RNA–Protein interactions for RNA: ENST00000555806.5

NEDD1-208, Transcript of neural precursor cell expressed, developmentally down-regulated 1, humanhuman

TSL 4

Gene NEDD1, Length 565 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD1-208ENST00000555806 JTBO76095 146 aa13.53□□□□□ -0.24
NEDD1-208ENST00000555806 CA1P00915 261 aaPredicted RBP13.53□□□□□ -0.24
NEDD1-208ENST00000555806 DHRS2Q13268 280 aa13.53□□□□□ -0.24
NEDD1-208ENST00000555806 GAMTQ14353 236 aa13.53□□□□□ -0.24
NEDD1-208ENST00000555806 SDHCQ99643 169 aaPredicted RBP13.53□□□□□ -0.24
NEDD1-208ENST00000555806 FLVCR2Q9UPI3 526 aa13.53□□□□□ -0.24
NEDD1-208ENST00000555806 LYSTQ99698 3801 aa13.52□□□□□ -0.24
NEDD1-208ENST00000555806 RYR2Q92736 4967 aa13.52□□□□□ -0.24
NEDD1-208ENST00000555806 C9orf170A2RU37 121 aa13.52□□□□□ -0.25
NEDD1-208ENST00000555806 CXorf65A6NEN9 183 aa13.52□□□□□ -0.25
NEDD1-208ENST00000555806 SYNGR2O43760 224 aa13.52□□□□□ -0.25
NEDD1-208ENST00000555806 AP2S1P53680 142 aaPredicted RBP13.52□□□□□ -0.25
NEDD1-208ENST00000555806 RPP30P78346 268 aaKnown RBP13.52□□□□□ -0.25
NEDD1-208ENST00000555806 DCANP1Q8TF63 244 aa13.52□□□□□ -0.25
NEDD1-208ENST00000555806 GATAD1Q8WUU5 269 aa13.52□□□□□ -0.25
NEDD1-208ENST00000555806 RNF125Q96EQ8 232 aa13.52□□□□□ -0.25
NEDD1-208ENST00000555806 NDUFA13Q9P0J0 144 aa13.52□□□□□ -0.25
NEDD1-208ENST00000555806 FABP1P07148 127 aa13.51□□□□□ -0.25
NEDD1-208ENST00000555806 EWSR1Q01844 656 aaKnown RBP eCLIP13.51□□□□□ -0.25
NEDD1-208ENST00000555806 ZNF90Q03938 601 aa13.51□□□□□ -0.25
NEDD1-208ENST00000555806 TMEM217Q8N7C4 229 aa13.51□□□□□ -0.25
NEDD1-208ENST00000555806 COQ8AQ8NI60 647 aa13.51□□□□□ -0.25
NEDD1-208ENST00000555806 RARRES2Q99969 163 aa13.51□□□□□ -0.25
NEDD1-208ENST00000555806 C7orf50Q9BRJ6 194 aaKnown RBP13.51□□□□□ -0.25
NEDD1-208ENST00000555806 IGKV1D-37A0A075B6S9 117 aa13.5□□□□□ -0.25
NEDD1-208ENST00000555806 KNCNA6PVL3 124 aa13.5□□□□□ -0.25
NEDD1-208ENST00000555806 BUB3O43684 328 aa13.5□□□□□ -0.25
NEDD1-208ENST00000555806 ADAP1O75689 374 aa13.5□□□□□ -0.25
NEDD1-208ENST00000555806 OR4E1P0C645 316 aa13.5□□□□□ -0.25
NEDD1-208ENST00000555806 IL7P13232 177 aa13.5□□□□□ -0.25
NEDD1-208ENST00000555806 NUP62P37198 522 aaPredicted RBP13.5□□□□□ -0.25
NEDD1-208ENST00000555806 LYZP61626 148 aa13.5□□□□□ -0.25
NEDD1-208ENST00000555806 C4orf46Q504U0 113 aa13.5□□□□□ -0.25
NEDD1-208ENST00000555806 PSMG4Q5JS54 123 aa13.5□□□□□ -0.25
NEDD1-208ENST00000555806 SIGLEC15Q6ZMC9 328 aa13.5□□□□□ -0.25
NEDD1-208ENST00000555806 PFDN2Q9UHV9 154 aa13.5□□□□□ -0.25
NEDD1-208ENST00000555806 H3BP45 60 aa13.49□□□□□ -0.25
NEDD1-208ENST00000555806 IFNA21P01568 189 aa13.49□□□□□ -0.25
NEDD1-208ENST00000555806 ANXA7P20073 488 aaKnown RBP13.49□□□□□ -0.25
NEDD1-208ENST00000555806 OR2F1Q13607 317 aa13.49□□□□□ -0.25
NEDD1-208ENST00000555806 SPANXN5Q5MJ07 72 aa13.49□□□□□ -0.25
NEDD1-208ENST00000555806 OR8G2PQ6IF36 304 aa13.49□□□□□ -0.25
NEDD1-208ENST00000555806 OR11H2Q8NH07 326 aa13.49□□□□□ -0.25
NEDD1-208ENST00000555806 BTCP35070 178 aa13.48□□□□□ -0.25
NEDD1-208ENST00000555806 ACTL10Q5JWF8 245 aa13.48□□□□□ -0.25
NEDD1-208ENST00000555806 TRPT1Q86TN4 253 aaKnown RBP13.48□□□□□ -0.25
NEDD1-208ENST00000555806 PPP1R14BQ96C90 147 aa13.48□□□□□ -0.25
NEDD1-208ENST00000555806 TRGV9Q99603 122 aa13.48□□□□□ -0.25
NEDD1-208ENST00000555806 NRN1Q9NPD7 142 aa13.48□□□□□ -0.25
NEDD1-208ENST00000555806 STRAPQ9Y3F4 350 aaKnown RBP13.48□□□□□ -0.25
NEDD1-208ENST00000555806 NUPR2A6NF83 97 aa13.47□□□□□ -0.25
NEDD1-208ENST00000555806 SNRPGP15A8MWD9 76 aa13.47□□□□□ -0.25
NEDD1-208ENST00000555806 ATF4P18848 351 aaPredicted RBP13.47□□□□□ -0.25
NEDD1-208ENST00000555806 SNRPD3P62318 126 aaKnown RBP13.47□□□□□ -0.25
NEDD1-208ENST00000555806 POLR2GP62487 172 aaKnown RBP eCLIP13.47□□□□□ -0.25
NEDD1-208ENST00000555806 SPP1P10451 314 aa13.46□□□□□ -0.25
NEDD1-208ENST00000555806 NKX2-1P43699 371 aaPredicted RBP13.46□□□□□ -0.25
NEDD1-208ENST00000555806 AKR1C1Q04828 323 aa13.46□□□□□ -0.25
NEDD1-208ENST00000555806 MORN3Q6PF18 240 aaPredicted RBP13.46□□□□□ -0.25
NEDD1-208ENST00000555806 THAP8Q8NA92 274 aa13.46□□□□□ -0.25
NEDD1-208ENST00000555806 IGKV1OR2-108A0A075B7D4 117 aa13.45□□□□□ -0.26
NEDD1-208ENST00000555806 PRSS46E5RG02 174 aa13.45□□□□□ -0.26
NEDD1-208ENST00000555806 SSSCA1O60232 199 aa13.45□□□□□ -0.26
NEDD1-208ENST00000555806 SCGB1D2O95969 90 aa13.45□□□□□ -0.26
NEDD1-208ENST00000555806 ID3Q02535 119 aa13.45□□□□□ -0.26
NEDD1-208ENST00000555806 CNPY1Q3B7I2 92 aa13.45□□□□□ -0.26
NEDD1-208ENST00000555806 ACOT7LQ6ZUV0 252 aa13.45□□□□□ -0.26
NEDD1-208ENST00000555806 OR4D5Q8NGN0 318 aa13.45□□□□□ -0.26
NEDD1-208ENST00000555806 RAB40CQ96S21 281 aa13.45□□□□□ -0.26
NEDD1-208ENST00000555806 C20orf85Q9H1P6 137 aa13.45□□□□□ -0.26
NEDD1-208ENST00000555806 PSENENQ9NZ42 101 aa13.45□□□□□ -0.26
NEDD1-208ENST00000555806 SMCO3A2RU48 225 aa13.44□□□□□ -0.26
NEDD1-208ENST00000555806 LYRM1O43325 122 aa13.44□□□□□ -0.26
NEDD1-208ENST00000555806 C4BPBP20851 252 aa13.44□□□□□ -0.26
NEDD1-208ENST00000555806 TMEM41BQ5BJD5 291 aa13.44□□□□□ -0.26
NEDD1-208ENST00000555806 C11orf68Q9H3H3 251 aaKnown RBP13.44□□□□□ -0.26
NEDD1-208ENST00000555806 SEPSECSQ9HD40 501 aaKnown RBP13.44□□□□□ -0.26
NEDD1-208ENST00000555806 FBXL17Q9UF56 701 aa13.44□□□□□ -0.26
NEDD1-208ENST00000555806 AGRNO00468 2067 aa13.44□□□□□ -0.26
NEDD1-208ENST00000555806 DNAH1Q9P2D7 4330 aa13.44□□□□□ -0.26
NEDD1-208ENST00000555806 PLECQ15149 4684 aaKnown RBP13.43□□□□□ -0.26
NEDD1-208ENST00000555806 ALMS1Q8TCU4 4167 aa13.43□□□□□ -0.26
NEDD1-208ENST00000555806 DEFB4AO15263 64 aa13.43□□□□□ -0.26
NEDD1-208ENST00000555806 PLA2G10O15496 165 aa13.43□□□□□ -0.26
NEDD1-208ENST00000555806 IAH1Q2TAA2 248 aaPredicted RBP13.43□□□□□ -0.26
NEDD1-208ENST00000555806 C1orf194Q5T5A4 169 aa13.43□□□□□ -0.26
NEDD1-208ENST00000555806 CEMP1Q6PRD7 247 aaPredicted RBP13.43□□□□□ -0.26
NEDD1-208ENST00000555806 BPIFCQ8NFQ6 507 aa13.43□□□□□ -0.26
NEDD1-208ENST00000555806 CFDP00746 253 aaPredicted RBP13.42□□□□□ -0.26
NEDD1-208ENST00000555806 GIG44P09565 113 aaPredicted RBP13.42□□□□□ -0.26
NEDD1-208ENST00000555806 OR8I2Q8N0Y5 310 aa13.42□□□□□ -0.26
NEDD1-208ENST00000555806 C11orf45Q8TAV5 145 aa13.42□□□□□ -0.26
NEDD1-208ENST00000555806 MITD1Q8WV92 249 aa13.42□□□□□ -0.26
NEDD1-208ENST00000555806 GSKIPQ9P0R6 139 aa13.42□□□□□ -0.26
NEDD1-208ENST00000555806 KLK5Q9Y337 293 aaPredicted RBP13.42□□□□□ -0.26
NEDD1-208ENST00000555806 GATA2P23769 480 aaPredicted RBP13.41□□□□□ -0.26
NEDD1-208ENST00000555806 ID1P41134 155 aa13.41□□□□□ -0.26
NEDD1-208ENST00000555806 ZBTB8BQ8NAP8 495 aaPredicted RBP13.41□□□□□ -0.26
NEDD1-208ENST00000555806 PHLDA1Q8WV24 401 aaPredicted RBP13.41□□□□□ -0.26
NEDD1-208ENST00000555806 SMIM8Q96KF7 97 aa13.41□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 97 ms