RNA–Protein interactions for RNA: ENST00000555569.1

PCNX4-209, Transcript of pecanex 4, humanhuman

TSL 3

Gene PCNX4, Length 515 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX4-209ENST00000555569 TRPT1Q86TN4 253 aaKnown RBP10.09□□□□□ -0.79
PCNX4-209ENST00000555569 OR51G1Q8NGK1 321 aa10.09□□□□□ -0.79
PCNX4-209ENST00000555569 LINC00476Q8WZB0 136 aa10.09□□□□□ -0.79
PCNX4-209ENST00000555569 SLC35E1Q96K37 410 aa10.09□□□□□ -0.79
PCNX4-209ENST00000555569 C11orf68Q9H3H3 251 aaKnown RBP10.09□□□□□ -0.79
PCNX4-209ENST00000555569 ZFP92A6NM28 416 aa10.08□□□□□ -0.8
PCNX4-209ENST00000555569 FAM90A26D6RGX4 464 aa10.08□□□□□ -0.8
PCNX4-209ENST00000555569 ZNF701M0R085 212 aaPredicted RBP10.08□□□□□ -0.8
PCNX4-209ENST00000555569 BUB3O43684 328 aa10.08□□□□□ -0.8
PCNX4-209ENST00000555569 MED6O75586 246 aa10.08□□□□□ -0.8
PCNX4-209ENST00000555569 SPP1P10451 314 aa10.08□□□□□ -0.8
PCNX4-209ENST00000555569 IAPPP10997 89 aa10.08□□□□□ -0.8
PCNX4-209ENST00000555569 PPP1R1AQ13522 171 aa10.08□□□□□ -0.8
PCNX4-209ENST00000555569 GAMTQ14353 236 aa10.08□□□□□ -0.8
PCNX4-209ENST00000555569 TMEM41BQ5BJD5 291 aa10.08□□□□□ -0.8
PCNX4-209ENST00000555569 ACTL10Q5JWF8 245 aa10.08□□□□□ -0.8
PCNX4-209ENST00000555569 MORN3Q6PF18 240 aaPredicted RBP10.08□□□□□ -0.8
PCNX4-209ENST00000555569 CENPSQ8N2Z9 138 aa10.08□□□□□ -0.8
PCNX4-209ENST00000555569 PHLDA1Q8WV24 401 aaPredicted RBP10.08□□□□□ -0.8
PCNX4-209ENST00000555569 RNF125Q96EQ8 232 aa10.08□□□□□ -0.8
PCNX4-209ENST00000555569 TMED3Q9Y3Q3 217 aa10.08□□□□□ -0.8
PCNX4-209ENST00000555569 LCE2BO14633 110 aa10.07□□□□□ -0.8
PCNX4-209ENST00000555569 LY6G6CO95867 125 aa10.07□□□□□ -0.8
PCNX4-209ENST00000555569 GIG44P09565 113 aaPredicted RBP10.07□□□□□ -0.8
PCNX4-209ENST00000555569 NUP62P37198 522 aaPredicted RBP10.07□□□□□ -0.8
PCNX4-209ENST00000555569 RAB11AP62491 216 aa10.07□□□□□ -0.8
PCNX4-209ENST00000555569 PSMG4Q5JS54 123 aa10.07□□□□□ -0.8
PCNX4-209ENST00000555569 SIGLEC15Q6ZMC9 328 aa10.07□□□□□ -0.8
PCNX4-209ENST00000555569 C11orf45Q8TAV5 145 aa10.07□□□□□ -0.8
PCNX4-209ENST00000555569 RAB40CQ96S21 281 aa10.07□□□□□ -0.8
PCNX4-209ENST00000555569 PBDC1Q9BVG4 233 aa10.07□□□□□ -0.8
PCNX4-209ENST00000555569 SRRQ9GZT4 340 aa10.07□□□□□ -0.8
PCNX4-209ENST00000555569 NRN1Q9NPD7 142 aa10.07□□□□□ -0.8
PCNX4-209ENST00000555569 PAIP2BQ9ULR5 123 aaKnown RBP10.07□□□□□ -0.8
PCNX4-209ENST00000555569 IGKV1D-37A0A075B6S9 117 aa10.06□□□□□ -0.8
PCNX4-209ENST00000555569 DEFB4AO15263 64 aa10.06□□□□□ -0.8
PCNX4-209ENST00000555569 FABP1P07148 127 aa10.06□□□□□ -0.8
PCNX4-209ENST00000555569 HOXB5P09067 269 aa10.06□□□□□ -0.8
PCNX4-209ENST00000555569 C4BPBP20851 252 aa10.06□□□□□ -0.8
PCNX4-209ENST00000555569 NANOS2P60321 138 aaKnown RBP10.06□□□□□ -0.8
PCNX4-209ENST00000555569 UBE2MP61081 183 aaKnown RBP10.06□□□□□ -0.8
PCNX4-209ENST00000555569 SNRPD3P62318 126 aaKnown RBP10.06□□□□□ -0.8
PCNX4-209ENST00000555569 ZNF90Q03938 601 aa10.06□□□□□ -0.8
PCNX4-209ENST00000555569 OR8G2PQ6IF36 304 aa10.06□□□□□ -0.8
PCNX4-209ENST00000555569 CIB3Q96Q77 187 aaPredicted RBP10.06□□□□□ -0.8
PCNX4-209ENST00000555569 MFFQ9GZY8 342 aa10.06□□□□□ -0.8
PCNX4-209ENST00000555569 SEPSECSQ9HD40 501 aaKnown RBP10.06□□□□□ -0.8
PCNX4-209ENST00000555569 FBXL17Q9UF56 701 aa10.06□□□□□ -0.8
PCNX4-209ENST00000555569 PFDN2Q9UHV9 154 aa10.06□□□□□ -0.8
PCNX4-209ENST00000555569 SYNGR2O43760 224 aa10.05□□□□□ -0.8
PCNX4-209ENST00000555569 INPP1P49441 399 aa10.05□□□□□ -0.8
PCNX4-209ENST00000555569 LYZP61626 148 aa10.05□□□□□ -0.8
PCNX4-209ENST00000555569 RPP30P78346 268 aaKnown RBP10.05□□□□□ -0.8
PCNX4-209ENST00000555569 GGNBP1Q5YKI7 109 aa10.05□□□□□ -0.8
PCNX4-209ENST00000555569 TRIQKQ629K1 86 aa10.05□□□□□ -0.8
PCNX4-209ENST00000555569 TRGV9Q99603 122 aa10.05□□□□□ -0.8
PCNX4-209ENST00000555569 MAGT1Q9H0U3 335 aa10.05□□□□□ -0.8
PCNX4-209ENST00000555569 NAP1L6A6NFF2 107 aa10.04□□□□□ -0.8
PCNX4-209ENST00000555569 WRBO00258 174 aa10.04□□□□□ -0.8
PCNX4-209ENST00000555569 OR2F1Q13607 317 aa10.04□□□□□ -0.8
PCNX4-209ENST00000555569 BAK1Q16611 211 aa10.04□□□□□ -0.8
PCNX4-209ENST00000555569 THAP8Q8NA92 274 aa10.04□□□□□ -0.8
PCNX4-209ENST00000555569 Q8NAQ8 132 aa10.04□□□□□ -0.8
PCNX4-209ENST00000555569 C9orf170A2RU37 121 aa10.03□□□□□ -0.8
PCNX4-209ENST00000555569 ZNF705EA8MWA4 302 aaPredicted RBP10.03□□□□□ -0.8
PCNX4-209ENST00000555569 SNRPGP15A8MWD9 76 aa10.03□□□□□ -0.8
PCNX4-209ENST00000555569 NDUFB6O95139 128 aa10.03□□□□□ -0.8
PCNX4-209ENST00000555569 MIFP14174 115 aa10.03□□□□□ -0.8
PCNX4-209ENST00000555569 CLEC5AQ9NY25 188 aa10.03□□□□□ -0.8
PCNX4-209ENST00000555569 HYDINQ4G0P3 5121 aa10.02□□□□□ -0.8
PCNX4-209ENST00000555569 IGKV1OR2-108A0A075B7D4 117 aa10.02□□□□□ -0.81
PCNX4-209ENST00000555569 IGHV4-28A0A0C4DH34 117 aa10.02□□□□□ -0.81
PCNX4-209ENST00000555569 PRSS46E5RG02 174 aa10.02□□□□□ -0.81
PCNX4-209ENST00000555569 H3BMM0 161 aa10.02□□□□□ -0.81
PCNX4-209ENST00000555569 RBMY1A1P0DJD3 496 aaKnown RBP10.02□□□□□ -0.81
PCNX4-209ENST00000555569 RBMY1CP0DJD4 496 aa10.02□□□□□ -0.81
PCNX4-209ENST00000555569 NKX2-1P43699 371 aaPredicted RBP10.02□□□□□ -0.81
PCNX4-209ENST00000555569 NUTF2P61970 127 aaKnown RBP10.02□□□□□ -0.81
PCNX4-209ENST00000555569 RBMY1FQ15415 496 aaKnown RBP10.02□□□□□ -0.81
PCNX4-209ENST00000555569 SPANXN5Q5MJ07 72 aa10.02□□□□□ -0.81
PCNX4-209ENST00000555569 C1orf194Q5T5A4 169 aa10.02□□□□□ -0.81
PCNX4-209ENST00000555569 CSNK1G2-AS1Q8NCQ2 148 aa10.02□□□□□ -0.81
PCNX4-209ENST00000555569 PPP1R14BQ96C90 147 aa10.02□□□□□ -0.81
PCNX4-209ENST00000555569 FLVCR2Q9UPI3 526 aa10.02□□□□□ -0.81
PCNX4-209ENST00000555569 LINC00854A0A1B0GVQ3 168 aa10.01□□□□□ -0.81
PCNX4-209ENST00000555569 ADAP1O75689 374 aa10.01□□□□□ -0.81
PCNX4-209ENST00000555569 CFDP00746 253 aaPredicted RBP10.01□□□□□ -0.81
PCNX4-209ENST00000555569 HLA-DRB4P13762 266 aa10.01□□□□□ -0.81
PCNX4-209ENST00000555569 ID1P41134 155 aa10.01□□□□□ -0.81
PCNX4-209ENST00000555569 ID3Q02535 119 aa10.01□□□□□ -0.81
PCNX4-209ENST00000555569 COQ8AQ8NI60 647 aa10.01□□□□□ -0.81
PCNX4-209ENST00000555569 SDHCQ99643 169 aaPredicted RBP10.01□□□□□ -0.81
PCNX4-209ENST00000555569 C1QTNF4Q9BXJ3 329 aa10.01□□□□□ -0.81
PCNX4-209ENST00000555569 WDR12Q9GZL7 423 aaKnown RBP10.01□□□□□ -0.81
PCNX4-209ENST00000555569 HRH4Q9H3N8 390 aa10.01□□□□□ -0.81
PCNX4-209ENST00000555569 TBC1D24Q9ULP9 559 aa10.01□□□□□ -0.81
PCNX4-209ENST00000555569 STRAPQ9Y3F4 350 aaKnown RBP10.01□□□□□ -0.81
PCNX4-209ENST00000555569 HLA-DRB4X5D2U9 266 aa10.01□□□□□ -0.81
PCNX4-209ENST00000555569 X6R8D5 127 aa10.01□□□□□ -0.81
PCNX4-209ENST00000555569 CENPXA8MT69 81 aa10□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms