RNA–Protein interactions for RNA: ENST00000556768.5

SCFD1-222, Transcript of sec1 family domain containing 1, humanhuman

TSL 1 (best)

Gene SCFD1, Length 1,829 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-222ENST00000556768 A0A0G2JRQ6 117 aa5.44□□□□□ -1.54
SCFD1-222ENST00000556768 A0A1B0GU03 582 aa5.44□□□□□ -1.54
SCFD1-222ENST00000556768 DFFBO76075 338 aa5.44□□□□□ -1.54
SCFD1-222ENST00000556768 JTBO76095 146 aa5.44□□□□□ -1.54
SCFD1-222ENST00000556768 IFNA4P05014 189 aa5.44□□□□□ -1.54
SCFD1-222ENST00000556768 NPY1RP25929 384 aa5.44□□□□□ -1.54
SCFD1-222ENST00000556768 TNFRSF9Q07011 255 aa5.44□□□□□ -1.54
SCFD1-222ENST00000556768 TMEM187Q14656 261 aa5.44□□□□□ -1.54
SCFD1-222ENST00000556768 SMCO1Q147U7 214 aa5.44□□□□□ -1.54
SCFD1-222ENST00000556768 PVRIGQ6DKI7 326 aa5.44□□□□□ -1.54
SCFD1-222ENST00000556768 OR1S2Q8NGQ3 325 aa5.44□□□□□ -1.54
SCFD1-222ENST00000556768 OR1S1Q8NH92 325 aa5.44□□□□□ -1.54
SCFD1-222ENST00000556768 SOSTQ9BQB4 213 aa5.44□□□□□ -1.54
SCFD1-222ENST00000556768 CSTL1Q9H114 145 aa5.44□□□□□ -1.54
SCFD1-222ENST00000556768 RABAC1Q9UI14 185 aa5.44□□□□□ -1.54
SCFD1-222ENST00000556768 CSMD3Q7Z407 3707 aa5.44□□□□□ -1.54
SCFD1-222ENST00000556768 IGHV3-66A0A0C4DH42 116 aa5.44□□□□□ -1.54
SCFD1-222ENST00000556768 DUXBA0A1W2PPF3 345 aa5.44□□□□□ -1.54
SCFD1-222ENST00000556768 HELTA6NFD8 242 aa5.44□□□□□ -1.54
SCFD1-222ENST00000556768 MPTX1A8MV57 137 aa5.44□□□□□ -1.54
SCFD1-222ENST00000556768 ZNF701M0R085 212 aaPredicted RBP5.44□□□□□ -1.54
SCFD1-222ENST00000556768 FABP1P07148 127 aa5.44□□□□□ -1.54
SCFD1-222ENST00000556768 RD3LP0DJH9 198 aa5.44□□□□□ -1.54
SCFD1-222ENST00000556768 RPL35AP18077 110 aaKnown RBP5.44□□□□□ -1.54
SCFD1-222ENST00000556768 OR10J1P30954 320 aa5.44□□□□□ -1.54
SCFD1-222ENST00000556768 RAB11AP62491 216 aa5.44□□□□□ -1.54
SCFD1-222ENST00000556768 MLANAQ16655 118 aa5.44□□□□□ -1.54
SCFD1-222ENST00000556768 BSXQ3C1V8 233 aa5.44□□□□□ -1.54
SCFD1-222ENST00000556768 ODF3L2Q3SX64 289 aa5.44□□□□□ -1.54
SCFD1-222ENST00000556768 NMSQ5H8A3 153 aa5.44□□□□□ -1.54
SCFD1-222ENST00000556768 LYZL2Q7Z4W2 148 aa5.44□□□□□ -1.54
SCFD1-222ENST00000556768 APRG1Q8IVJ8 170 aa5.44□□□□□ -1.54
SCFD1-222ENST00000556768 LHFPL5Q8TAF8 219 aa5.44□□□□□ -1.54
SCFD1-222ENST00000556768 DTD1Q8TEA8 209 aa5.44□□□□□ -1.54
SCFD1-222ENST00000556768 OVOL2Q9BRP0 275 aa5.44□□□□□ -1.54
SCFD1-222ENST00000556768 MS4A6AQ9H2W1 248 aa5.44□□□□□ -1.54
SCFD1-222ENST00000556768 FNDC4Q9H6D8 234 aaPredicted RBP5.44□□□□□ -1.54
SCFD1-222ENST00000556768 VSIRQ9H7M9 311 aa5.44□□□□□ -1.54
SCFD1-222ENST00000556768 MAP6D1Q9H9H5 199 aa5.44□□□□□ -1.54
SCFD1-222ENST00000556768 TRAV2A0A0B4J234 112 aa5.43□□□□□ -1.54
SCFD1-222ENST00000556768 CENPXA8MT69 81 aa5.43□□□□□ -1.54
SCFD1-222ENST00000556768 MED6O75586 246 aa5.43□□□□□ -1.54
SCFD1-222ENST00000556768 NXPH3O95157 252 aa5.43□□□□□ -1.54
SCFD1-222ENST00000556768 CRYBB3P26998 211 aa5.43□□□□□ -1.54
SCFD1-222ENST00000556768 RND2P52198 227 aa5.43□□□□□ -1.54
SCFD1-222ENST00000556768 YPEL3P61236 119 aaPredicted RBP5.43□□□□□ -1.54
SCFD1-222ENST00000556768 KLF9Q13886 244 aaPredicted RBP5.43□□□□□ -1.54
SCFD1-222ENST00000556768 DEFB135Q30KP9 77 aa5.43□□□□□ -1.54
SCFD1-222ENST00000556768 TRIQKQ629K1 86 aa5.43□□□□□ -1.54
SCFD1-222ENST00000556768 PRSS54Q6PEW0 395 aa5.43□□□□□ -1.54
SCFD1-222ENST00000556768 STHQ8IWL8 128 aa5.43□□□□□ -1.54
SCFD1-222ENST00000556768 STXBP6Q8NFX7 210 aa5.43□□□□□ -1.54
SCFD1-222ENST00000556768 ACY3Q96HD9 319 aa5.43□□□□□ -1.54
SCFD1-222ENST00000556768 HSPB7Q9UBY9 170 aa5.43□□□□□ -1.54
SCFD1-222ENST00000556768 CXorf65A6NEN9 183 aa5.42□□□□□ -1.54
SCFD1-222ENST00000556768 F5H697 171 aa5.42□□□□□ -1.54
SCFD1-222ENST00000556768 IGKV1-17P01599 117 aa5.42□□□□□ -1.54
SCFD1-222ENST00000556768 NUP62P37198 522 aaPredicted RBP5.42□□□□□ -1.54
SCFD1-222ENST00000556768 P2RY1P47900 373 aa5.42□□□□□ -1.54
SCFD1-222ENST00000556768 PCP4P48539 62 aa5.42□□□□□ -1.54
SCFD1-222ENST00000556768 RBMS2Q15434 407 aaKnown RBP5.42□□□□□ -1.54
SCFD1-222ENST00000556768 TIGITQ495A1 244 aa5.42□□□□□ -1.54
SCFD1-222ENST00000556768 CENPSQ8N2Z9 138 aa5.42□□□□□ -1.54
SCFD1-222ENST00000556768 RNF183Q96D59 192 aa5.42□□□□□ -1.54
SCFD1-222ENST00000556768 CIB3Q96Q77 187 aaPredicted RBP5.42□□□□□ -1.54
SCFD1-222ENST00000556768 PAIP2BQ9ULR5 123 aaKnown RBP5.42□□□□□ -1.54
SCFD1-222ENST00000556768 TMED3Q9Y3Q3 217 aa5.42□□□□□ -1.54
SCFD1-222ENST00000556768 LCE6AA0A183 80 aa5.41□□□□□ -1.54
SCFD1-222ENST00000556768 NAP1L6A6NFF2 107 aa5.41□□□□□ -1.54
SCFD1-222ENST00000556768 ZFP92A6NM28 416 aa5.41□□□□□ -1.54
SCFD1-222ENST00000556768 SNRPGP15A8MWD9 76 aa5.41□□□□□ -1.54
SCFD1-222ENST00000556768 APOHP02749 345 aaPredicted RBP5.41□□□□□ -1.54
SCFD1-222ENST00000556768 IL4P05112 153 aa5.41□□□□□ -1.54
SCFD1-222ENST00000556768 HNRNPCP07910 306 aaKnown RBP eCLIP5.41□□□□□ -1.548e-7■□□□□ 9.9
SCFD1-222ENST00000556768 IGLC1P0CG04 106 aa5.41□□□□□ -1.54
SCFD1-222ENST00000556768 SLC25A6P12236 298 aa5.41□□□□□ -1.54
SCFD1-222ENST00000556768 GPX4P36969 197 aaPredicted RBP5.41□□□□□ -1.54
SCFD1-222ENST00000556768 DEFB131AP59861 70 aa5.41□□□□□ -1.54
SCFD1-222ENST00000556768 SNRPD3P62318 126 aaKnown RBP5.41□□□□□ -1.54
SCFD1-222ENST00000556768 SUPT4H1P63272 117 aaKnown RBP5.41□□□□□ -1.54
SCFD1-222ENST00000556768 LYG2Q86SG7 212 aa5.41□□□□□ -1.54
SCFD1-222ENST00000556768 OR51G1Q8NGK1 321 aa5.41□□□□□ -1.54
SCFD1-222ENST00000556768 GATAD1Q8WUU5 269 aa5.41□□□□□ -1.54
SCFD1-222ENST00000556768 ZNF414Q96IQ9 312 aa5.41□□□□□ -1.54
SCFD1-222ENST00000556768 SLC35E1Q96K37 410 aa5.41□□□□□ -1.54
SCFD1-222ENST00000556768 RARRES2Q99969 163 aa5.41□□□□□ -1.54
SCFD1-222ENST00000556768 KRTAP4-8Q9BYQ9 185 aa5.41□□□□□ -1.54
SCFD1-222ENST00000556768 RBKSQ9H477 322 aa5.41□□□□□ -1.54
SCFD1-222ENST00000556768 V9GYH0 126 aa5.41□□□□□ -1.54
SCFD1-222ENST00000556768 A0A0J9YWU9 116 aa5.41□□□□□ -1.54
SCFD1-222ENST00000556768 FAM90A26D6RGX4 464 aa5.41□□□□□ -1.54
SCFD1-222ENST00000556768 TRIAP1O43715 76 aa5.41□□□□□ -1.54
SCFD1-222ENST00000556768 CA1P00915 261 aaPredicted RBP5.41□□□□□ -1.54
SCFD1-222ENST00000556768 IFNA21P01568 189 aa5.41□□□□□ -1.54
SCFD1-222ENST00000556768 S100A7P31151 101 aa5.41□□□□□ -1.54
SCFD1-222ENST00000556768 UBE2MP61081 183 aaKnown RBP5.41□□□□□ -1.54
SCFD1-222ENST00000556768 NUTF2P61970 127 aaKnown RBP5.41□□□□□ -1.54
SCFD1-222ENST00000556768 NHLH2Q02577 135 aa5.41□□□□□ -1.54
SCFD1-222ENST00000556768 TMEM41BQ5BJD5 291 aa5.41□□□□□ -1.54
SCFD1-222ENST00000556768 LEMD1Q68G75 181 aa5.41□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms