RNA–Protein interactions for RNA: ENST00000557978.6

PBX4-202, Transcript of PBX homeobox 4, humanhuman

TSL 1 (best)

Gene PBX4, Length 1,416 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBX4-202ENST00000557978 STX12Q86Y82 276 aa12.62□□□□□ -0.39
PBX4-202ENST00000557978 TMEM61Q8N0U2 210 aa12.62□□□□□ -0.39
PBX4-202ENST00000557978 IGKV1OR2-108A0A075B7D4 117 aa12.62□□□□□ -0.39
PBX4-202ENST00000557978 ZNF785A8K8V0 405 aa12.62□□□□□ -0.39
PBX4-202ENST00000557978 CCNKO75909 580 aa12.62□□□□□ -0.39
PBX4-202ENST00000557978 CRYBB3P26998 211 aa12.62□□□□□ -0.39
PBX4-202ENST00000557978 SULT1A1P50225 295 aa12.62□□□□□ -0.39
PBX4-202ENST00000557978 RRAS2P62070 204 aaPredicted RBP12.62□□□□□ -0.39
PBX4-202ENST00000557978 ZNF90Q03938 601 aa12.62□□□□□ -0.39
PBX4-202ENST00000557978 GUCA2BQ16661 112 aa12.62□□□□□ -0.39
PBX4-202ENST00000557978 PPP1R1CQ8WVI7 109 aa12.62□□□□□ -0.39
PBX4-202ENST00000557978 RNF125Q96EQ8 232 aa12.62□□□□□ -0.39
PBX4-202ENST00000557978 WDR89Q96FK6 387 aaPredicted RBP12.62□□□□□ -0.39
PBX4-202ENST00000557978 IGHV3-49A0A0A0MS15 119 aa12.61□□□□□ -0.39
PBX4-202ENST00000557978 TSPAN4O14817 238 aa12.61□□□□□ -0.39
PBX4-202ENST00000557978 HBG1P69891 147 aa12.61□□□□□ -0.39
PBX4-202ENST00000557978 HBG2P69892 147 aa12.61□□□□□ -0.39
PBX4-202ENST00000557978 TMEM252Q8N6L7 170 aa12.61□□□□□ -0.39
PBX4-202ENST00000557978 SLC25A31Q9H0C2 315 aa12.61□□□□□ -0.39
PBX4-202ENST00000557978 VSIRQ9H7M9 311 aa12.61□□□□□ -0.39
PBX4-202ENST00000557978 PFDN2Q9UHV9 154 aa12.61□□□□□ -0.39
PBX4-202ENST00000557978 RABAC1Q9UI14 185 aa12.61□□□□□ -0.39
PBX4-202ENST00000557978 LSM4Q9Y4Z0 139 aaKnown RBP12.61□□□□□ -0.39
PBX4-202ENST00000557978 SELENOKQ9Y6D0 94 aa12.61□□□□□ -0.39
PBX4-202ENST00000557978 SMAD5-AS1Q9Y6J3 95 aa12.61□□□□□ -0.39
PBX4-202ENST00000557978 IGHV3OR16-13A0A075B7E8 117 aa12.6□□□□□ -0.39
PBX4-202ENST00000557978 IGHV3-74A0A0B4J1X5 117 aa12.6□□□□□ -0.39
PBX4-202ENST00000557978 CST7O76096 145 aa12.6□□□□□ -0.39
PBX4-202ENST00000557978 MPC2O95563 127 aa12.6□□□□□ -0.39
PBX4-202ENST00000557978 HNRNPCP07910 306 aaKnown RBP eCLIP12.6□□□□□ -0.39
PBX4-202ENST00000557978 S100A11P31949 105 aa12.6□□□□□ -0.39
PBX4-202ENST00000557978 P2RY1P47900 373 aa12.6□□□□□ -0.39
PBX4-202ENST00000557978 SLC38A11Q08AI6 406 aa12.6□□□□□ -0.39
PBX4-202ENST00000557978 TEPPQ6URK8 271 aa12.6□□□□□ -0.39
PBX4-202ENST00000557978 BPIFCQ8NFQ6 507 aa12.6□□□□□ -0.39
PBX4-202ENST00000557978 ST8SIA2Q92186 375 aa12.6□□□□□ -0.39
PBX4-202ENST00000557978 GRAMD2BQ96HH9 432 aa12.6□□□□□ -0.39
PBX4-202ENST00000557978 RNF2Q99496 336 aa12.6□□□□□ -0.39
PBX4-202ENST00000557978 SPAG8Q99932 426 aaPredicted RBP12.6□□□□□ -0.39
PBX4-202ENST00000557978 CXCL3P19876 107 aa12.59□□□□□ -0.39
PBX4-202ENST00000557978 NUP62P37198 522 aaPredicted RBP12.59□□□□□ -0.39
PBX4-202ENST00000557978 ARL16Q0P5N6 197 aa12.59□□□□□ -0.39
PBX4-202ENST00000557978 USF2Q15853 346 aaPredicted RBP12.59□□□□□ -0.39
PBX4-202ENST00000557978 ATP6V1FQ16864 119 aa12.59□□□□□ -0.39
PBX4-202ENST00000557978 LILRB2Q8N423 598 aa12.59□□□□□ -0.39
PBX4-202ENST00000557978 OR5AC2Q9NZP5 309 aa12.59□□□□□ -0.39
PBX4-202ENST00000557978 APOHP02749 345 aaPredicted RBP12.58□□□□□ -0.4
PBX4-202ENST00000557978 SELENOTP62341 195 aa12.58□□□□□ -0.4
PBX4-202ENST00000557978 PAFAH1B2P68402 229 aa12.58□□□□□ -0.4
PBX4-202ENST00000557978 OR2F1Q13607 317 aa12.58□□□□□ -0.4
PBX4-202ENST00000557978 FCN2Q15485 313 aa12.58□□□□□ -0.4
PBX4-202ENST00000557978 Q8N1Y9 231 aa12.58□□□□□ -0.4
PBX4-202ENST00000557978 TMEM217Q8N7C4 229 aa12.58□□□□□ -0.4
PBX4-202ENST00000557978 ASB13Q8WXK3 278 aa12.58□□□□□ -0.4
PBX4-202ENST00000557978 PBDC1Q9BVG4 233 aa12.58□□□□□ -0.4
PBX4-202ENST00000557978 IGSF23A1L1A6 192 aa12.57□□□□□ -0.4
PBX4-202ENST00000557978 H0YIZ8 118 aa12.57□□□□□ -0.4
PBX4-202ENST00000557978 S100A7P31151 101 aa12.57□□□□□ -0.4
PBX4-202ENST00000557978 EIF2B2P49770 351 aaKnown RBP12.57□□□□□ -0.4
PBX4-202ENST00000557978 CD81P60033 236 aa12.57□□□□□ -0.4
PBX4-202ENST00000557978 LYZP61626 148 aa12.57□□□□□ -0.4
PBX4-202ENST00000557978 BAXQ07812 192 aa12.57□□□□□ -0.4
PBX4-202ENST00000557978 CYP2G1PQ6ZSU1 146 aa12.57□□□□□ -0.4
PBX4-202ENST00000557978 TCF24Q7RTU0 167 aa12.57□□□□□ -0.4
PBX4-202ENST00000557978 OR11H7Q8NGC8 314 aa12.57□□□□□ -0.4
PBX4-202ENST00000557978 NEURL2Q9BR09 285 aa12.57□□□□□ -0.4
PBX4-202ENST00000557978 U3KQE9 123 aa12.57□□□□□ -0.4
PBX4-202ENST00000557978 IGHV3-66A0A0C4DH42 116 aa12.56□□□□□ -0.4
PBX4-202ENST00000557978 OR4C46A6NHA9 309 aa12.56□□□□□ -0.4
PBX4-202ENST00000557978 DFFBO76075 338 aa12.56□□□□□ -0.4
PBX4-202ENST00000557978 AP2S1P53680 142 aaPredicted RBP12.56□□□□□ -0.4
PBX4-202ENST00000557978 RAB31Q13636 194 aa12.56□□□□□ -0.4
PBX4-202ENST00000557978 FAM90A2PQ658T7 463 aa12.56□□□□□ -0.4
PBX4-202ENST00000557978 THAP6Q8TBB0 222 aa12.56□□□□□ -0.4
PBX4-202ENST00000557978 RNF126Q9BV68 326 aa12.56□□□□□ -0.4
PBX4-202ENST00000557978 UQCC1Q9NVA1 299 aa12.56□□□□□ -0.4
PBX4-202ENST00000557978 HELTA6NFD8 242 aa12.55□□□□□ -0.4
PBX4-202ENST00000557978 CD7P09564 240 aa12.55□□□□□ -0.4
PBX4-202ENST00000557978 RPL11P62913 178 aaKnown RBP12.55□□□□□ -0.4
PBX4-202ENST00000557978 EWSR1Q01844 656 aaKnown RBP eCLIP12.55□□□□□ -0.4
PBX4-202ENST00000557978 FGL1Q08830 312 aa12.55□□□□□ -0.4
PBX4-202ENST00000557978 TMEM147Q9BVK8 224 aa12.55□□□□□ -0.4
PBX4-202ENST00000557978 SLC45A2Q9UMX9 530 aa12.55□□□□□ -0.4
PBX4-202ENST00000557978 COL7A1Q02388 2944 aa12.55□□□□□ -0.4
PBX4-202ENST00000557978 BUB3O43684 328 aa12.54□□□□□ -0.4
PBX4-202ENST00000557978 GIPP09681 153 aaPredicted RBP12.54□□□□□ -0.4
PBX4-202ENST00000557978 GATA2P23769 480 aaPredicted RBP12.54□□□□□ -0.4
PBX4-202ENST00000557978 NHLH2Q02577 135 aa12.54□□□□□ -0.4
PBX4-202ENST00000557978 VWC2Q2TAL6 325 aa12.54□□□□□ -0.4
PBX4-202ENST00000557978 C16orf54Q6UWD8 224 aa12.54□□□□□ -0.4
PBX4-202ENST00000557978 PPP1R14BQ96C90 147 aa12.54□□□□□ -0.4
PBX4-202ENST00000557978 MBD2Q9UBB5 411 aa12.54□□□□□ -0.4
PBX4-202ENST00000557978 A8MZ25 164 aa12.54□□□□□ -0.4
PBX4-202ENST00000557978 OR11H12B2RN74 326 aa12.54□□□□□ -0.4
PBX4-202ENST00000557978 DNASE2O00115 360 aaPredicted RBP12.54□□□□□ -0.4
PBX4-202ENST00000557978 AGPAT2O15120 278 aa12.54□□□□□ -0.4
PBX4-202ENST00000557978 CMC4P56277 68 aaPredicted RBP12.54□□□□□ -0.4
PBX4-202ENST00000557978 TMEM182Q6ZP80 229 aaPredicted RBP12.54□□□□□ -0.4
PBX4-202ENST00000557978 S100A7AQ86SG5 101 aa12.54□□□□□ -0.4
PBX4-202ENST00000557978 ZNF546Q86UE3 836 aa12.54□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms