ -1.38
SNRPA1-206ENST00000558059 TRGV9Q99603 122 aa6.42□□□□□ -1.38
SNRPA1-206ENST00000558059 PAIP2BQ9ULR5 123 aaKnown RBP6.42□□□□□ -1.38
SNRPA1-206ENST00000558059 KMT2AQ03164 3969 aa6.42□□□□□ -1.38
SNRPA1-206ENST00000558059 PMS2P5A8MQ11 134 aa6.41□□□□□ -1.38
SNRPA1-206ENST00000558059 SNRPGP15A8MWD9 76 aa6.41□□□□□ -1.38
SNRPA1-206ENST00000558059 H3BP45 60 aa6.41□□□□□ -1.38
SNRPA1-206ENST00000558059 LYRM1O43325 122 aa6.41□□□□□ -1.38
SNRPA1-206ENST00000558059 CA1P00915 261 aaPredicted RBP6.41□□□□□ -1.38
SNRPA1-206ENST00000558059 IFNA21P01568 189 aa6.41□□□□□ -1.38
SNRPA1-206ENST00000558059 NKX2-1P43699 371 aaPredicted RBP6.41□□□□□ -1.38
SNRPA1-206ENST00000558059 PAX9P55771 341 aa6.41□□□□□ -1.38
SNRPA1-206ENST00000558059 CNPY1Q3B7I2 92 aa6.41□□□□□ -1.38
SNRPA1-206ENST00000558059 C4orf46Q504U0 113 aa6.41□□□□□ -1.38
SNRPA1-206ENST00000558059 SIGLEC15Q6ZMC9 328 aa6.41□□□□□ -1.38
SNRPA1-206ENST00000558059 OR11H2Q8NH07 326 aa6.41□□□□□ -1.38
SNRPA1-206ENST00000558059 MITD1Q8WV92 249 aa6.41□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 155.7 ms