RNA–Protein interactions for RNA: ENST00000553709.5

ARHGEF40-202, Transcript of Rho guanine nucleotide exchange factor 40, humanhuman

TSL 1 (best)

Gene ARHGEF40, Length 5,204 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF40-202ENST00000553709 TMEM50AO95807 157 aa12.62□□□□□ -0.39
ARHGEF40-202ENST00000553709 NUDT10Q8NFP7 164 aa12.62□□□□□ -0.39
ARHGEF40-202ENST00000553709 NUDT11Q96G61 164 aa12.62□□□□□ -0.39
ARHGEF40-202ENST00000553709 DERL1Q9BUN8 251 aa12.62□□□□□ -0.39
ARHGEF40-202ENST00000553709 MLNRO43193 412 aa12.61□□□□□ -0.39
ARHGEF40-202ENST00000553709 SRCAPQ6ZRS2 3230 aa12.61□□□□□ -0.39
ARHGEF40-202ENST00000553709 IGKV3OR2-268A0A0C4DH90 116 aa12.61□□□□□ -0.39
ARHGEF40-202ENST00000553709 SPACA3Q8IXA5 215 aa12.61□□□□□ -0.39
ARHGEF40-202ENST00000553709 PLXNB3Q9ULL4 1909 aa12.61□□□□□ -0.39
ARHGEF40-202ENST00000553709 PSMB11A5LHX3 300 aa12.61□□□□□ -0.39
ARHGEF40-202ENST00000553709 HBDP02042 147 aa12.61□□□□□ -0.39
ARHGEF40-202ENST00000553709 IGHV1-8P0DP01 117 aa12.61□□□□□ -0.39
ARHGEF40-202ENST00000553709 COLCA1Q6ZS62 124 aa12.61□□□□□ -0.39
ARHGEF40-202ENST00000553709 KIF26AQ9ULI4 1882 aaPredicted RBP12.61□□□□□ -0.39
ARHGEF40-202ENST00000553709 PI4KAP42356 2102 aa12.61□□□□□ -0.39
ARHGEF40-202ENST00000553709 NIT1Q86X76 327 aa12.61□□□□□ -0.39
ARHGEF40-202ENST00000553709 FANCMQ8IYD8 2048 aa12.6□□□□□ -0.39
ARHGEF40-202ENST00000553709 A0A0G2JRQ6 117 aa12.6□□□□□ -0.39
ARHGEF40-202ENST00000553709 DOCK9Q9BZ29 2069 aa12.6□□□□□ -0.39
ARHGEF40-202ENST00000553709 DUX3Q96PT4 197 aa12.6□□□□□ -0.39
ARHGEF40-202ENST00000553709 TMEM178BH3BS89 294 aa12.6□□□□□ -0.39
ARHGEF40-202ENST00000553709 TMEM167AQ8TBQ9 72 aa12.6□□□□□ -0.39
ARHGEF40-202ENST00000553709 PPBPP02775 128 aa12.6□□□□□ -0.39
ARHGEF40-202ENST00000553709 OR5AN1Q8NGI8 311 aa12.6□□□□□ -0.39
ARHGEF40-202ENST00000553709 CHCHD1Q96BP2 118 aaKnown RBP12.6□□□□□ -0.39
ARHGEF40-202ENST00000553709 NDUFA3O95167 84 aa12.59□□□□□ -0.39
ARHGEF40-202ENST00000553709 ZNF672Q499Z4 452 aaPredicted RBP12.59□□□□□ -0.39
ARHGEF40-202ENST00000553709 C20orf204Q6ZNR8 217 aa12.59□□□□□ -0.39
ARHGEF40-202ENST00000553709 ETV2O00321 342 aaPredicted RBP12.59□□□□□ -0.39
ARHGEF40-202ENST00000553709 ADCYAP1P18509 176 aa12.59□□□□□ -0.39
ARHGEF40-202ENST00000553709 MRAP2Q96G30 205 aa12.59□□□□□ -0.39
ARHGEF40-202ENST00000553709 PF4P02776 101 aa12.59□□□□□ -0.39
ARHGEF40-202ENST00000553709 NTF4P34130 210 aa12.59□□□□□ -0.39
ARHGEF40-202ENST00000553709 Q6ZRM9 215 aa12.59□□□□□ -0.39
ARHGEF40-202ENST00000553709 SLC25A48Q6ZT89 311 aaKnown RBP12.59□□□□□ -0.39
ARHGEF40-202ENST00000553709 NUP37Q8NFH4 326 aa12.59□□□□□ -0.39
ARHGEF40-202ENST00000553709 ITLN2Q8WWU7 325 aaPredicted RBP12.59□□□□□ -0.39
ARHGEF40-202ENST00000553709 NXT2Q9NPJ8 142 aaKnown RBP12.59□□□□□ -0.39
ARHGEF40-202ENST00000553709 MBNL3Q9NUK0 354 aaKnown RBP12.59□□□□□ -0.39
ARHGEF40-202ENST00000553709 TGFAP01135 160 aa12.58□□□□□ -0.39
ARHGEF40-202ENST00000553709 IGKV1D-17A0A075B6S4 117 aa12.58□□□□□ -0.4
ARHGEF40-202ENST00000553709 NDUFS6O75380 124 aaKnown RBP12.58□□□□□ -0.4
ARHGEF40-202ENST00000553709 PSG1P11464 419 aa12.58□□□□□ -0.4
ARHGEF40-202ENST00000553709 LHFPL4Q7Z7J7 247 aa12.58□□□□□ -0.4
ARHGEF40-202ENST00000553709 SPCS1Q9Y6A9 102 aa12.58□□□□□ -0.4
ARHGEF40-202ENST00000553709 C15orf62A8K5M9 175 aa12.58□□□□□ -0.4
ARHGEF40-202ENST00000553709 SPTBN1Q01082 2364 aaKnown RBP12.58□□□□□ -0.4
ARHGEF40-202ENST00000553709 IGHV1-3A0A0C4DH29 117 aa12.58□□□□□ -0.4
ARHGEF40-202ENST00000553709 TMEM190Q8WZ59 177 aa12.58□□□□□ -0.4
ARHGEF40-202ENST00000553709 ALKBH7Q9BT30 221 aaPredicted RBP12.58□□□□□ -0.4
ARHGEF40-202ENST00000553709 MRPS16Q9Y3D3 137 aaKnown RBP12.58□□□□□ -0.4
ARHGEF40-202ENST00000553709 TRAV21A0A0B4J279 112 aa12.57□□□□□ -0.4
ARHGEF40-202ENST00000553709 MYOD1P15172 320 aa12.57□□□□□ -0.4
ARHGEF40-202ENST00000553709 GLMPQ8WWB7 406 aa12.57□□□□□ -0.4
ARHGEF40-202ENST00000553709 GAFA1Q96PS6 74 aa12.57□□□□□ -0.4
ARHGEF40-202ENST00000553709 PMS2P5A8MQ11 134 aa12.57□□□□□ -0.4
ARHGEF40-202ENST00000553709 H0YJW9 148 aa12.57□□□□□ -0.4
ARHGEF40-202ENST00000553709 TRGV9Q99603 122 aa12.57□□□□□ -0.4
ARHGEF40-202ENST00000553709 C2orf88Q9BSF0 95 aa12.57□□□□□ -0.4
ARHGEF40-202ENST00000553709 PHF3Q92576 2039 aaKnown RBP12.57□□□□□ -0.4
ARHGEF40-202ENST00000553709 MBD3L4A6NDZ8 208 aaPredicted RBP12.57□□□□□ -0.4
ARHGEF40-202ENST00000553709 MBD3L3A6NE82 208 aaPredicted RBP12.57□□□□□ -0.4
ARHGEF40-202ENST00000553709 MBD3L5A6NJ08 208 aaPredicted RBP12.57□□□□□ -0.4
ARHGEF40-202ENST00000553709 IGHG3P01860 377 aa12.57□□□□□ -0.4
ARHGEF40-202ENST00000553709 TTC32Q5I0X7 151 aa12.57□□□□□ -0.4
ARHGEF40-202ENST00000553709 MBD3L2Q8NHZ7 208 aaPredicted RBP12.57□□□□□ -0.4
ARHGEF40-202ENST00000553709 FBLN7Q53RD9 439 aa12.57□□□□□ -0.4
ARHGEF40-202ENST00000553709 MTURNQ8N3F0 131 aa12.57□□□□□ -0.4
ARHGEF40-202ENST00000553709 OR4X2Q8NGF9 303 aa12.57□□□□□ -0.4
ARHGEF40-202ENST00000553709 TMEM101Q96IK0 257 aa12.57□□□□□ -0.4
ARHGEF40-202ENST00000553709 LY96Q9Y6Y9 160 aa12.57□□□□□ -0.4
ARHGEF40-202ENST00000553709 INTS1Q8N201 2190 aaKnown RBP12.57□□□□□ -0.4
ARHGEF40-202ENST00000553709 A0A1B0GWJ7 208 aa12.56□□□□□ -0.4
ARHGEF40-202ENST00000553709 CD7P09564 240 aa12.56□□□□□ -0.4
ARHGEF40-202ENST00000553709 PPIFP30405 207 aaKnown RBP12.56□□□□□ -0.4
ARHGEF40-202ENST00000553709 LINC00205P59089 165 aa12.56□□□□□ -0.4
ARHGEF40-202ENST00000553709 ACTL10Q5JWF8 245 aa12.56□□□□□ -0.4
ARHGEF40-202ENST00000553709 SLC25A39Q9BZJ4 359 aaPredicted RBP12.56□□□□□ -0.4
ARHGEF40-202ENST00000553709 SRSF1Q07955 248 aaKnown RBP eCLIP12.56□□□□□ -0.41e-6■■■■□ 20.3
ARHGEF40-202ENST00000553709 SCRT1Q9BWW7 348 aa12.56□□□□□ -0.4
ARHGEF40-202ENST00000553709 CACNG7P62955 275 aa12.56□□□□□ -0.4
ARHGEF40-202ENST00000553709 RNF5Q99942 180 aa12.56□□□□□ -0.4
ARHGEF40-202ENST00000553709 ST20Q9HBF5 79 aa12.56□□□□□ -0.4
ARHGEF40-202ENST00000553709 HS3ST6Q96QI5 342 aa12.56□□□□□ -0.4
ARHGEF40-202ENST00000553709 ROS1P08922 2347 aa12.56□□□□□ -0.4
ARHGEF40-202ENST00000553709 A0A1B0GWB2 263 aa12.55□□□□□ -0.4
ARHGEF40-202ENST00000553709 F2Z2F3 143 aa12.55□□□□□ -0.4
ARHGEF40-202ENST00000553709 TCRAP04437 139 aa12.55□□□□□ -0.4
ARHGEF40-202ENST00000553709 C5orf30Q96GV9 206 aa12.55□□□□□ -0.4
ARHGEF40-202ENST00000553709 LY6G6EA0A0G2JKS1 128 aa12.55□□□□□ -0.4
ARHGEF40-202ENST00000553709 SCGB1A1P11684 91 aa12.55□□□□□ -0.4
ARHGEF40-202ENST00000553709 MST1LQ2TV78 715 aa12.55□□□□□ -0.4
ARHGEF40-202ENST00000553709 RASL11AQ6T310 242 aa12.55□□□□□ -0.4
ARHGEF40-202ENST00000553709 EXOC3-AS1Q8N2X6 119 aa12.55□□□□□ -0.4
ARHGEF40-202ENST00000553709 C1orf147Q96MC9 270 aaPredicted RBP12.55□□□□□ -0.4
ARHGEF40-202ENST00000553709 LINC01587Q99440 93 aa12.55□□□□□ -0.4
ARHGEF40-202ENST00000553709 U3KQA8 63 aa12.55□□□□□ -0.4
ARHGEF40-202ENST00000553709 NPIPB5A8MRT5 1133 aa12.55□□□□□ -0.4
ARHGEF40-202ENST00000553709 H3BUT2 72 aa12.55□□□□□ -0.4
ARHGEF40-202ENST00000553709 TNFSF13O75888 250 aa12.55□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 65.7 ms