RNA–Protein interactions for RNA: ENST00000549328.1

CHMP1A-207, Transcript of charged multivesicular body protein 1A, humanhuman

TSL 3

Gene CHMP1A, Length 1,003 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-207ENST00000549328 OR11H2Q8NH07 326 aa13.65□□□□□ -0.22
CHMP1A-207ENST00000549328 CIB3Q96Q77 187 aaPredicted RBP13.65□□□□□ -0.22
CHMP1A-207ENST00000549328 SEPSECSQ9HD40 501 aaKnown RBP13.65□□□□□ -0.22
CHMP1A-207ENST00000549328 PFDN2Q9UHV9 154 aa13.65□□□□□ -0.22
CHMP1A-207ENST00000549328 NAP1L6A6NFF2 107 aa13.64□□□□□ -0.23
CHMP1A-207ENST00000549328 ZNF688P0C7X2 276 aa13.64□□□□□ -0.23
CHMP1A-207ENST00000549328 NUP62P37198 522 aaPredicted RBP13.64□□□□□ -0.23
CHMP1A-207ENST00000549328 MORN3Q6PF18 240 aaPredicted RBP13.64□□□□□ -0.23
CHMP1A-207ENST00000549328 TRPT1Q86TN4 253 aaKnown RBP13.64□□□□□ -0.23
CHMP1A-207ENST00000549328 RNF125Q96EQ8 232 aa13.64□□□□□ -0.23
CHMP1A-207ENST00000549328 SLC35E1Q96K37 410 aa13.64□□□□□ -0.23
CHMP1A-207ENST00000549328 ZFP92A6NM28 416 aa13.63□□□□□ -0.23
CHMP1A-207ENST00000549328 FABP1P07148 127 aa13.63□□□□□ -0.23
CHMP1A-207ENST00000549328 SPP1P10451 314 aa13.63□□□□□ -0.23
CHMP1A-207ENST00000549328 OR8G2PQ6IF36 304 aa13.63□□□□□ -0.23
CHMP1A-207ENST00000549328 C11orf68Q9H3H3 251 aaKnown RBP13.63□□□□□ -0.23
CHMP1A-207ENST00000549328 DNAH1Q9P2D7 4330 aa13.62□□□□□ -0.23
CHMP1A-207ENST00000549328 SYNGR2O43760 224 aa13.62□□□□□ -0.23
CHMP1A-207ENST00000549328 INPP1P49441 399 aa13.62□□□□□ -0.23
CHMP1A-207ENST00000549328 SNRPD3P62318 126 aaKnown RBP13.62□□□□□ -0.23
CHMP1A-207ENST00000549328 RPP30P78346 268 aaKnown RBP13.62□□□□□ -0.23
CHMP1A-207ENST00000549328 BAK1Q16611 211 aa13.62□□□□□ -0.23
CHMP1A-207ENST00000549328 SIGLEC15Q6ZMC9 328 aa13.62□□□□□ -0.23
CHMP1A-207ENST00000549328 NRN1Q9NPD7 142 aa13.62□□□□□ -0.23
CHMP1A-207ENST00000549328 KLK5Q9Y337 293 aaPredicted RBP13.62□□□□□ -0.23
CHMP1A-207ENST00000549328 AGRNO00468 2067 aa13.62□□□□□ -0.23
CHMP1A-207ENST00000549328 IGKV1D-37A0A075B6S9 117 aa13.61□□□□□ -0.23
CHMP1A-207ENST00000549328 SNRPGP15A8MWD9 76 aa13.61□□□□□ -0.23
CHMP1A-207ENST00000549328 NDUFB6O95139 128 aa13.61□□□□□ -0.23
CHMP1A-207ENST00000549328 HOXB5P09067 269 aa13.61□□□□□ -0.23
CHMP1A-207ENST00000549328 GIG44P09565 113 aaPredicted RBP13.61□□□□□ -0.23
CHMP1A-207ENST00000549328 IAPPP10997 89 aa13.61□□□□□ -0.23
CHMP1A-207ENST00000549328 ZNF90Q03938 601 aa13.61□□□□□ -0.23
CHMP1A-207ENST00000549328 GGNBP1Q5YKI7 109 aa13.61□□□□□ -0.23
CHMP1A-207ENST00000549328 TRIQKQ629K1 86 aa13.61□□□□□ -0.23
CHMP1A-207ENST00000549328 RAB40CQ96S21 281 aa13.61□□□□□ -0.23
CHMP1A-207ENST00000549328 C9orf170A2RU37 121 aa13.6□□□□□ -0.23
CHMP1A-207ENST00000549328 KNCNA6PVL3 124 aa13.6□□□□□ -0.23
CHMP1A-207ENST00000549328 PSMG4Q5JS54 123 aa13.6□□□□□ -0.23
CHMP1A-207ENST00000549328 ACTL10Q5JWF8 245 aa13.6□□□□□ -0.23
CHMP1A-207ENST00000549328 LINC00476Q8WZB0 136 aa13.6□□□□□ -0.23
CHMP1A-207ENST00000549328 TRGV9Q99603 122 aa13.6□□□□□ -0.23
CHMP1A-207ENST00000549328 PBDC1Q9BVG4 233 aa13.6□□□□□ -0.23
CHMP1A-207ENST00000549328 MFFQ9GZY8 342 aa13.6□□□□□ -0.23
CHMP1A-207ENST00000549328 C1orf194Q5T5A4 169 aa13.59□□□□□ -0.23
CHMP1A-207ENST00000549328 THAP8Q8NA92 274 aa13.59□□□□□ -0.23
CHMP1A-207ENST00000549328 C11orf45Q8TAV5 145 aa13.59□□□□□ -0.23
CHMP1A-207ENST00000549328 PHLDA1Q8WV24 401 aaPredicted RBP13.59□□□□□ -0.23
CHMP1A-207ENST00000549328 MAGT1Q9H0U3 335 aa13.59□□□□□ -0.23
CHMP1A-207ENST00000549328 PAIP2BQ9ULR5 123 aaKnown RBP13.59□□□□□ -0.23
CHMP1A-207ENST00000549328 CENPXA8MT69 81 aa13.58□□□□□ -0.24
CHMP1A-207ENST00000549328 PRSS46E5RG02 174 aa13.58□□□□□ -0.24
CHMP1A-207ENST00000549328 WRBO00258 174 aa13.58□□□□□ -0.24
CHMP1A-207ENST00000549328 CFDP00746 253 aaPredicted RBP13.58□□□□□ -0.24
CHMP1A-207ENST00000549328 ID3Q02535 119 aa13.58□□□□□ -0.24
CHMP1A-207ENST00000549328 SDHCQ99643 169 aaPredicted RBP13.58□□□□□ -0.24
CHMP1A-207ENST00000549328 C7orf50Q9BRJ6 194 aaKnown RBP13.58□□□□□ -0.24
CHMP1A-207ENST00000549328 FBXL17Q9UF56 701 aa13.58□□□□□ -0.24
CHMP1A-207ENST00000549328 IGKV1OR2-108A0A075B7D4 117 aa13.57□□□□□ -0.24
CHMP1A-207ENST00000549328 COQ8AQ8NI60 647 aa13.57□□□□□ -0.24
CHMP1A-207ENST00000549328 NDUFA13Q9P0J0 144 aa13.57□□□□□ -0.24
CHMP1A-207ENST00000549328 ZNF705EA8MWA4 302 aaPredicted RBP13.56□□□□□ -0.24
CHMP1A-207ENST00000549328 ADAP1O75689 374 aa13.56□□□□□ -0.24
CHMP1A-207ENST00000549328 IFNA21P01568 189 aa13.56□□□□□ -0.24
CHMP1A-207ENST00000549328 OR4E1P0C645 316 aa13.56□□□□□ -0.24
CHMP1A-207ENST00000549328 MIFP14174 115 aa13.56□□□□□ -0.24
CHMP1A-207ENST00000549328 C4BPBP20851 252 aa13.56□□□□□ -0.24
CHMP1A-207ENST00000549328 NKX2-1P43699 371 aaPredicted RBP13.56□□□□□ -0.24
CHMP1A-207ENST00000549328 LYZP61626 148 aa13.56□□□□□ -0.24
CHMP1A-207ENST00000549328 NUTF2P61970 127 aaKnown RBP13.56□□□□□ -0.24
CHMP1A-207ENST00000549328 CNPY1Q3B7I2 92 aa13.56□□□□□ -0.24
CHMP1A-207ENST00000549328 SPANXN5Q5MJ07 72 aa13.56□□□□□ -0.24
CHMP1A-207ENST00000549328 Q8NAQ8 132 aa13.56□□□□□ -0.24
CHMP1A-207ENST00000549328 CSNK1G2-AS1Q8NCQ2 148 aa13.56□□□□□ -0.24
CHMP1A-207ENST00000549328 FLVCR2Q9UPI3 526 aa13.56□□□□□ -0.24
CHMP1A-207ENST00000549328 STRAPQ9Y3F4 350 aaKnown RBP13.56□□□□□ -0.24
CHMP1A-207ENST00000549328 H3BMM0 161 aa13.55□□□□□ -0.24
CHMP1A-207ENST00000549328 NANOS2P60321 138 aaKnown RBP13.55□□□□□ -0.24
CHMP1A-207ENST00000549328 OR2F1Q13607 317 aa13.55□□□□□ -0.24
CHMP1A-207ENST00000549328 C1QTNF4Q9BXJ3 329 aa13.55□□□□□ -0.24
CHMP1A-207ENST00000549328 SLC45A2Q9UMX9 530 aa13.55□□□□□ -0.24
CHMP1A-207ENST00000549328 LINC00854A0A1B0GVQ3 168 aa13.54□□□□□ -0.24
CHMP1A-207ENST00000549328 DEFB4AO15263 64 aa13.54□□□□□ -0.24
CHMP1A-207ENST00000549328 LY6G6CO95867 125 aa13.54□□□□□ -0.24
CHMP1A-207ENST00000549328 IL7P13232 177 aa13.54□□□□□ -0.24
CHMP1A-207ENST00000549328 BTCP35070 178 aa13.54□□□□□ -0.24
CHMP1A-207ENST00000549328 ID1P41134 155 aa13.54□□□□□ -0.24
CHMP1A-207ENST00000549328 HRH4Q9H3N8 390 aa13.54□□□□□ -0.24
CHMP1A-207ENST00000549328 HLA-DRB4P13762 266 aa13.53□□□□□ -0.24
CHMP1A-207ENST00000549328 POLR2GP62487 172 aaKnown RBP eCLIP13.53□□□□□ -0.24
CHMP1A-207ENST00000549328 C4orf46Q504U0 113 aa13.53□□□□□ -0.24
CHMP1A-207ENST00000549328 OR8I2Q8N0Y5 310 aa13.53□□□□□ -0.24
CHMP1A-207ENST00000549328 OR4D5Q8NGN0 318 aa13.53□□□□□ -0.24
CHMP1A-207ENST00000549328 PPP1R14BQ96C90 147 aa13.53□□□□□ -0.24
CHMP1A-207ENST00000549328 WDR12Q9GZL7 423 aaKnown RBP13.53□□□□□ -0.24
CHMP1A-207ENST00000549328 HLA-DRB4X5D2U9 266 aa13.53□□□□□ -0.24
CHMP1A-207ENST00000549328 X6R8D5 127 aa13.53□□□□□ -0.24
CHMP1A-207ENST00000549328 PLECQ15149 4684 aaKnown RBP13.53□□□□□ -0.24
CHMP1A-207ENST00000549328 IGHV4-28A0A0C4DH34 117 aa13.52□□□□□ -0.25
CHMP1A-207ENST00000549328 H3BP45 60 aa13.52□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms