RNA–Protein interactions for RNA: ENST00000552620.1

CHMP4A-210, Transcript of charged multivesicular body protein 4A, humanhuman

TSL 2

Gene CHMP4A, Length 716 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4A-210ENST00000552620 SNHG12Q9BXW3 62 aa4.81□□□□□ -1.64
CHMP4A-210ENST00000552620 ZNF331Q9NQX6 463 aaPredicted RBP4.81□□□□□ -1.64
CHMP4A-210ENST00000552620 MRPL27Q9P0M9 148 aaKnown RBP4.81□□□□□ -1.64
CHMP4A-210ENST00000552620 PPIAL4AQ9Y536 164 aa4.81□□□□□ -1.64
CHMP4A-210ENST00000552620 INTS1Q8N201 2190 aaKnown RBP4.8□□□□□ -1.64
CHMP4A-210ENST00000552620 SPAARA0A1B0GVQ0 90 aa4.8□□□□□ -1.64
CHMP4A-210ENST00000552620 A0A1W2PS18 150 aa4.8□□□□□ -1.64
CHMP4A-210ENST00000552620 C16orf97H3BN30 126 aa4.8□□□□□ -1.64
CHMP4A-210ENST00000552620 PEX7O00628 323 aa4.8□□□□□ -1.64
CHMP4A-210ENST00000552620 NDUFB3O43676 98 aa4.8□□□□□ -1.64
CHMP4A-210ENST00000552620 ZNF253O75346 499 aa4.8□□□□□ -1.64
CHMP4A-210ENST00000552620 APCSP02743 223 aa4.8□□□□□ -1.64
CHMP4A-210ENST00000552620 IGKV1-16P04430 117 aa4.8□□□□□ -1.64
CHMP4A-210ENST00000552620 CLEC3BP05452 202 aa4.8□□□□□ -1.64
CHMP4A-210ENST00000552620 CRYGCP07315 174 aa4.8□□□□□ -1.64
CHMP4A-210ENST00000552620 HIST1H1EP10412 219 aaKnown RBP4.8□□□□□ -1.64
CHMP4A-210ENST00000552620 MGST1P10620 155 aaKnown RBP4.8□□□□□ -1.64
CHMP4A-210ENST00000552620 TDGF1P3P51864 188 aa4.8□□□□□ -1.64
CHMP4A-210ENST00000552620 ZNF137PP52743 207 aa4.8□□□□□ -1.64
CHMP4A-210ENST00000552620 PRRX1P54821 245 aa4.8□□□□□ -1.64
CHMP4A-210ENST00000552620 UBE2L3P68036 154 aaKnown RBP4.8□□□□□ -1.64
CHMP4A-210ENST00000552620 FAM27E3Q08E93 113 aa4.8□□□□□ -1.64
CHMP4A-210ENST00000552620 KLF5Q13887 457 aaPredicted RBP4.8□□□□□ -1.64
CHMP4A-210ENST00000552620 LRRC10Q5BKY1 277 aa4.8□□□□□ -1.64
CHMP4A-210ENST00000552620 DUX4L9Q6RFH8 374 aaPredicted RBP4.8□□□□□ -1.64
CHMP4A-210ENST00000552620 ZNF705AQ6ZN79 300 aaPredicted RBP4.8□□□□□ -1.64
CHMP4A-210ENST00000552620 ATP5L2Q7Z4Y8 100 aa4.8□□□□□ -1.64
CHMP4A-210ENST00000552620 ZCCHC24Q8N2G6 241 aaKnown RBP4.8□□□□□ -1.64
CHMP4A-210ENST00000552620 RBMXL3Q8N7X1 1067 aaKnown RBP4.8□□□□□ -1.64
CHMP4A-210ENST00000552620 TEX45Q8NA69 505 aa4.8□□□□□ -1.64
CHMP4A-210ENST00000552620 OR4B1Q8NGF8 309 aa4.8□□□□□ -1.64
CHMP4A-210ENST00000552620 OR10X1Q8NGY0 326 aa4.8□□□□□ -1.64
CHMP4A-210ENST00000552620 C22orf15Q8WYQ4 148 aa4.8□□□□□ -1.64
CHMP4A-210ENST00000552620 TNFRSF14Q92956 283 aa4.8□□□□□ -1.64
CHMP4A-210ENST00000552620 ST6GALNAC6Q969X2 333 aa4.8□□□□□ -1.64
CHMP4A-210ENST00000552620 PERPQ96FX8 193 aa4.8□□□□□ -1.64
CHMP4A-210ENST00000552620 WFIKKN1Q96NZ8 548 aa4.8□□□□□ -1.64
CHMP4A-210ENST00000552620 TRGV9Q99603 122 aa4.8□□□□□ -1.64
CHMP4A-210ENST00000552620 VAMP8Q9BV40 100 aa4.8□□□□□ -1.64
CHMP4A-210ENST00000552620 SLC25A2Q9BXI2 301 aa4.8□□□□□ -1.64
CHMP4A-210ENST00000552620 MRPL20Q9BYC9 149 aaKnown RBP4.8□□□□□ -1.64
CHMP4A-210ENST00000552620 KRTAP4-2Q9BYR5 136 aa4.8□□□□□ -1.64
CHMP4A-210ENST00000552620 RNASE7Q9H1E1 156 aaKnown RBP4.8□□□□□ -1.64
CHMP4A-210ENST00000552620 GNB4Q9HAV0 340 aa4.8□□□□□ -1.64
CHMP4A-210ENST00000552620 NRN1Q9NPD7 142 aa4.8□□□□□ -1.64
CHMP4A-210ENST00000552620 KAAG1Q9UBP8 84 aa4.8□□□□□ -1.64
CHMP4A-210ENST00000552620 WASHC3Q9Y3C0 194 aa4.8□□□□□ -1.64
CHMP4A-210ENST00000552620 AMMECR1Q9Y4X0 333 aaPredicted RBP4.8□□□□□ -1.64
CHMP4A-210ENST00000552620 ZDBF2Q9HCK1 2354 aa4.79□□□□□ -1.64
CHMP4A-210ENST00000552620 DSCAML1Q8TD84 2053 aa4.79□□□□□ -1.64
CHMP4A-210ENST00000552620 SPEGQ15772 3267 aa4.79□□□□□ -1.64
CHMP4A-210ENST00000552620 DSCAMO60469 2012 aa4.79□□□□□ -1.64
CHMP4A-210ENST00000552620 VCANP13611 3396 aa4.79□□□□□ -1.64
CHMP4A-210ENST00000552620 TANC2Q9HCD6 1990 aa4.79□□□□□ -1.64
CHMP4A-210ENST00000552620 A0A1B0GUS0 222 aa4.79□□□□□ -1.64
CHMP4A-210ENST00000552620 C20orf202A1L168 122 aa4.79□□□□□ -1.64
CHMP4A-210ENST00000552620 TMEM178BH3BS89 294 aa4.79□□□□□ -1.64
CHMP4A-210ENST00000552620 CORTO00230 105 aa4.79□□□□□ -1.64
CHMP4A-210ENST00000552620 BMPR1BO00238 502 aa4.79□□□□□ -1.64
CHMP4A-210ENST00000552620 ZNF324O75467 553 aaPredicted RBP4.79□□□□□ -1.64
CHMP4A-210ENST00000552620 OR2J3O76001 311 aa4.79□□□□□ -1.64
CHMP4A-210ENST00000552620 IGLV2-23P01705 113 aa4.79□□□□□ -1.64
CHMP4A-210ENST00000552620 GATA2P23769 480 aaPredicted RBP4.79□□□□□ -1.64
CHMP4A-210ENST00000552620 CHRNB4P30926 498 aa4.79□□□□□ -1.64
CHMP4A-210ENST00000552620 CA7P43166 264 aa4.79□□□□□ -1.64
CHMP4A-210ENST00000552620 AMTP48728 403 aa4.79□□□□□ -1.64
CHMP4A-210ENST00000552620 PLP1P60201 277 aa4.79□□□□□ -1.64
CHMP4A-210ENST00000552620 GAGE1Q13065 139 aa4.79□□□□□ -1.64
CHMP4A-210ENST00000552620 SUMO4Q6EEV6 95 aa4.79□□□□□ -1.64
CHMP4A-210ENST00000552620 PATE2Q6UY27 113 aa4.79□□□□□ -1.64
CHMP4A-210ENST00000552620 MOB3BQ86TA1 216 aa4.79□□□□□ -1.64
CHMP4A-210ENST00000552620 ZNF329Q86UD4 541 aa4.79□□□□□ -1.64
CHMP4A-210ENST00000552620 DOLPP1Q86YN1 238 aa4.79□□□□□ -1.64
CHMP4A-210ENST00000552620 KLHDC1Q8N7A1 406 aa4.79□□□□□ -1.64
CHMP4A-210ENST00000552620 OR10W1Q8NGF6 305 aa4.79□□□□□ -1.64
CHMP4A-210ENST00000552620 OR2T6Q8NHC8 308 aa4.79□□□□□ -1.64
CHMP4A-210ENST00000552620 VN1R17PQ8TDU5 208 aa4.79□□□□□ -1.64
CHMP4A-210ENST00000552620 TSKUQ8WUA8 353 aa4.79□□□□□ -1.64
CHMP4A-210ENST00000552620 NEU4Q8WWR8 484 aaPredicted RBP4.79□□□□□ -1.64
CHMP4A-210ENST00000552620 BORCS7Q96B45 105 aa4.79□□□□□ -1.64
CHMP4A-210ENST00000552620 FXYD5Q96DB9 178 aa4.79□□□□□ -1.64
CHMP4A-210ENST00000552620 FAM122AQ96E09 287 aa4.79□□□□□ -1.64
CHMP4A-210ENST00000552620 KCNS1Q96KK3 526 aa4.79□□□□□ -1.64
CHMP4A-210ENST00000552620 NGBQ9NPG2 151 aa4.79□□□□□ -1.64
CHMP4A-210ENST00000552620 ZNF355PQ9NSJ1 428 aa4.79□□□□□ -1.64
CHMP4A-210ENST00000552620 CBLN4Q9NTU7 201 aa4.79□□□□□ -1.64
CHMP4A-210ENST00000552620 KLF12Q9Y4X4 402 aa4.79□□□□□ -1.64
CHMP4A-210ENST00000552620 SOX21Q9Y651 276 aaPredicted RBP4.79□□□□□ -1.64
CHMP4A-210ENST00000552620 DYSFO75923 2080 aa4.78□□□□□ -1.64
CHMP4A-210ENST00000552620 IGKV1D-37A0A075B6S9 117 aa4.78□□□□□ -1.64
CHMP4A-210ENST00000552620 TRAV5A0A0B4J249 113 aa4.78□□□□□ -1.64
CHMP4A-210ENST00000552620 FAM231BA6NCW3 169 aa4.78□□□□□ -1.64
CHMP4A-210ENST00000552620 DPRXA6NFQ7 191 aa4.78□□□□□ -1.64
CHMP4A-210ENST00000552620 CGB1A6NKQ9 187 aa4.78□□□□□ -1.64
CHMP4A-210ENST00000552620 FSTL3O95633 263 aa4.78□□□□□ -1.64
CHMP4A-210ENST00000552620 CCL3L1P16619 93 aa4.78□□□□□ -1.64
CHMP4A-210ENST00000552620 MYCNOSP40205 109 aa4.78□□□□□ -1.64
CHMP4A-210ENST00000552620 DLX6P56179 175 aa4.78□□□□□ -1.64
CHMP4A-210ENST00000552620 CCL8P80075 99 aa4.78□□□□□ -1.64
CHMP4A-210ENST00000552620 WT1-ASQ06250 92 aa4.78□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms