RNA–Protein interactions for RNA: ENST00000554685.2

SHOX2-206, Transcript of short stature homeobox 2, humanhuman

TSL 5

Gene SHOX2, Length 439 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX2-206ENST00000554685 M6PRP20645 277 aa11.11□□□□□ -0.63
SHOX2-206ENST00000554685 SULT1A2P50226 295 aa11.11□□□□□ -0.63
SHOX2-206ENST00000554685 ELLP55199 621 aaPredicted RBP11.11□□□□□ -0.63
SHOX2-206ENST00000554685 ZNF90Q03938 601 aa11.11□□□□□ -0.63
SHOX2-206ENST00000554685 TMEM41BQ5BJD5 291 aa11.11□□□□□ -0.63
SHOX2-206ENST00000554685 C4orf3Q8WVX3 66 aa11.11□□□□□ -0.63
SHOX2-206ENST00000554685 RNF2Q99496 336 aa11.11□□□□□ -0.63
SHOX2-206ENST00000554685 TSSC4Q9Y5U2 329 aaPredicted RBP11.11□□□□□ -0.63
SHOX2-206ENST00000554685 ZFHX3Q15911 3703 aa11.1□□□□□ -0.63
SHOX2-206ENST00000554685 ELOA3CA0A087WX78 387 aaPredicted RBP11.1□□□□□ -0.63
SHOX2-206ENST00000554685 ANKRD34BA5PLL1 514 aa11.1□□□□□ -0.63
SHOX2-206ENST00000554685 NUDT19A8MXV4 375 aa11.1□□□□□ -0.63
SHOX2-206ENST00000554685 OR2C1O95371 312 aa11.1□□□□□ -0.63
SHOX2-206ENST00000554685 PSG1P11464 419 aa11.1□□□□□ -0.63
SHOX2-206ENST00000554685 ADMP35318 185 aa11.1□□□□□ -0.63
SHOX2-206ENST00000554685 PLP1P60201 277 aa11.1□□□□□ -0.63
SHOX2-206ENST00000554685 TCTEX1D4Q5JR98 221 aa11.1□□□□□ -0.63
SHOX2-206ENST00000554685 CHRDL1Q9BU40 450 aa11.1□□□□□ -0.63
SHOX2-206ENST00000554685 BMPR1BO00238 502 aa11.09□□□□□ -0.63
SHOX2-206ENST00000554685 RGS13O14921 159 aa11.09□□□□□ -0.63
SHOX2-206ENST00000554685 COX7A2P2O60397 106 aa11.09□□□□□ -0.63
SHOX2-206ENST00000554685 HYPMO75409 117 aa11.09□□□□□ -0.63
SHOX2-206ENST00000554685 HSPB1P04792 205 aaKnown RBP11.09□□□□□ -0.63
SHOX2-206ENST00000554685 CD28P10747 220 aa11.09□□□□□ -0.63
SHOX2-206ENST00000554685 RAB14P61106 215 aa11.09□□□□□ -0.63
SHOX2-206ENST00000554685 IFITM2Q01629 132 aa11.09□□□□□ -0.63
SHOX2-206ENST00000554685 OR10G4Q8NGN3 311 aa11.09□□□□□ -0.63
SHOX2-206ENST00000554685 OR10G9Q8NGN4 311 aa11.09□□□□□ -0.63
SHOX2-206ENST00000554685 OR10G7Q8NGN6 311 aa11.09□□□□□ -0.63
SHOX2-206ENST00000554685 GATAD1Q8WUU5 269 aa11.09□□□□□ -0.63
SHOX2-206ENST00000554685 PFDN2Q9UHV9 154 aa11.09□□□□□ -0.63
SHOX2-206ENST00000554685 RNF24Q9Y225 148 aa11.09□□□□□ -0.63
SHOX2-206ENST00000554685 A0A1W2PPV4 95 aa11.08□□□□□ -0.64
SHOX2-206ENST00000554685 PPP5D1E7EU14 171 aa11.08□□□□□ -0.64
SHOX2-206ENST00000554685 I3L521 148 aa11.08□□□□□ -0.64
SHOX2-206ENST00000554685 NDUFA4O00483 81 aa11.08□□□□□ -0.64
SHOX2-206ENST00000554685 IL4P05112 153 aa11.08□□□□□ -0.64
SHOX2-206ENST00000554685 ZP3P21754 424 aa11.08□□□□□ -0.64
SHOX2-206ENST00000554685 GATA2P23769 480 aaPredicted RBP11.08□□□□□ -0.64
SHOX2-206ENST00000554685 LYZP61626 148 aa11.08□□□□□ -0.64
SHOX2-206ENST00000554685 RHOBP62745 196 aa11.08□□□□□ -0.64
SHOX2-206ENST00000554685 BLOC1S1P78537 153 aa11.08□□□□□ -0.64
SHOX2-206ENST00000554685 FAM106AQ4KMX7 169 aa11.08□□□□□ -0.64
SHOX2-206ENST00000554685 KLHL30-AS1Q8NEE0 82 aa11.08□□□□□ -0.64
SHOX2-206ENST00000554685 RNF125Q96EQ8 232 aa11.08□□□□□ -0.64
SHOX2-206ENST00000554685 SAT2Q96F10 170 aaPredicted RBP11.08□□□□□ -0.64
SHOX2-206ENST00000554685 OR5B12Q96R08 314 aa11.08□□□□□ -0.64
SHOX2-206ENST00000554685 ACTR3CQ9C0K3 210 aaPredicted RBP11.08□□□□□ -0.64
SHOX2-206ENST00000554685 DNAJC4Q9NNZ3 241 aa11.08□□□□□ -0.64
SHOX2-206ENST00000554685 PUS1Q9Y606 427 aaKnown RBP eCLIP11.08□□□□□ -0.64
SHOX2-206ENST00000554685 RFNGQ9Y644 331 aa11.08□□□□□ -0.64
SHOX2-206ENST00000554685 WI2-2373I1.2A0A1W2PRP0 233 aa11.07□□□□□ -0.64
SHOX2-206ENST00000554685 TEX46H3BTG2 121 aa11.07□□□□□ -0.64
SHOX2-206ENST00000554685 YIF1AO95070 293 aa11.07□□□□□ -0.64
SHOX2-206ENST00000554685 TRBV12-3P01733 135 aa11.07□□□□□ -0.64
SHOX2-206ENST00000554685 OR5G3P0C626 314 aa11.07□□□□□ -0.64
SHOX2-206ENST00000554685 ORM2P19652 201 aa11.07□□□□□ -0.64
SHOX2-206ENST00000554685 RPEL1Q2QD12 228 aa11.07□□□□□ -0.64
SHOX2-206ENST00000554685 FAM74A1Q5RGS3 127 aa11.07□□□□□ -0.64
SHOX2-206ENST00000554685 C10orf113Q5VZT2 155 aa11.07□□□□□ -0.64
SHOX2-206ENST00000554685 NDUFA11Q86Y39 141 aa11.07□□□□□ -0.64
SHOX2-206ENST00000554685 OR1B1Q8NGR6 318 aa11.07□□□□□ -0.64
SHOX2-206ENST00000554685 FAM213BQ8TBF2 198 aa11.07□□□□□ -0.64
SHOX2-206ENST00000554685 DPF1Q92782 380 aa11.07□□□□□ -0.64
SHOX2-206ENST00000554685 CITED2Q99967 270 aaPredicted RBP11.07□□□□□ -0.64
SHOX2-206ENST00000554685 PBDC1Q9BVG4 233 aa11.07□□□□□ -0.64
SHOX2-206ENST00000554685 MRPL32Q9BYC8 188 aaKnown RBP11.07□□□□□ -0.64
SHOX2-206ENST00000554685 RPRMQ9NS64 109 aa11.07□□□□□ -0.64
SHOX2-206ENST00000554685 HIGD1AQ9Y241 93 aa11.07□□□□□ -0.64
SHOX2-206ENST00000554685 ZNF705EA8MWA4 302 aaPredicted RBP11.06□□□□□ -0.64
SHOX2-206ENST00000554685 SEC14L6B5MCN3 397 aa11.06□□□□□ -0.64
SHOX2-206ENST00000554685 LINC01619G3V211 115 aa11.06□□□□□ -0.64
SHOX2-206ENST00000554685 CDC34P49427 236 aaPredicted RBP11.06□□□□□ -0.64
SHOX2-206ENST00000554685 RAB2AP61019 212 aa11.06□□□□□ -0.64
SHOX2-206ENST00000554685 AWAT1Q58HT5 328 aa11.06□□□□□ -0.64
SHOX2-206ENST00000554685 FAM122CQ6P4D5 195 aa11.06□□□□□ -0.64
SHOX2-206ENST00000554685 TOMM20LQ6UXN7 152 aa11.06□□□□□ -0.64
SHOX2-206ENST00000554685 PRIMA1Q86XR5 153 aa11.06□□□□□ -0.64
SHOX2-206ENST00000554685 GPHB5Q86YW7 130 aa11.06□□□□□ -0.64
SHOX2-206ENST00000554685 RABAC1Q9UI14 185 aa11.06□□□□□ -0.64
SHOX2-206ENST00000554685 CTXND1A0A1B0GTU2 59 aa11.05□□□□□ -0.64
SHOX2-206ENST00000554685 TAS2R45P59539 299 aa11.05□□□□□ -0.64
SHOX2-206ENST00000554685 KRTAP24-1Q3LI83 254 aa11.05□□□□□ -0.64
SHOX2-206ENST00000554685 RPP25LQ8N5L8 163 aaKnown RBP11.05□□□□□ -0.64
SHOX2-206ENST00000554685 C11orf44Q8N8P7 122 aa11.05□□□□□ -0.64
SHOX2-206ENST00000554685 OR1N2Q8NGR9 330 aa11.05□□□□□ -0.64
SHOX2-206ENST00000554685 TMEM158Q8WZ71 300 aa11.05□□□□□ -0.64
SHOX2-206ENST00000554685 NARS2Q96I59 477 aaKnown RBP11.05□□□□□ -0.64
SHOX2-206ENST00000554685 METTL26Q96S19 204 aa11.05□□□□□ -0.64
SHOX2-206ENST00000554685 VSIRQ9H7M9 311 aa11.05□□□□□ -0.64
SHOX2-206ENST00000554685 ZFAND3Q9H8U3 227 aa11.05□□□□□ -0.64
SHOX2-206ENST00000554685 DOK5Q9P104 306 aa11.05□□□□□ -0.64
SHOX2-206ENST00000554685 FUT9Q9Y231 359 aa11.05□□□□□ -0.64
SHOX2-206ENST00000554685 IGHV4OR15-8A0A075B7B6 117 aa11.04□□□□□ -0.64
SHOX2-206ENST00000554685 A0A087WW49 117 aa11.04□□□□□ -0.64
SHOX2-206ENST00000554685 IGHV3-35A0A0C4DH35 117 aa11.04□□□□□ -0.64
SHOX2-206ENST00000554685 HBE1P02100 147 aa11.04□□□□□ -0.64
SHOX2-206ENST00000554685 GCSAMLQ5JQS6 135 aa11.04□□□□□ -0.64
SHOX2-206ENST00000554685 FAM78BQ5VT40 261 aa11.04□□□□□ -0.64
SHOX2-206ENST00000554685 TMEM37Q8WXS4 190 aa11.04□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms