RNA–Protein interactions for RNA: ENST00000553287.5

ATXN3-217, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 726 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-217ENST00000553287 IFNA17P01571 189 aa2.5□□□□□ -2.01
ATXN3-217ENST00000553287 IGKV1-17P01599 117 aa2.5□□□□□ -2.01
ATXN3-217ENST00000553287 RPSAP08865 295 aaKnown RBP2.5□□□□□ -2.01
ATXN3-217ENST00000553287 POLR2IP36954 125 aaKnown RBP2.5□□□□□ -2.01
ATXN3-217ENST00000553287 DAPP51397 102 aa2.5□□□□□ -2.01
ATXN3-217ENST00000553287 CRISP1P54107 249 aa2.5□□□□□ -2.01
ATXN3-217ENST00000553287 EMP1P54849 157 aa2.5□□□□□ -2.01
ATXN3-217ENST00000553287 TCTAP57738 103 aa2.5□□□□□ -2.01
ATXN3-217ENST00000553287 ACTR3P61158 418 aa2.5□□□□□ -2.01
ATXN3-217ENST00000553287 C6orf183Q5T699 404 aa2.5□□□□□ -2.01
ATXN3-217ENST00000553287 TMEM244Q5VVB8 128 aa2.5□□□□□ -2.01
ATXN3-217ENST00000553287 SLC38A6Q8IZM9 456 aa2.5□□□□□ -2.01
ATXN3-217ENST00000553287 VKORC1L1Q8N0U8 176 aa2.5□□□□□ -2.01
ATXN3-217ENST00000553287 STX19Q8N4C7 294 aa2.5□□□□□ -2.01
ATXN3-217ENST00000553287 TSEN15Q8WW01 171 aaKnown RBP2.5□□□□□ -2.01
ATXN3-217ENST00000553287 C10orf35Q96D05 121 aa2.5□□□□□ -2.01
ATXN3-217ENST00000553287 GALNT14Q96FL9 552 aa2.5□□□□□ -2.01
ATXN3-217ENST00000553287 YPEL2Q96QA6 119 aa2.5□□□□□ -2.01
ATXN3-217ENST00000553287 METTL9Q9H1A3 318 aa2.5□□□□□ -2.01
ATXN3-217ENST00000553287 SLC35D1Q9NTN3 355 aa2.5□□□□□ -2.01
ATXN3-217ENST00000553287 RRP15Q9Y3B9 282 aaKnown RBP2.5□□□□□ -2.01
ATXN3-217ENST00000553287 LRP1Q07954 4544 aaKnown RBP2.49□□□□□ -2.01
ATXN3-217ENST00000553287 IGHV3-66A0A0C4DH42 116 aa2.49□□□□□ -2.01
ATXN3-217ENST00000553287 FAM223BA6NKX1 122 aa2.49□□□□□ -2.01
ATXN3-217ENST00000553287 KNCNA6PVL3 124 aa2.49□□□□□ -2.01
ATXN3-217ENST00000553287 J3QRK9 145 aa2.49□□□□□ -2.01
ATXN3-217ENST00000553287 M0R1X1 148 aa2.49□□□□□ -2.01
ATXN3-217ENST00000553287 GNGT2O14610 69 aa2.49□□□□□ -2.01
ATXN3-217ENST00000553287 RAB29O14966 203 aa2.49□□□□□ -2.01
ATXN3-217ENST00000553287 CD74P04233 296 aa2.49□□□□□ -2.01
ATXN3-217ENST00000553287 ISG15P05161 165 aa2.49□□□□□ -2.01
ATXN3-217ENST00000553287 HTR1AP08908 422 aa2.49□□□□□ -2.01
ATXN3-217ENST00000553287 SCTP09683 121 aa2.49□□□□□ -2.01
ATXN3-217ENST00000553287 RAB3AP20336 220 aa2.49□□□□□ -2.01
ATXN3-217ENST00000553287 FGF9P31371 208 aaPredicted RBP2.49□□□□□ -2.01
ATXN3-217ENST00000553287 CEACAM6P40199 344 aa2.49□□□□□ -2.01
ATXN3-217ENST00000553287 LEPP41159 167 aa2.49□□□□□ -2.01
ATXN3-217ENST00000553287 KCNJ3P48549 501 aa2.49□□□□□ -2.01
ATXN3-217ENST00000553287 GTF2A1P52655 376 aaPredicted RBP2.49□□□□□ -2.01
ATXN3-217ENST00000553287 TRIM16LQ309B1 348 aa2.49□□□□□ -2.01
ATXN3-217ENST00000553287 Q3ZCU0 254 aa2.49□□□□□ -2.01
ATXN3-217ENST00000553287 SOHLH1Q5JUK2 328 aa2.49□□□□□ -2.01
ATXN3-217ENST00000553287 OR10K2Q6IF99 312 aa2.49□□□□□ -2.01
ATXN3-217ENST00000553287 ASCL4Q6XD76 172 aa2.49□□□□□ -2.01
ATXN3-217ENST00000553287 SSX9Q7RTT3 188 aa2.49□□□□□ -2.01
ATXN3-217ENST00000553287 C6orf201Q7Z4U5 140 aa2.49□□□□□ -2.01
ATXN3-217ENST00000553287 CROCCP2Q86T23 111 aa2.49□□□□□ -2.01
ATXN3-217ENST00000553287 LHFPL3Q86UP9 236 aa2.49□□□□□ -2.01
ATXN3-217ENST00000553287 GPHB5Q86YW7 130 aa2.49□□□□□ -2.01
ATXN3-217ENST00000553287 FAM223AQ8IWN6 122 aa2.49□□□□□ -2.01
ATXN3-217ENST00000553287 DEFB107AQ8IZN7 70 aa2.49□□□□□ -2.01
ATXN3-217ENST00000553287 PXT1Q8NFP0 134 aa2.49□□□□□ -2.01
ATXN3-217ENST00000553287 GALMQ96C23 342 aa2.49□□□□□ -2.01
ATXN3-217ENST00000553287 PELI1Q96FA3 418 aa2.49□□□□□ -2.01
ATXN3-217ENST00000553287 C4orf36Q96KX1 117 aa2.49□□□□□ -2.01
ATXN3-217ENST00000553287 RNF2Q99496 336 aa2.49□□□□□ -2.01
ATXN3-217ENST00000553287 TSNAXQ99598 290 aaKnown RBP2.49□□□□□ -2.01
ATXN3-217ENST00000553287 SULT4A1Q9BR01 284 aa2.49□□□□□ -2.01
ATXN3-217ENST00000553287 SIKE1Q9BRV8 207 aa2.49□□□□□ -2.01
ATXN3-217ENST00000553287 AGMATQ9BSE5 352 aa2.49□□□□□ -2.01
ATXN3-217ENST00000553287 FAAP24Q9BTP7 215 aa2.49□□□□□ -2.01
ATXN3-217ENST00000553287 C20orf24Q9BUV8 137 aa2.49□□□□□ -2.01
ATXN3-217ENST00000553287 ZNF430Q9H8G1 570 aaPredicted RBP2.49□□□□□ -2.01
ATXN3-217ENST00000553287 KCNIP1Q9NZI2 227 aa2.49□□□□□ -2.01
ATXN3-217ENST00000553287 ENOPH1Q9UHY7 261 aa2.49□□□□□ -2.01
ATXN3-217ENST00000553287 JPT1Q9UK76 154 aa2.49□□□□□ -2.01
ATXN3-217ENST00000553287 TRAV8-7A0A075B6U6 113 aa2.48□□□□□ -2.01
ATXN3-217ENST00000553287 IGKV1-6A0A0C4DH72 117 aa2.48□□□□□ -2.01
ATXN3-217ENST00000553287 DAPL1A0PJW8 107 aa2.48□□□□□ -2.01
ATXN3-217ENST00000553287 OR2T8A6NH00 312 aa2.48□□□□□ -2.01
ATXN3-217ENST00000553287 A8MWP6 167 aa2.48□□□□□ -2.01
ATXN3-217ENST00000553287 RS1O15537 224 aa2.48□□□□□ -2.01
ATXN3-217ENST00000553287 CRTAPO75718 401 aaPredicted RBP2.48□□□□□ -2.01
ATXN3-217ENST00000553287 SULT1C4O75897 302 aa2.48□□□□□ -2.01
ATXN3-217ENST00000553287 C8orf88P0DMB2 117 aa2.48□□□□□ -2.01
ATXN3-217ENST00000553287 MAS1LP35410 378 aa2.48□□□□□ -2.01
ATXN3-217ENST00000553287 ZNF93P35789 620 aaPredicted RBP2.48□□□□□ -2.01
ATXN3-217ENST00000553287 DEFB131AP59861 70 aa2.48□□□□□ -2.01
ATXN3-217ENST00000553287 HMGN3Q15651 99 aa2.48□□□□□ -2.01
ATXN3-217ENST00000553287 PRSS8Q16651 343 aa2.48□□□□□ -2.01
ATXN3-217ENST00000553287 MPV17LQ2QL34 196 aa2.48□□□□□ -2.01
ATXN3-217ENST00000553287 NXNL2Q5VZ03 156 aa2.48□□□□□ -2.01
ATXN3-217ENST00000553287 C12orf73Q69YU5 71 aa2.48□□□□□ -2.01
ATXN3-217ENST00000553287 XAF1Q6GPH4 301 aa2.48□□□□□ -2.01
ATXN3-217ENST00000553287 GLIPR1L1Q6UWM5 242 aa2.48□□□□□ -2.01
ATXN3-217ENST00000553287 GAPTQ8N292 157 aa2.48□□□□□ -2.01
ATXN3-217ENST00000553287 CYB561D1Q8N8Q1 229 aa2.48□□□□□ -2.01
ATXN3-217ENST00000553287 NECAP1Q8NC96 275 aa2.48□□□□□ -2.01
ATXN3-217ENST00000553287 OR5D14Q8NGL3 314 aa2.48□□□□□ -2.01
ATXN3-217ENST00000553287 CANT1Q8WVQ1 401 aa2.48□□□□□ -2.01
ATXN3-217ENST00000553287 FRZBQ92765 325 aa2.48□□□□□ -2.01
ATXN3-217ENST00000553287 CCDC124Q96CT7 223 aaKnown RBP2.48□□□□□ -2.01
ATXN3-217ENST00000553287 C20orf85Q9H1P6 137 aa2.48□□□□□ -2.01
ATXN3-217ENST00000553287 RHOFQ9HBH0 211 aa2.48□□□□□ -2.01
ATXN3-217ENST00000553287 NUDT15Q9NV35 164 aa2.48□□□□□ -2.01
ATXN3-217ENST00000553287 MRPL27Q9P0M9 148 aaKnown RBP2.48□□□□□ -2.01
ATXN3-217ENST00000553287 PIPOXQ9P0Z9 390 aa2.48□□□□□ -2.01
ATXN3-217ENST00000553287 RPL36Q9Y3U8 105 aaKnown RBP2.48□□□□□ -2.01
ATXN3-217ENST00000553287 TRAV25A0A0B4J276 109 aa2.47□□□□□ -2.01
ATXN3-217ENST00000553287 NBDYA0A0U1RRE5 68 aa2.47□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms