RNA–Protein interactions for RNA: ENST00000555317.5

SRP54-206, Transcript of signal recognition particle 54, humanhuman

TSL 2

Gene SRP54, Length 644 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-206ENST00000555317 RABAC1Q9UI14 185 aa9.06□□□□□ -0.96
SRP54-206ENST00000555317 DFFBO76075 338 aa9.05□□□□□ -0.96
SRP54-206ENST00000555317 APOHP02749 345 aaPredicted RBP9.05□□□□□ -0.96
SRP54-206ENST00000555317 CRYBB3P26998 211 aa9.05□□□□□ -0.96
SRP54-206ENST00000555317 P2RY1P47900 373 aa9.05□□□□□ -0.96
SRP54-206ENST00000555317 HAGHQ16775 308 aa9.05□□□□□ -0.96
SRP54-206ENST00000555317 OR8G2PQ6IF36 304 aa9.05□□□□□ -0.96
SRP54-206ENST00000555317 GSG1LQ6UXU4 331 aa9.05□□□□□ -0.96
SRP54-206ENST00000555317 SMIM8Q96KF7 97 aa9.05□□□□□ -0.96
SRP54-206ENST00000555317 UBQLN2Q9UHD9 624 aa9.05□□□□□ -0.96
SRP54-206ENST00000555317 HELTA6NFD8 242 aa9.04□□□□□ -0.96
SRP54-206ENST00000555317 PRAF2O60831 178 aa9.04□□□□□ -0.96
SRP54-206ENST00000555317 IL5P05113 134 aa9.04□□□□□ -0.96
SRP54-206ENST00000555317 PSG1P11464 419 aa9.04□□□□□ -0.96
SRP54-206ENST00000555317 PVALBP20472 110 aaPredicted RBP9.04□□□□□ -0.96
SRP54-206ENST00000555317 S100A10P60903 97 aa9.04□□□□□ -0.96
SRP54-206ENST00000555317 LYZP61626 148 aa9.04□□□□□ -0.96
SRP54-206ENST00000555317 ACOT7LQ6ZUV0 252 aa9.04□□□□□ -0.96
SRP54-206ENST00000555317 NRARPQ7Z6K4 114 aa9.04□□□□□ -0.96
SRP54-206ENST00000555317 WFDC3Q8IUB2 231 aa9.04□□□□□ -0.96
SRP54-206ENST00000555317 STXBP6Q8NFX7 210 aa9.04□□□□□ -0.96
SRP54-206ENST00000555317 PPP1R14BQ96C90 147 aa9.04□□□□□ -0.96
SRP54-206ENST00000555317 RNF125Q96EQ8 232 aa9.04□□□□□ -0.96
SRP54-206ENST00000555317 WWC2-AS2Q96NR7 200 aa9.04□□□□□ -0.96
SRP54-206ENST00000555317 TRGV9Q99603 122 aa9.04□□□□□ -0.96
SRP54-206ENST00000555317 GGTLC1Q9BX51 225 aa9.04□□□□□ -0.96
SRP54-206ENST00000555317 MGAT4CQ9UBM8 478 aa9.04□□□□□ -0.96
SRP54-206ENST00000555317 RCL1Q9Y2P8 373 aaKnown RBP9.04□□□□□ -0.96
SRP54-206ENST00000555317 LSM5Q9Y4Y9 91 aaKnown RBP9.04□□□□□ -0.96
SRP54-206ENST00000555317 LOC102724200A0A096LPH7 203 aaPredicted RBP9.03□□□□□ -0.96
SRP54-206ENST00000555317 SNRPGP15A8MWD9 76 aa9.03□□□□□ -0.96
SRP54-206ENST00000555317 INMT-MINDY4F8WBC2 141 aa9.03□□□□□ -0.96
SRP54-206ENST00000555317 TSC22D2O75157 780 aa9.03□□□□□ -0.96
SRP54-206ENST00000555317 MBPP02686 304 aaPredicted RBP9.03□□□□□ -0.96
SRP54-206ENST00000555317 S100A7P31151 101 aa9.03□□□□□ -0.96
SRP54-206ENST00000555317 BCAP31P51572 246 aa9.03□□□□□ -0.96
SRP54-206ENST00000555317 TAS2R30P59541 319 aa9.03□□□□□ -0.96
SRP54-206ENST00000555317 IFITM3Q01628 133 aa9.03□□□□□ -0.96
SRP54-206ENST00000555317 ZNF90Q03938 601 aa9.03□□□□□ -0.96
SRP54-206ENST00000555317 OR2F1Q13607 317 aa9.03□□□□□ -0.96
SRP54-206ENST00000555317 USF2Q15853 346 aaPredicted RBP9.03□□□□□ -0.96
SRP54-206ENST00000555317 OR10P1Q8NGE3 313 aa9.03□□□□□ -0.96
SRP54-206ENST00000555317 C2orf50Q96LR7 162 aa9.03□□□□□ -0.96
SRP54-206ENST00000555317 FAM110AQ9BQ89 295 aa9.03□□□□□ -0.96
SRP54-206ENST00000555317 TM2D3Q9BRN9 247 aa9.03□□□□□ -0.96
SRP54-206ENST00000555317 MS4A6AQ9H2W1 248 aa9.03□□□□□ -0.96
SRP54-206ENST00000555317 TRAV2A0A0B4J234 112 aa9.02□□□□□ -0.97
SRP54-206ENST00000555317 RBMY1BA6NDE4 496 aaKnown RBP9.02□□□□□ -0.97
SRP54-206ENST00000555317 RBMY1EA6NEQ0 496 aaKnown RBP9.02□□□□□ -0.97
SRP54-206ENST00000555317 CFDP00746 253 aaPredicted RBP9.02□□□□□ -0.97
SRP54-206ENST00000555317 RBMY1DP0C7P1 496 aaKnown RBP9.02□□□□□ -0.97
SRP54-206ENST00000555317 METTL15P1P0C7V9 234 aa9.02□□□□□ -0.97
SRP54-206ENST00000555317 CAV2P51636 162 aa9.02□□□□□ -0.97
SRP54-206ENST00000555317 AP2S1P53680 142 aaPredicted RBP9.02□□□□□ -0.97
SRP54-206ENST00000555317 APOC4P55056 127 aa9.02□□□□□ -0.97
SRP54-206ENST00000555317 ODF3L2Q3SX64 289 aa9.02□□□□□ -0.97
SRP54-206ENST00000555317 FAM90A2PQ658T7 463 aa9.02□□□□□ -0.97
SRP54-206ENST00000555317 THAP8Q8NA92 274 aa9.02□□□□□ -0.97
SRP54-206ENST00000555317 BPIFCQ8NFQ6 507 aa9.02□□□□□ -0.97
SRP54-206ENST00000555317 IGKV1D-37A0A075B6S9 117 aa9.01□□□□□ -0.97
SRP54-206ENST00000555317 C7orf66A4D0T2 115 aa9.01□□□□□ -0.97
SRP54-206ENST00000555317 PRSS46E5RG02 174 aa9.01□□□□□ -0.97
SRP54-206ENST00000555317 K7EPK0 472 aa9.01□□□□□ -0.97
SRP54-206ENST00000555317 GOSR2O14653 212 aa9.01□□□□□ -0.97
SRP54-206ENST00000555317 SSNA1O43805 119 aa9.01□□□□□ -0.97
SRP54-206ENST00000555317 RRAS2P62070 204 aaPredicted RBP9.01□□□□□ -0.97
SRP54-206ENST00000555317 DLK1P80370 383 aa9.01□□□□□ -0.97
SRP54-206ENST00000555317 TMEM14EPQ6UXP3 125 aa9.01□□□□□ -0.97
SRP54-206ENST00000555317 LILRB2Q8N423 598 aa9.01□□□□□ -0.97
SRP54-206ENST00000555317 FBXL17Q9UF56 701 aa9.01□□□□□ -0.97
SRP54-206ENST00000555317 C16orf54Q6UWD8 224 aa9□□□□□ -0.97
SRP54-206ENST00000555317 SIGLEC15Q6ZMC9 328 aa9□□□□□ -0.97
SRP54-206ENST00000555317 LINC00322Q6ZN03 302 aaPredicted RBP9□□□□□ -0.97
SRP54-206ENST00000555317 TMEM144Q7Z5S9 345 aa9□□□□□ -0.97
SRP54-206ENST00000555317 STX12Q86Y82 276 aa9□□□□□ -0.97
SRP54-206ENST00000555317 APRG1Q8IVJ8 170 aa9□□□□□ -0.97
SRP54-206ENST00000555317 MAP6D1Q9H9H5 199 aa9□□□□□ -0.97
SRP54-206ENST00000555317 U3KQE9 123 aa9□□□□□ -0.97
SRP54-206ENST00000555317 IGKV1OR2-108A0A075B7D4 117 aa8.99□□□□□ -0.97
SRP54-206ENST00000555317 FNDC10F2Z333 226 aa8.99□□□□□ -0.97
SRP54-206ENST00000555317 BUB3O43684 328 aa8.99□□□□□ -0.97
SRP54-206ENST00000555317 RLN2P04090 185 aa8.99□□□□□ -0.97
SRP54-206ENST00000555317 RPL35AP18077 110 aaKnown RBP8.99□□□□□ -0.97
SRP54-206ENST00000555317 PAX9P55771 341 aa8.99□□□□□ -0.97
SRP54-206ENST00000555317 SNRPD3P62318 126 aaKnown RBP8.99□□□□□ -0.97
SRP54-206ENST00000555317 S100A7AQ86SG5 101 aa8.99□□□□□ -0.97
SRP54-206ENST00000555317 STPG3Q8N7X2 389 aa8.99□□□□□ -0.97
SRP54-206ENST00000555317 OR1B1Q8NGR6 318 aa8.99□□□□□ -0.97
SRP54-206ENST00000555317 GLMPQ8WWB7 406 aa8.99□□□□□ -0.97
SRP54-206ENST00000555317 MARVELD1Q9BSK0 173 aa8.99□□□□□ -0.97
SRP54-206ENST00000555317 TMEM147Q9BVK8 224 aa8.99□□□□□ -0.97
SRP54-206ENST00000555317 GGACTQ9BVM4 153 aa8.99□□□□□ -0.97
SRP54-206ENST00000555317 NPVFQ9HCQ7 196 aa8.99□□□□□ -0.97
SRP54-206ENST00000555317 RETNQ9HD89 108 aa8.99□□□□□ -0.97
SRP54-206ENST00000555317 K7EQG2 157 aa8.98□□□□□ -0.97
SRP54-206ENST00000555317 UBE2CO00762 179 aa8.98□□□□□ -0.97
SRP54-206ENST00000555317 CCNKO75909 580 aa8.98□□□□□ -0.97
SRP54-206ENST00000555317 ZNF688P0C7X2 276 aa8.98□□□□□ -0.97
SRP54-206ENST00000555317 ORM2P19652 201 aa8.98□□□□□ -0.97
SRP54-206ENST00000555317 DEFB131AP59861 70 aa8.98□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 65.7 ms