RNA–Protein interactions for RNA: ENST00000553278.1

SCFD1-208, Transcript of sec1 family domain containing 1, humanhuman

TSL 2

Gene SCFD1, Length 795 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-208ENST00000553278 IGKV4-1P06312 121 aa2.91□□□□□ -1.94
SCFD1-208ENST00000553278 INSL3P51460 131 aa2.91□□□□□ -1.94
SCFD1-208ENST00000553278 AQP4P55087 323 aa2.91□□□□□ -1.94
SCFD1-208ENST00000553278 PLCXD2Q0VAA5 305 aa2.91□□□□□ -1.94
SCFD1-208ENST00000553278 OR2T10Q8NGZ9 312 aa2.91□□□□□ -1.94
SCFD1-208ENST00000553278 PRADC1Q9BSG0 188 aa2.91□□□□□ -1.94
SCFD1-208ENST00000553278 ASB4Q9Y574 426 aa2.91□□□□□ -1.94
SCFD1-208ENST00000553278 PTPRBP23467 1997 aa2.91□□□□□ -1.94
SCFD1-208ENST00000553278 DOCK4Q8N1I0 1966 aa2.91□□□□□ -1.94
SCFD1-208ENST00000553278 OBSL1O75147 1896 aa2.9□□□□□ -1.94
SCFD1-208ENST00000553278 KIF24Q5T7B8 1368 aa2.9□□□□□ -1.94
SCFD1-208ENST00000553278 TRGV4A0A0C4DH28 118 aa2.9□□□□□ -1.95
SCFD1-208ENST00000553278 ARL5CA6NH57 179 aa2.9□□□□□ -1.95
SCFD1-208ENST00000553278 LY6LH3BQJ8 138 aa2.9□□□□□ -1.95
SCFD1-208ENST00000553278 NDUFB3O43676 98 aa2.9□□□□□ -1.95
SCFD1-208ENST00000553278 PGLYRP1O75594 196 aaPredicted RBP2.9□□□□□ -1.95
SCFD1-208ENST00000553278 PMP2P02689 132 aa2.9□□□□□ -1.95
SCFD1-208ENST00000553278 LGALS3P17931 250 aaKnown RBP2.9□□□□□ -1.95
SCFD1-208ENST00000553278 DYNLT3P51808 116 aa2.9□□□□□ -1.95
SCFD1-208ENST00000553278 MYL5Q02045 173 aa2.9□□□□□ -1.95
SCFD1-208ENST00000553278 SLC38A11Q08AI6 406 aa2.9□□□□□ -1.95
SCFD1-208ENST00000553278 C1orf140Q5VVS0 124 aa2.9□□□□□ -1.95
SCFD1-208ENST00000553278 AQP3Q92482 292 aa2.9□□□□□ -1.95
SCFD1-208ENST00000553278 HSPB9Q9BQS6 159 aa2.9□□□□□ -1.95
SCFD1-208ENST00000553278 TMEM126AQ9H061 195 aa2.9□□□□□ -1.95
SCFD1-208ENST00000553278 A0A0G2JQZ4 141 aa2.89□□□□□ -1.95
SCFD1-208ENST00000553278 RHOGP84095 191 aa2.89□□□□□ -1.95
SCFD1-208ENST00000553278 ZNF345Q14585 488 aa2.89□□□□□ -1.95
SCFD1-208ENST00000553278 NNATQ16517 81 aa2.89□□□□□ -1.95
SCFD1-208ENST00000553278 Q6ZQT0 140 aa2.89□□□□□ -1.95
SCFD1-208ENST00000553278 OR4D11Q8NGI4 311 aa2.89□□□□□ -1.95
SCFD1-208ENST00000553278 BORCS8Q96FH0 119 aa2.89□□□□□ -1.95
SCFD1-208ENST00000553278 CCDC115Q96NT0 180 aa2.89□□□□□ -1.95
SCFD1-208ENST00000553278 YIPF3Q9GZM5 350 aa2.89□□□□□ -1.95
SCFD1-208ENST00000553278 POPDC3Q9HBV1 291 aa2.89□□□□□ -1.95
SCFD1-208ENST00000553278 TECPR2O15040 1411 aa2.88□□□□□ -1.95
SCFD1-208ENST00000553278 IGLV3-9A0A075B6K5 115 aa2.88□□□□□ -1.95
SCFD1-208ENST00000553278 NAPSAO96009 420 aa2.88□□□□□ -1.95
SCFD1-208ENST00000553278 SHBGP04278 402 aa2.88□□□□□ -1.95
SCFD1-208ENST00000553278 BCL2P10415 239 aa2.88□□□□□ -1.95
SCFD1-208ENST00000553278 ZNF181Q2M3W8 571 aa2.88□□□□□ -1.95
SCFD1-208ENST00000553278 EIF5AL1Q6IS14 154 aaKnown RBP2.88□□□□□ -1.95
SCFD1-208ENST00000553278 PDZD9Q8IXQ8 264 aa2.88□□□□□ -1.95
SCFD1-208ENST00000553278 LINC00471Q8N535 108 aa2.88□□□□□ -1.95
SCFD1-208ENST00000553278 SLC30A7Q8NEW0 376 aa2.88□□□□□ -1.95
SCFD1-208ENST00000553278 ADAT1Q9BUB4 502 aaKnown RBP2.88□□□□□ -1.95
SCFD1-208ENST00000553278 TIMM21Q9BVV7 248 aa2.88□□□□□ -1.95
SCFD1-208ENST00000553278 NPCDR1Q9BY65 106 aa2.88□□□□□ -1.95
SCFD1-208ENST00000553278 CXCL16Q9H2A7 254 aa2.88□□□□□ -1.95
SCFD1-208ENST00000553278 ZCCHC6Q5VYS8 1495 aaKnown RBP2.88□□□□□ -1.95
SCFD1-208ENST00000553278 LTBP2Q14767 1821 aa2.88□□□□□ -1.95
SCFD1-208ENST00000553278 CD109Q6YHK3 1445 aa2.87□□□□□ -1.95
SCFD1-208ENST00000553278 TRDV1A0A1B0GX56 115 aa2.87□□□□□ -1.95
SCFD1-208ENST00000553278 ZNF705FA8MVS1 300 aaPredicted RBP2.87□□□□□ -1.95
SCFD1-208ENST00000553278 CTSDP07339 412 aaPredicted RBP2.87□□□□□ -1.95
SCFD1-208ENST00000553278 DYNLT1P63172 113 aa2.87□□□□□ -1.95
SCFD1-208ENST00000553278 SPANXN5Q5MJ07 72 aa2.87□□□□□ -1.95
SCFD1-208ENST00000553278 BRMS1LQ5PSV4 323 aa2.87□□□□□ -1.95
SCFD1-208ENST00000553278 SOSTDC1Q6X4U4 206 aa2.87□□□□□ -1.95
SCFD1-208ENST00000553278 PRR15Q8IV56 129 aa2.87□□□□□ -1.95
SCFD1-208ENST00000553278 ST6GALNAC3Q8NDV1 305 aa2.87□□□□□ -1.95
SCFD1-208ENST00000553278 C6orf62Q9GZU0 229 aaPredicted RBP2.87□□□□□ -1.95
SCFD1-208ENST00000553278 SPANXCQ9NY87 97 aa2.87□□□□□ -1.95
SCFD1-208ENST00000553278 TAS2R4Q9NYW5 299 aa2.87□□□□□ -1.95
SCFD1-208ENST00000553278 RIMBP3CA6NJZ7 1639 aa2.86□□□□□ -1.95
SCFD1-208ENST00000553278 RIMBP3BA6NNM3 1639 aa2.86□□□□□ -1.95
SCFD1-208ENST00000553278 RIMBP3Q9UFD9 1639 aa2.86□□□□□ -1.95
SCFD1-208ENST00000553278 RTEL1-TNFRSF6BF6WH68 1400 aa2.86□□□□□ -1.95
SCFD1-208ENST00000553278 ADGBQ8N7X0 1667 aa2.86□□□□□ -1.95
SCFD1-208ENST00000553278 NCAPD3P42695 1498 aa2.86□□□□□ -1.95
SCFD1-208ENST00000553278 TRAV5A0A0B4J249 113 aa2.86□□□□□ -1.95
SCFD1-208ENST00000553278 CST7O76096 145 aa2.86□□□□□ -1.95
SCFD1-208ENST00000553278 GADD45GO95257 159 aa2.86□□□□□ -1.95
SCFD1-208ENST00000553278 OR10J4P0C629 311 aa2.86□□□□□ -1.95
SCFD1-208ENST00000553278 HLA-EP13747 358 aa2.86□□□□□ -1.95
SCFD1-208ENST00000553278 POLR2HP52434 150 aaKnown RBP2.86□□□□□ -1.95
SCFD1-208ENST00000553278 TMBIM6P55061 237 aa2.86□□□□□ -1.95
SCFD1-208ENST00000553278 S100A12P80511 92 aa2.86□□□□□ -1.95
SCFD1-208ENST00000553278 HES1Q14469 280 aa2.86□□□□□ -1.95
SCFD1-208ENST00000553278 BRD3OSQ6XYD6 125 aa2.86□□□□□ -1.95
SCFD1-208ENST00000553278 ZNF826PQ6ZT77 177 aa2.86□□□□□ -1.95
SCFD1-208ENST00000553278 SLC25A21Q9BQT8 299 aaPredicted RBP2.86□□□□□ -1.95
SCFD1-208ENST00000553278 BCL2L10Q9HD36 194 aa2.86□□□□□ -1.95
SCFD1-208ENST00000553278 IBA57-AS1B1ANH7 110 aa2.85□□□□□ -1.95
SCFD1-208ENST00000553278 H3BRN7 92 aa2.85□□□□□ -1.95
SCFD1-208ENST00000553278 KPNA4O00629 521 aaPredicted RBP2.85□□□□□ -1.95
SCFD1-208ENST00000553278 CXCL1P09341 107 aa2.85□□□□□ -1.95
SCFD1-208ENST00000553278 FKBP2P26885 142 aaKnown RBP2.85□□□□□ -1.95
SCFD1-208ENST00000553278 S100A11P31949 105 aa2.85□□□□□ -1.95
SCFD1-208ENST00000553278 GTF2A1P52655 376 aaPredicted RBP2.85□□□□□ -1.95
SCFD1-208ENST00000553278 TMEM155Q4W5P6 130 aa2.85□□□□□ -1.95
SCFD1-208ENST00000553278 MAFIPQ8WZ33 124 aa2.85□□□□□ -1.95
SCFD1-208ENST00000553278 CARD19Q96LW7 228 aa2.85□□□□□ -1.95
SCFD1-208ENST00000553278 LINC00467Q9BRT7 94 aa2.85□□□□□ -1.95
SCFD1-208ENST00000553278 CST9LQ9H4G1 147 aa2.85□□□□□ -1.95
SCFD1-208ENST00000553278 TAS2R7Q9NYW3 318 aa2.85□□□□□ -1.95
SCFD1-208ENST00000553278 HS3ST2Q9Y278 367 aa2.85□□□□□ -1.95
SCFD1-208ENST00000553278 MED31Q9Y3C7 131 aa2.85□□□□□ -1.95
SCFD1-208ENST00000553278 NUP210LQ5VU65 1888 aa2.85□□□□□ -1.95
SCFD1-208ENST00000553278 ADAMTS7Q9UKP4 1686 aa2.85□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms