RNA–Protein interactions for RNA: ENST00000553840.5

FOXN3-204, Transcript of forkhead box N3, humanhuman

TSL 4

Gene FOXN3, Length 555 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3-204ENST00000553840 CENPXA8MT69 81 aa13□□□□□ -0.33
FOXN3-204ENST00000553840 SFT2D2O95562 160 aa13□□□□□ -0.33
FOXN3-204ENST00000553840 PSG1P11464 419 aa13□□□□□ -0.33
FOXN3-204ENST00000553840 RPP30P78346 268 aaKnown RBP13□□□□□ -0.33
FOXN3-204ENST00000553840 TMEM41BQ5BJD5 291 aa13□□□□□ -0.33
FOXN3-204ENST00000553840 MORN3Q6PF18 240 aaPredicted RBP13□□□□□ -0.33
FOXN3-204ENST00000553840 OR51G1Q8NGK1 321 aa13□□□□□ -0.33
FOXN3-204ENST00000553840 OR11H2Q8NH07 326 aa13□□□□□ -0.33
FOXN3-204ENST00000553840 DCANP1Q8TF63 244 aa13□□□□□ -0.33
FOXN3-204ENST00000553840 KLK5Q9Y337 293 aaPredicted RBP13□□□□□ -0.33
FOXN3-204ENST00000553840 PITX3O75364 302 aa12.99□□□□□ -0.33
FOXN3-204ENST00000553840 ZNF688P0C7X2 276 aa12.99□□□□□ -0.33
FOXN3-204ENST00000553840 PPP1R1AQ13522 171 aa12.99□□□□□ -0.33
FOXN3-204ENST00000553840 USF2Q15853 346 aaPredicted RBP12.99□□□□□ -0.33
FOXN3-204ENST00000553840 GLMPQ8WWB7 406 aa12.99□□□□□ -0.33
FOXN3-204ENST00000553840 CIB3Q96Q77 187 aaPredicted RBP12.99□□□□□ -0.33
FOXN3-204ENST00000553840 CCDC32Q9BV29 185 aa12.99□□□□□ -0.33
FOXN3-204ENST00000553840 PAIP2BQ9ULR5 123 aaKnown RBP12.99□□□□□ -0.33
FOXN3-204ENST00000553840 BUB3O43684 328 aa12.98□□□□□ -0.33
FOXN3-204ENST00000553840 SPP1P10451 314 aa12.98□□□□□ -0.33
FOXN3-204ENST00000553840 UBE2MP61081 183 aaKnown RBP12.98□□□□□ -0.33
FOXN3-204ENST00000553840 SNRPD3P62318 126 aaKnown RBP12.98□□□□□ -0.33
FOXN3-204ENST00000553840 EWSR1Q01844 656 aaKnown RBP eCLIP12.98□□□□□ -0.33
FOXN3-204ENST00000553840 GAMTQ14353 236 aa12.98□□□□□ -0.33
FOXN3-204ENST00000553840 ZNF846Q147U1 533 aa12.98□□□□□ -0.33
FOXN3-204ENST00000553840 CEMP1Q6PRD7 247 aaPredicted RBP12.98□□□□□ -0.33
FOXN3-204ENST00000553840 SIGLEC15Q6ZMC9 328 aa12.98□□□□□ -0.33
FOXN3-204ENST00000553840 RNF125Q96EQ8 232 aa12.98□□□□□ -0.33
FOXN3-204ENST00000553840 PBDC1Q9BVG4 233 aa12.98□□□□□ -0.33
FOXN3-204ENST00000553840 WDR12Q9GZL7 423 aaKnown RBP12.98□□□□□ -0.33
FOXN3-204ENST00000553840 STARD9Q9P2P6 4700 aa12.98□□□□□ -0.33
FOXN3-204ENST00000553840 HOXB5P09067 269 aa12.97□□□□□ -0.33
FOXN3-204ENST00000553840 TRPT1Q86TN4 253 aaKnown RBP12.97□□□□□ -0.33
FOXN3-204ENST00000553840 C7orf50Q9BRJ6 194 aaKnown RBP12.97□□□□□ -0.33
FOXN3-204ENST00000553840 MFFQ9GZY8 342 aa12.97□□□□□ -0.33
FOXN3-204ENST00000553840 C11orf68Q9H3H3 251 aaKnown RBP12.97□□□□□ -0.33
FOXN3-204ENST00000553840 SEPSECSQ9HD40 501 aaKnown RBP12.97□□□□□ -0.33
FOXN3-204ENST00000553840 NRN1Q9NPD7 142 aa12.97□□□□□ -0.33
FOXN3-204ENST00000553840 SNRPGP15A8MWD9 76 aa12.96□□□□□ -0.33
FOXN3-204ENST00000553840 SYNGR2O43760 224 aa12.96□□□□□ -0.33
FOXN3-204ENST00000553840 IAPPP10997 89 aa12.96□□□□□ -0.33
FOXN3-204ENST00000553840 PSMG4Q5JS54 123 aa12.96□□□□□ -0.33
FOXN3-204ENST00000553840 ACTL10Q5JWF8 245 aa12.96□□□□□ -0.33
FOXN3-204ENST00000553840 OR8G2PQ6IF36 304 aa12.96□□□□□ -0.33
FOXN3-204ENST00000553840 DYNC2H1Q8NCM8 4307 aaKnown RBP12.95□□□□□ -0.34
FOXN3-204ENST00000553840 AGRNO00468 2067 aa12.95□□□□□ -0.34
FOXN3-204ENST00000553840 KNCNA6PVL3 124 aa12.95□□□□□ -0.34
FOXN3-204ENST00000553840 PLA2G10O15496 165 aa12.95□□□□□ -0.34
FOXN3-204ENST00000553840 LYRM1O43325 122 aa12.95□□□□□ -0.34
FOXN3-204ENST00000553840 C11orf45Q8TAV5 145 aa12.95□□□□□ -0.34
FOXN3-204ENST00000553840 FBXL17Q9UF56 701 aa12.95□□□□□ -0.34
FOXN3-204ENST00000553840 WRBO00258 174 aa12.94□□□□□ -0.34
FOXN3-204ENST00000553840 NDUFB6O95139 128 aa12.94□□□□□ -0.34
FOXN3-204ENST00000553840 NUTF2P61970 127 aaKnown RBP12.94□□□□□ -0.34
FOXN3-204ENST00000553840 ZNF90Q03938 601 aa12.94□□□□□ -0.34
FOXN3-204ENST00000553840 GGNBP1Q5YKI7 109 aa12.94□□□□□ -0.34
FOXN3-204ENST00000553840 COQ8AQ8NI60 647 aa12.94□□□□□ -0.34
FOXN3-204ENST00000553840 PHLDA1Q8WV24 401 aaPredicted RBP12.94□□□□□ -0.34
FOXN3-204ENST00000553840 LINC00476Q8WZB0 136 aa12.94□□□□□ -0.34
FOXN3-204ENST00000553840 PPP1R14BQ96C90 147 aa12.94□□□□□ -0.34
FOXN3-204ENST00000553840 RAB40CQ96S21 281 aa12.94□□□□□ -0.34
FOXN3-204ENST00000553840 TRGV9Q99603 122 aa12.94□□□□□ -0.34
FOXN3-204ENST00000553840 MAGT1Q9H0U3 335 aa12.94□□□□□ -0.34
FOXN3-204ENST00000553840 C9orf170A2RU37 121 aa12.93□□□□□ -0.34
FOXN3-204ENST00000553840 CFDP00746 253 aaPredicted RBP12.93□□□□□ -0.34
FOXN3-204ENST00000553840 IFNA21P01568 189 aa12.93□□□□□ -0.34
FOXN3-204ENST00000553840 BTCP35070 178 aa12.93□□□□□ -0.34
FOXN3-204ENST00000553840 LYZP61626 148 aa12.93□□□□□ -0.34
FOXN3-204ENST00000553840 LYSTQ99698 3801 aa12.93□□□□□ -0.34
FOXN3-204ENST00000553840 C1QTNF4Q9BXJ3 329 aa12.93□□□□□ -0.34
FOXN3-204ENST00000553840 FLVCR2Q9UPI3 526 aa12.93□□□□□ -0.34
FOXN3-204ENST00000553840 IGKV1D-37A0A075B6S9 117 aa12.92□□□□□ -0.34
FOXN3-204ENST00000553840 LY6G6CO95867 125 aa12.92□□□□□ -0.34
FOXN3-204ENST00000553840 S100A7P31151 101 aa12.92□□□□□ -0.34
FOXN3-204ENST00000553840 ID1P41134 155 aa12.92□□□□□ -0.34
FOXN3-204ENST00000553840 SPANXN5Q5MJ07 72 aa12.92□□□□□ -0.34
FOXN3-204ENST00000553840 C1orf194Q5T5A4 169 aa12.92□□□□□ -0.34
FOXN3-204ENST00000553840 STRAPQ9Y3F4 350 aaKnown RBP12.92□□□□□ -0.34
FOXN3-204ENST00000553840 UPK1BO75841 260 aa12.91□□□□□ -0.34
FOXN3-204ENST00000553840 MIFP14174 115 aa12.91□□□□□ -0.34
FOXN3-204ENST00000553840 OR2F1Q13607 317 aa12.91□□□□□ -0.34
FOXN3-204ENST00000553840 THAP8Q8NA92 274 aa12.91□□□□□ -0.34
FOXN3-204ENST00000553840 OR4E1P0C645 316 aa12.9□□□□□ -0.34
FOXN3-204ENST00000553840 NKX2-1P43699 371 aaPredicted RBP12.9□□□□□ -0.34
FOXN3-204ENST00000553840 NANOS2P60321 138 aaKnown RBP12.9□□□□□ -0.34
FOXN3-204ENST00000553840 C4orf46Q504U0 113 aa12.9□□□□□ -0.34
FOXN3-204ENST00000553840 MZT2BQ6NZ67 158 aa12.9□□□□□ -0.34
FOXN3-204ENST00000553840 OR8I2Q8N0Y5 310 aa12.9□□□□□ -0.34
FOXN3-204ENST00000553840 TBC1D24Q9ULP9 559 aa12.9□□□□□ -0.34
FOXN3-204ENST00000553840 DEFB4AO15263 64 aa12.89□□□□□ -0.35
FOXN3-204ENST00000553840 ADAP1O75689 374 aa12.89□□□□□ -0.35
FOXN3-204ENST00000553840 GIG44P09565 113 aaPredicted RBP12.89□□□□□ -0.35
FOXN3-204ENST00000553840 ANXA7P20073 488 aaKnown RBP12.89□□□□□ -0.35
FOXN3-204ENST00000553840 C4BPBP20851 252 aa12.89□□□□□ -0.35
FOXN3-204ENST00000553840 ID3Q02535 119 aa12.89□□□□□ -0.35
FOXN3-204ENST00000553840 AKR1C1Q04828 323 aa12.89□□□□□ -0.35
FOXN3-204ENST00000553840 SAMD13Q5VXD3 122 aa12.89□□□□□ -0.35
FOXN3-204ENST00000553840 BPIFCQ8NFQ6 507 aa12.89□□□□□ -0.35
FOXN3-204ENST00000553840 IGKV1OR2-108A0A075B7D4 117 aa12.88□□□□□ -0.35
FOXN3-204ENST00000553840 FAM240BA0A1B0GVZ2 78 aa12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 134.6 ms