RNA–Protein interactions for RNA: ENST00000553949.1

SHMT2-209, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 3

Gene SHMT2, Length 552 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-209ENST00000553949 BTNL8Q6UX41 500 aa9.32□□□□□ -0.92
SHMT2-209ENST00000553949 TMEM182Q6ZP80 229 aaPredicted RBP9.32□□□□□ -0.92
SHMT2-209ENST00000553949 CYP2G1PQ6ZSU1 146 aa9.32□□□□□ -0.92
SHMT2-209ENST00000553949 OR51G1Q8NGK1 321 aa9.32□□□□□ -0.92
SHMT2-209ENST00000553949 MGST2Q99735 147 aa9.32□□□□□ -0.92
SHMT2-209ENST00000553949 MCRIP2Q9BUT9 160 aaKnown RBP9.32□□□□□ -0.92
SHMT2-209ENST00000553949 ELOVL1Q9BW60 279 aa9.32□□□□□ -0.92
SHMT2-209ENST00000553949 WFDC1Q9HC57 220 aa9.32□□□□□ -0.92
SHMT2-209ENST00000553949 DAZ1Q9NQZ3 744 aaKnown RBP9.32□□□□□ -0.92
SHMT2-209ENST00000553949 FBXL17Q9UF56 701 aa9.32□□□□□ -0.92
SHMT2-209ENST00000553949 C2orf70A6NJV1 201 aa9.31□□□□□ -0.92
SHMT2-209ENST00000553949 AGPAT2O15120 278 aa9.31□□□□□ -0.92
SHMT2-209ENST00000553949 MPDU1O75352 247 aa9.31□□□□□ -0.92
SHMT2-209ENST00000553949 C1QBP02746 253 aa9.31□□□□□ -0.92
SHMT2-209ENST00000553949 IL4P05112 153 aa9.31□□□□□ -0.92
SHMT2-209ENST00000553949 CSN3P07498 182 aa9.31□□□□□ -0.92
SHMT2-209ENST00000553949 IGLL1P15814 213 aa9.31□□□□□ -0.92
SHMT2-209ENST00000553949 EDN2P20800 178 aa9.31□□□□□ -0.92
SHMT2-209ENST00000553949 GATA2P23769 480 aaPredicted RBP9.31□□□□□ -0.92
SHMT2-209ENST00000553949 CAMLGP49069 296 aa9.31□□□□□ -0.92
SHMT2-209ENST00000553949 RAB31Q13636 194 aa9.31□□□□□ -0.92
SHMT2-209ENST00000553949 NEURL2Q9BR09 285 aa9.31□□□□□ -0.92
SHMT2-209ENST00000553949 GINS3Q9BRX5 216 aa9.31□□□□□ -0.92
SHMT2-209ENST00000553949 WDR61Q9GZS3 305 aaKnown RBP9.31□□□□□ -0.92
SHMT2-209ENST00000553949 MFFQ9GZY8 342 aa9.31□□□□□ -0.92
SHMT2-209ENST00000553949 SLC45A2Q9UMX9 530 aa9.31□□□□□ -0.92
SHMT2-209ENST00000553949 WI2-2373I1.2A0A1W2PRP0 233 aa9.3□□□□□ -0.92
SHMT2-209ENST00000553949 SAP30O75446 220 aa9.3□□□□□ -0.92
SHMT2-209ENST00000553949 CFDP00746 253 aaPredicted RBP9.3□□□□□ -0.92
SHMT2-209ENST00000553949 IFNA5P01569 189 aa9.3□□□□□ -0.92
SHMT2-209ENST00000553949 FOLR2P14207 255 aa9.3□□□□□ -0.92
SHMT2-209ENST00000553949 CBLN1P23435 193 aa9.3□□□□□ -0.92
SHMT2-209ENST00000553949 LYZP61626 148 aa9.3□□□□□ -0.92
SHMT2-209ENST00000553949 SELENOTP62341 195 aa9.3□□□□□ -0.92
SHMT2-209ENST00000553949 ZNF345Q14585 488 aa9.3□□□□□ -0.92
SHMT2-209ENST00000553949 USF2Q15853 346 aaPredicted RBP9.3□□□□□ -0.92
SHMT2-209ENST00000553949 ADAMTSL5Q6ZMM2 481 aa9.3□□□□□ -0.92
SHMT2-209ENST00000553949 BPIFCQ8NFQ6 507 aa9.3□□□□□ -0.92
SHMT2-209ENST00000553949 MARC2Q969Z3 335 aa9.3□□□□□ -0.92
SHMT2-209ENST00000553949 RNF125Q96EQ8 232 aa9.3□□□□□ -0.92
SHMT2-209ENST00000553949 METTL26Q96S19 204 aa9.3□□□□□ -0.92
SHMT2-209ENST00000553949 GGTLC1Q9BX51 225 aa9.3□□□□□ -0.92
SHMT2-209ENST00000553949 NPCDR1Q9BY65 106 aa9.3□□□□□ -0.92
SHMT2-209ENST00000553949 SIGLEC8Q9NYZ4 499 aa9.3□□□□□ -0.92
SHMT2-209ENST00000553949 IGHV7-4-1A0A0J9YVY3 117 aa9.29□□□□□ -0.92
SHMT2-209ENST00000553949 LINC00869P0C866 280 aa9.29□□□□□ -0.92
SHMT2-209ENST00000553949 C8orf88P0DMB2 117 aa9.29□□□□□ -0.92
SHMT2-209ENST00000553949 CXCL2P19875 107 aa9.29□□□□□ -0.92
SHMT2-209ENST00000553949 ZNF266Q14584 549 aa9.29□□□□□ -0.92
SHMT2-209ENST00000553949 OPCMLQ14982 345 aa9.29□□□□□ -0.92
SHMT2-209ENST00000553949 C9orf66Q5T8R8 295 aa9.29□□□□□ -0.92
SHMT2-209ENST00000553949 KCNRGQ8N5I3 272 aa9.29□□□□□ -0.92
SHMT2-209ENST00000553949 SCGB1C1Q8TD33 95 aa9.29□□□□□ -0.92
SHMT2-209ENST00000553949 HYLS1Q96M11 299 aa9.29□□□□□ -0.92
SHMT2-209ENST00000553949 PBDC1Q9BVG4 233 aa9.29□□□□□ -0.92
SHMT2-209ENST00000553949 PARD6GQ9BYG4 376 aaPredicted RBP9.29□□□□□ -0.92
SHMT2-209ENST00000553949 MRPL27Q9P0M9 148 aaKnown RBP9.29□□□□□ -0.92
SHMT2-209ENST00000553949 RABAC1Q9UI14 185 aa9.29□□□□□ -0.92
SHMT2-209ENST00000553949 IGHV3-49A0A0A0MS15 119 aa9.28□□□□□ -0.92
SHMT2-209ENST00000553949 A0A0D9SG52 128 aa9.28□□□□□ -0.92
SHMT2-209ENST00000553949 TAAR5O14804 337 aa9.28□□□□□ -0.92
SHMT2-209ENST00000553949 APOHP02749 345 aaPredicted RBP9.28□□□□□ -0.92
SHMT2-209ENST00000553949 ORM2P19652 201 aa9.28□□□□□ -0.92
SHMT2-209ENST00000553949 NPPCP23582 126 aa9.28□□□□□ -0.92
SHMT2-209ENST00000553949 CRYBB3P26998 211 aa9.28□□□□□ -0.92
SHMT2-209ENST00000553949 RPL29P47914 159 aaKnown RBP9.28□□□□□ -0.92
SHMT2-209ENST00000553949 EIF2B2P49770 351 aaKnown RBP9.28□□□□□ -0.92
SHMT2-209ENST00000553949 INSL3P51460 131 aa9.28□□□□□ -0.92
SHMT2-209ENST00000553949 PRR20EP86478 221 aa9.28□□□□□ -0.92
SHMT2-209ENST00000553949 PRR20CP86479 221 aa9.28□□□□□ -0.92
SHMT2-209ENST00000553949 PRR20DP86480 221 aa9.28□□□□□ -0.92
SHMT2-209ENST00000553949 PRR20BP86481 221 aa9.28□□□□□ -0.92
SHMT2-209ENST00000553949 PRR20AP86496 221 aa9.28□□□□□ -0.92
SHMT2-209ENST00000553949 ZFP69Q49AA0 526 aa9.28□□□□□ -0.92
SHMT2-209ENST00000553949 OXLD1Q5BKU9 147 aa9.28□□□□□ -0.92
SHMT2-209ENST00000553949 MIC13Q5XKP0 118 aa9.28□□□□□ -0.92
SHMT2-209ENST00000553949 STPG3Q8N7X2 389 aa9.28□□□□□ -0.92
SHMT2-209ENST00000553949 DYNLRB2Q8TF09 96 aa9.28□□□□□ -0.92
SHMT2-209ENST00000553949 GPR61Q9BZJ8 451 aa9.28□□□□□ -0.92
SHMT2-209ENST00000553949 SMPXQ9UHP9 88 aa9.28□□□□□ -0.92
SHMT2-209ENST00000553949 IGHV3OR16-13A0A075B7E8 117 aa9.27□□□□□ -0.93
SHMT2-209ENST00000553949 IGHV3-74A0A0B4J1X5 117 aa9.27□□□□□ -0.93
SHMT2-209ENST00000553949 IGHV3-66A0A0C4DH42 116 aa9.27□□□□□ -0.93
SHMT2-209ENST00000553949 CHEK1O14757 476 aa9.27□□□□□ -0.93
SHMT2-209ENST00000553949 HYPMO75409 117 aa9.27□□□□□ -0.93
SHMT2-209ENST00000553949 HNRNPCP07910 306 aaKnown RBP eCLIP9.27□□□□□ -0.93
SHMT2-209ENST00000553949 PLP1P60201 277 aa9.27□□□□□ -0.93
SHMT2-209ENST00000553949 ZNF709Q8N972 641 aa9.27□□□□□ -0.93
SHMT2-209ENST00000553949 OR1B1Q8NGR6 318 aa9.27□□□□□ -0.93
SHMT2-209ENST00000553949 ARPC5LQ9BPX5 153 aa9.27□□□□□ -0.93
SHMT2-209ENST00000553949 RHPN1-AS1Q9BWJ2 59 aa9.27□□□□□ -0.93
SHMT2-209ENST00000553949 ARL6Q9H0F7 186 aa9.27□□□□□ -0.93
SHMT2-209ENST00000553949 SLC39A9Q9NUM3 307 aa9.27□□□□□ -0.93
SHMT2-209ENST00000553949 DOK5Q9P104 306 aa9.27□□□□□ -0.93
SHMT2-209ENST00000553949 MLXQ9UH92 298 aa9.27□□□□□ -0.93
SHMT2-209ENST00000553949 PXMP4Q9Y6I8 212 aa9.27□□□□□ -0.93
SHMT2-209ENST00000553949 U3KQE9 123 aa9.27□□□□□ -0.93
SHMT2-209ENST00000553949 PKD1L1Q8TDX9 2849 aa9.26□□□□□ -0.93
SHMT2-209ENST00000553949 BORCS7-ASMTA0A0B4J1R7 106 aa9.26□□□□□ -0.93
SHMT2-209ENST00000553949 A0A1W2PS18 150 aa9.26□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 109.6 ms