RNA–Protein interactions for RNA: ENST00000555323.1

SYNE2-219, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 3

Gene SYNE2, Length 389 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-219ENST00000555323 YIF1AO95070 293 aa9.63□□□□□ -0.87
SYNE2-219ENST00000555323 IGLL1P15814 213 aa9.63□□□□□ -0.87
SYNE2-219ENST00000555323 NUP62P37198 522 aaPredicted RBP9.63□□□□□ -0.87
SYNE2-219ENST00000555323 PLP1P60201 277 aa9.63□□□□□ -0.87
SYNE2-219ENST00000555323 SELENOTP62341 195 aa9.63□□□□□ -0.87
SYNE2-219ENST00000555323 TMEM182Q6ZP80 229 aaPredicted RBP9.63□□□□□ -0.87
SYNE2-219ENST00000555323 CYP2G1PQ6ZSU1 146 aa9.63□□□□□ -0.87
SYNE2-219ENST00000555323 OR11H4Q8NGC9 324 aa9.63□□□□□ -0.87
SYNE2-219ENST00000555323 GINS3Q9BRX5 216 aa9.63□□□□□ -0.87
SYNE2-219ENST00000555323 C20orf24Q9BUV8 137 aa9.63□□□□□ -0.87
SYNE2-219ENST00000555323 GPR61Q9BZJ8 451 aa9.63□□□□□ -0.87
SYNE2-219ENST00000555323 SLC45A2Q9UMX9 530 aa9.63□□□□□ -0.87
SYNE2-219ENST00000555323 VWFP04275 2813 aa9.63□□□□□ -0.87
SYNE2-219ENST00000555323 CMYA5Q8N3K9 4069 aa9.62□□□□□ -0.87
SYNE2-219ENST00000555323 FXYD6-FXYD2A0A087WZ82 144 aa9.62□□□□□ -0.87
SYNE2-219ENST00000555323 AGPAT2O15120 278 aa9.62□□□□□ -0.87
SYNE2-219ENST00000555323 FOLR2P14207 255 aa9.62□□□□□ -0.87
SYNE2-219ENST00000555323 CRYBB3P26998 211 aa9.62□□□□□ -0.87
SYNE2-219ENST00000555323 RAB31Q13636 194 aa9.62□□□□□ -0.87
SYNE2-219ENST00000555323 SAMD5Q5TGI4 173 aa9.62□□□□□ -0.87
SYNE2-219ENST00000555323 BTNL8Q6UX41 500 aa9.62□□□□□ -0.87
SYNE2-219ENST00000555323 AKAP14Q86UN6 197 aa9.62□□□□□ -0.87
SYNE2-219ENST00000555323 MGST2Q99735 147 aa9.62□□□□□ -0.87
SYNE2-219ENST00000555323 ATP5SQ99766 215 aa9.62□□□□□ -0.87
SYNE2-219ENST00000555323 NEURL2Q9BR09 285 aa9.62□□□□□ -0.87
SYNE2-219ENST00000555323 PARD6GQ9BYG4 376 aaPredicted RBP9.62□□□□□ -0.87
SYNE2-219ENST00000555323 WDR61Q9GZS3 305 aaKnown RBP9.62□□□□□ -0.87
SYNE2-219ENST00000555323 WFDC1Q9HC57 220 aa9.62□□□□□ -0.87
SYNE2-219ENST00000555323 SMPXQ9UHP9 88 aa9.62□□□□□ -0.87
SYNE2-219ENST00000555323 U3KQE9 123 aa9.62□□□□□ -0.87
SYNE2-219ENST00000555323 IGHV7-4-1A0A0J9YVY3 117 aa9.61□□□□□ -0.87
SYNE2-219ENST00000555323 IGLV1-51P01701 117 aa9.61□□□□□ -0.87
SYNE2-219ENST00000555323 IL4P05112 153 aa9.61□□□□□ -0.87
SYNE2-219ENST00000555323 NPPCP23582 126 aa9.61□□□□□ -0.87
SYNE2-219ENST00000555323 RPL29P47914 159 aaKnown RBP9.61□□□□□ -0.87
SYNE2-219ENST00000555323 CAMLGP49069 296 aa9.61□□□□□ -0.87
SYNE2-219ENST00000555323 OR2F1Q13607 317 aa9.61□□□□□ -0.87
SYNE2-219ENST00000555323 ZNF345Q14585 488 aa9.61□□□□□ -0.87
SYNE2-219ENST00000555323 CLINT1Q14677 625 aa9.61□□□□□ -0.87
SYNE2-219ENST00000555323 USF2Q15853 346 aaPredicted RBP9.61□□□□□ -0.87
SYNE2-219ENST00000555323 OXLD1Q5BKU9 147 aa9.61□□□□□ -0.87
SYNE2-219ENST00000555323 BPIFCQ8NFQ6 507 aa9.61□□□□□ -0.87
SYNE2-219ENST00000555323 RNF125Q96EQ8 232 aa9.61□□□□□ -0.87
SYNE2-219ENST00000555323 MFFQ9GZY8 342 aa9.61□□□□□ -0.87
SYNE2-219ENST00000555323 VSIRQ9H7M9 311 aa9.61□□□□□ -0.87
SYNE2-219ENST00000555323 TECRQ9NZ01 308 aaKnown RBP9.61□□□□□ -0.87
SYNE2-219ENST00000555323 IGHV3OR16-8A0A075B7F1 116 aa9.6□□□□□ -0.87
SYNE2-219ENST00000555323 UBE2L5PA0A1B0GUS4 154 aa9.6□□□□□ -0.87
SYNE2-219ENST00000555323 CHEK1O14757 476 aa9.6□□□□□ -0.87
SYNE2-219ENST00000555323 ARPC5O15511 151 aa9.6□□□□□ -0.87
SYNE2-219ENST00000555323 SAP30O75446 220 aa9.6□□□□□ -0.87
SYNE2-219ENST00000555323 C1QBP02746 253 aa9.6□□□□□ -0.87
SYNE2-219ENST00000555323 LINC00869P0C866 280 aa9.6□□□□□ -0.87
SYNE2-219ENST00000555323 EDN2P20800 178 aa9.6□□□□□ -0.87
SYNE2-219ENST00000555323 GATA2P23769 480 aaPredicted RBP9.6□□□□□ -0.87
SYNE2-219ENST00000555323 PRR20EP86478 221 aa9.6□□□□□ -0.87
SYNE2-219ENST00000555323 PRR20CP86479 221 aa9.6□□□□□ -0.87
SYNE2-219ENST00000555323 PRR20DP86480 221 aa9.6□□□□□ -0.87
SYNE2-219ENST00000555323 PRR20BP86481 221 aa9.6□□□□□ -0.87
SYNE2-219ENST00000555323 PRR20AP86496 221 aa9.6□□□□□ -0.87
SYNE2-219ENST00000555323 EGFEM1PQ0D2K5 195 aa9.6□□□□□ -0.87
SYNE2-219ENST00000555323 DEFB114Q30KQ6 69 aa9.6□□□□□ -0.87
SYNE2-219ENST00000555323 PXDC1Q5TGL8 231 aa9.6□□□□□ -0.87
SYNE2-219ENST00000555323 OR2K2Q8NGT1 345 aa9.6□□□□□ -0.87
SYNE2-219ENST00000555323 METTL26Q96S19 204 aa9.6□□□□□ -0.87
SYNE2-219ENST00000555323 GGTLC1Q9BX51 225 aa9.6□□□□□ -0.87
SYNE2-219ENST00000555323 SMIM3Q9BZL3 60 aa9.6□□□□□ -0.87
SYNE2-219ENST00000555323 FBXL17Q9UF56 701 aa9.6□□□□□ -0.87
SYNE2-219ENST00000555323 NOTCH3Q9UM47 2321 aa9.6□□□□□ -0.87
SYNE2-219ENST00000555323 A0A1W2PS18 150 aa9.59□□□□□ -0.87
SYNE2-219ENST00000555323 TAAR5O14804 337 aa9.59□□□□□ -0.87
SYNE2-219ENST00000555323 BUB3O43684 328 aa9.59□□□□□ -0.87
SYNE2-219ENST00000555323 HNRNPCP07910 306 aaKnown RBP eCLIP9.59□□□□□ -0.87
SYNE2-219ENST00000555323 FGF7P21781 194 aa9.59□□□□□ -0.87
SYNE2-219ENST00000555323 AP2S1P53680 142 aaPredicted RBP9.59□□□□□ -0.87
SYNE2-219ENST00000555323 ZNF266Q14584 549 aa9.59□□□□□ -0.87
SYNE2-219ENST00000555323 OPCMLQ14982 345 aa9.59□□□□□ -0.87
SYNE2-219ENST00000555323 KPRPQ5T749 579 aaPredicted RBP9.59□□□□□ -0.87
SYNE2-219ENST00000555323 KCNRGQ8N5I3 272 aa9.59□□□□□ -0.87
SYNE2-219ENST00000555323 HYLS1Q96M11 299 aa9.59□□□□□ -0.87
SYNE2-219ENST00000555323 RHPN1-AS1Q9BWJ2 59 aa9.59□□□□□ -0.87
SYNE2-219ENST00000555323 NPCDR1Q9BY65 106 aa9.59□□□□□ -0.87
SYNE2-219ENST00000555323 MLXQ9UH92 298 aa9.59□□□□□ -0.87
SYNE2-219ENST00000555323 TRAV25A0A0B4J276 109 aa9.58□□□□□ -0.88
SYNE2-219ENST00000555323 A0A0D9SG52 128 aa9.58□□□□□ -0.88
SYNE2-219ENST00000555323 G3V4G9 280 aa9.58□□□□□ -0.88
SYNE2-219ENST00000555323 ZNF207O43670 478 aaKnown RBP9.58□□□□□ -0.88
SYNE2-219ENST00000555323 IFNA5P01569 189 aa9.58□□□□□ -0.88
SYNE2-219ENST00000555323 APOHP02749 345 aaPredicted RBP9.58□□□□□ -0.88
SYNE2-219ENST00000555323 CD5P06127 495 aa9.58□□□□□ -0.88
SYNE2-219ENST00000555323 BMI1P35226 326 aa9.58□□□□□ -0.88
SYNE2-219ENST00000555323 EIF2B2P49770 351 aaKnown RBP9.58□□□□□ -0.88
SYNE2-219ENST00000555323 LYZP61626 148 aa9.58□□□□□ -0.88
SYNE2-219ENST00000555323 FAM90A2PQ658T7 463 aa9.58□□□□□ -0.88
SYNE2-219ENST00000555323 Q6ZRG5 221 aa9.58□□□□□ -0.88
SYNE2-219ENST00000555323 STPG3Q8N7X2 389 aa9.58□□□□□ -0.88
SYNE2-219ENST00000555323 SCGB1C1Q8TD33 95 aa9.58□□□□□ -0.88
SYNE2-219ENST00000555323 RABAC1Q9UI14 185 aa9.58□□□□□ -0.88
SYNE2-219ENST00000555323 ELOA3CA0A087WX78 387 aaPredicted RBP9.57□□□□□ -0.88
SYNE2-219ENST00000555323 CXCL2P19875 107 aa9.57□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms