RNA–Protein interactions for RNA: ENST00000549578.5

VPS29-206, Transcript of VPS29, retromer complex component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS29, Length 1,523 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS29-206ENST00000549578 IL4P05112 153 aa16.13■□□□□ 0.17
VPS29-206ENST00000549578 BTNL8Q6UX41 500 aa16.13■□□□□ 0.17
VPS29-206ENST00000549578 CYP2G1PQ6ZSU1 146 aa16.13■□□□□ 0.17
VPS29-206ENST00000549578 WFDC1Q9HC57 220 aa16.13■□□□□ 0.17
VPS29-206ENST00000549578 UFC1Q9Y3C8 167 aa16.13■□□□□ 0.17
VPS29-206ENST00000549578 C2orf70A6NJV1 201 aa16.12■□□□□ 0.17
VPS29-206ENST00000549578 AGPAT2O15120 278 aa16.12■□□□□ 0.17
VPS29-206ENST00000549578 FABP1P07148 127 aa16.12■□□□□ 0.17
VPS29-206ENST00000549578 CSN3P07498 182 aa16.12■□□□□ 0.17
VPS29-206ENST00000549578 FGF7P21781 194 aa16.12■□□□□ 0.17
VPS29-206ENST00000549578 OR51G1Q8NGK1 321 aa16.12■□□□□ 0.17
VPS29-206ENST00000549578 ELOVL1Q9BW60 279 aa16.12■□□□□ 0.17
VPS29-206ENST00000549578 MFFQ9GZY8 342 aa16.12■□□□□ 0.17
VPS29-206ENST00000549578 DAZ1Q9NQZ3 744 aaKnown RBP16.12■□□□□ 0.17
VPS29-206ENST00000549578 SAP30O75446 220 aa16.11■□□□□ 0.17
VPS29-206ENST00000549578 DFFBO76075 338 aa16.11■□□□□ 0.17
VPS29-206ENST00000549578 ADAMTSL5Q6ZMM2 481 aa16.11■□□□□ 0.17
VPS29-206ENST00000549578 NEURL2Q9BR09 285 aa16.11■□□□□ 0.17
VPS29-206ENST00000549578 CAMLGP49069 296 aa16.1■□□□□ 0.17
VPS29-206ENST00000549578 ELLP55199 621 aaPredicted RBP16.1■□□□□ 0.17
VPS29-206ENST00000549578 USF2Q15853 346 aaPredicted RBP16.1■□□□□ 0.17
VPS29-206ENST00000549578 GINS3Q9BRX5 216 aa16.1■□□□□ 0.17
VPS29-206ENST00000549578 MCRIP2Q9BUT9 160 aaKnown RBP16.1■□□□□ 0.17
VPS29-206ENST00000549578 PBDC1Q9BVG4 233 aa16.1■□□□□ 0.17
VPS29-206ENST00000549578 GGTLC1Q9BX51 225 aa16.1■□□□□ 0.17
VPS29-206ENST00000549578 MGAM2Q2M2H8 2515 aa16.1■□□□□ 0.17
VPS29-206ENST00000549578 IGHV3-49A0A0A0MS15 119 aa16.09■□□□□ 0.17
VPS29-206ENST00000549578 WI2-2373I1.2A0A1W2PRP0 233 aa16.09■□□□□ 0.17
VPS29-206ENST00000549578 HMSDA8MTL9 139 aa16.09■□□□□ 0.17
VPS29-206ENST00000549578 K7EMT4 169 aa16.09■□□□□ 0.17
VPS29-206ENST00000549578 FOLR2P14207 255 aa16.09■□□□□ 0.17
VPS29-206ENST00000549578 CBLN1P23435 193 aa16.09■□□□□ 0.17
VPS29-206ENST00000549578 LYZP61626 148 aa16.09■□□□□ 0.17
VPS29-206ENST00000549578 BPIFCQ8NFQ6 507 aa16.09■□□□□ 0.17
VPS29-206ENST00000549578 RNF125Q96EQ8 232 aa16.09■□□□□ 0.17
VPS29-206ENST00000549578 WDR61Q9GZS3 305 aaKnown RBP16.09■□□□□ 0.17
VPS29-206ENST00000549578 SLC45A2Q9UMX9 530 aa16.09■□□□□ 0.17
VPS29-206ENST00000549578 C1QBP02746 253 aa16.09■□□□□ 0.17
VPS29-206ENST00000549578 SELENOTP62341 195 aa16.09■□□□□ 0.17
VPS29-206ENST00000549578 RAB31Q13636 194 aa16.09■□□□□ 0.17
VPS29-206ENST00000549578 OXLD1Q5BKU9 147 aa16.09■□□□□ 0.17
VPS29-206ENST00000549578 SELENOKQ9Y6D0 94 aa16.09■□□□□ 0.17
VPS29-206ENST00000549578 IFNA5P01569 189 aa16.08■□□□□ 0.16
VPS29-206ENST00000549578 LINC00869P0C866 280 aa16.08■□□□□ 0.16
VPS29-206ENST00000549578 C9orf66Q5T8R8 295 aa16.08■□□□□ 0.16
VPS29-206ENST00000549578 METTL26Q96S19 204 aa16.08■□□□□ 0.16
VPS29-206ENST00000549578 NPCDR1Q9BY65 106 aa16.08■□□□□ 0.16
VPS29-206ENST00000549578 IGHV3OR16-13A0A075B7E8 117 aa16.07■□□□□ 0.16
VPS29-206ENST00000549578 IGHV3-74A0A0B4J1X5 117 aa16.07■□□□□ 0.16
VPS29-206ENST00000549578 MPDU1O75352 247 aa16.07■□□□□ 0.16
VPS29-206ENST00000549578 APOHP02749 345 aaPredicted RBP16.07■□□□□ 0.16
VPS29-206ENST00000549578 CXCL2P19875 107 aa16.07■□□□□ 0.16
VPS29-206ENST00000549578 MIC13Q5XKP0 118 aa16.07■□□□□ 0.16
VPS29-206ENST00000549578 MRPL27Q9P0M9 148 aaKnown RBP16.07■□□□□ 0.16
VPS29-206ENST00000549578 IGHV7-4-1A0A0J9YVY3 117 aa16.06■□□□□ 0.16
VPS29-206ENST00000549578 CFDP00746 253 aaPredicted RBP16.06■□□□□ 0.16
VPS29-206ENST00000549578 C8orf88P0DMB2 117 aa16.06■□□□□ 0.16
VPS29-206ENST00000549578 ORM2P19652 201 aa16.06■□□□□ 0.16
VPS29-206ENST00000549578 NPPCP23582 126 aa16.06■□□□□ 0.16
VPS29-206ENST00000549578 EIF2B2P49770 351 aaKnown RBP16.06■□□□□ 0.16
VPS29-206ENST00000549578 ZNF345Q14585 488 aa16.06■□□□□ 0.16
VPS29-206ENST00000549578 OPCMLQ14982 345 aa16.06■□□□□ 0.16
VPS29-206ENST00000549578 STPG3Q8N7X2 389 aa16.06■□□□□ 0.16
VPS29-206ENST00000549578 MARC2Q969Z3 335 aa16.06■□□□□ 0.16
VPS29-206ENST00000549578 SIGLEC8Q9NYZ4 499 aa16.06■□□□□ 0.16
VPS29-206ENST00000549578 DOK5Q9P104 306 aa16.06■□□□□ 0.16
VPS29-206ENST00000549578 IGHV3-66A0A0C4DH42 116 aa16.05■□□□□ 0.16
VPS29-206ENST00000549578 G3V4G9 280 aa16.05■□□□□ 0.16
VPS29-206ENST00000549578 CRYBB3P26998 211 aa16.05■□□□□ 0.16
VPS29-206ENST00000549578 KCNRGQ8N5I3 272 aa16.05■□□□□ 0.16
VPS29-206ENST00000549578 OR1B1Q8NGR6 318 aa16.05■□□□□ 0.16
VPS29-206ENST00000549578 SCGB1C1Q8TD33 95 aa16.05■□□□□ 0.16
VPS29-206ENST00000549578 DYNLRB2Q8TF09 96 aa16.05■□□□□ 0.16
VPS29-206ENST00000549578 RSG1Q9BU20 258 aa16.05■□□□□ 0.16
VPS29-206ENST00000549578 MLXQ9UH92 298 aa16.05■□□□□ 0.16
VPS29-206ENST00000549578 SMPXQ9UHP9 88 aa16.05■□□□□ 0.16
VPS29-206ENST00000549578 RABAC1Q9UI14 185 aa16.05■□□□□ 0.16
VPS29-206ENST00000549578 HNRNPCP07910 306 aaKnown RBP eCLIP16.04■□□□□ 0.16
VPS29-206ENST00000549578 PRR20EP86478 221 aa16.04■□□□□ 0.16
VPS29-206ENST00000549578 PRR20CP86479 221 aa16.04■□□□□ 0.16
VPS29-206ENST00000549578 PRR20DP86480 221 aa16.04■□□□□ 0.16
VPS29-206ENST00000549578 PRR20BP86481 221 aa16.04■□□□□ 0.16
VPS29-206ENST00000549578 PRR20AP86496 221 aa16.04■□□□□ 0.16
VPS29-206ENST00000549578 ZNF266Q14584 549 aa16.04■□□□□ 0.16
VPS29-206ENST00000549578 ZFP69Q49AA0 526 aa16.04■□□□□ 0.16
VPS29-206ENST00000549578 RHPN1-AS1Q9BWJ2 59 aa16.04■□□□□ 0.16
VPS29-206ENST00000549578 ARL6Q9H0F7 186 aa16.04■□□□□ 0.16
VPS29-206ENST00000549578 PXMP4Q9Y6I8 212 aa16.04■□□□□ 0.16
VPS29-206ENST00000549578 RPL29P47914 159 aaKnown RBP16.04■□□□□ 0.16
VPS29-206ENST00000549578 INSL3P51460 131 aa16.04■□□□□ 0.16
VPS29-206ENST00000549578 RPL7L1Q6DKI1 246 aaKnown RBP16.04■□□□□ 0.16
VPS29-206ENST00000549578 ST8SIA2Q92186 375 aa16.04■□□□□ 0.16
VPS29-206ENST00000549578 HYLS1Q96M11 299 aa16.04■□□□□ 0.16
VPS29-206ENST00000549578 PARD6GQ9BYG4 376 aaPredicted RBP16.04■□□□□ 0.16
VPS29-206ENST00000549578 CHEK1O14757 476 aa16.03■□□□□ 0.16
VPS29-206ENST00000549578 IGLV1-51P01701 117 aa16.03■□□□□ 0.16
VPS29-206ENST00000549578 B2MP61769 119 aa16.03■□□□□ 0.16
VPS29-206ENST00000549578 ZNF709Q8N972 641 aa16.03■□□□□ 0.16
VPS29-206ENST00000549578 SLC39A9Q9NUM3 307 aa16.03■□□□□ 0.16
VPS29-206ENST00000549578 RFNGQ9Y644 331 aa16.03■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms