RNA–Protein interactions for RNA: ENST00000548522.5

SSH1-208, Transcript of slingshot protein phosphatase 1, humanhuman

TSL 3

Gene SSH1, Length 602 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH1-208ENST00000548522 UBAC2Q8NBM4 344 aa12.09□□□□□ -0.47
SSH1-208ENST00000548522 BSCL2Q96G97 398 aaPredicted RBP12.09□□□□□ -0.47
SSH1-208ENST00000548522 RNF2Q99496 336 aa12.09□□□□□ -0.47
SSH1-208ENST00000548522 THYN1Q9P016 225 aa12.09□□□□□ -0.47
SSH1-208ENST00000548522 FBXL17Q9UF56 701 aa12.09□□□□□ -0.47
SSH1-208ENST00000548522 DYNC1H1Q14204 4646 aaKnown RBP12.08□□□□□ -0.48
SSH1-208ENST00000548522 E5RGE8 158 aa12.08□□□□□ -0.48
SSH1-208ENST00000548522 K7EIM0 57 aa12.08□□□□□ -0.48
SSH1-208ENST00000548522 NDUFA4O00483 81 aa12.08□□□□□ -0.48
SSH1-208ENST00000548522 DEFB4AO15263 64 aa12.08□□□□□ -0.48
SSH1-208ENST00000548522 HPRT1P00492 218 aa12.08□□□□□ -0.48
SSH1-208ENST00000548522 SERPINE2P07093 398 aa12.08□□□□□ -0.48
SSH1-208ENST00000548522 F2RP25116 425 aa12.08□□□□□ -0.48
SSH1-208ENST00000548522 SLC25A24Q6NUK1 477 aa12.08□□□□□ -0.48
SSH1-208ENST00000548522 DMBX1Q8NFW5 382 aa12.08□□□□□ -0.48
SSH1-208ENST00000548522 RBPMSQ93062 196 aaKnown RBP12.08□□□□□ -0.48
SSH1-208ENST00000548522 SRSF8Q9BRL6 282 aaKnown RBP12.08□□□□□ -0.48
SSH1-208ENST00000548522 C21orf62Q9NYP8 219 aa12.08□□□□□ -0.48
SSH1-208ENST00000548522 NSG2Q9Y328 171 aa12.08□□□□□ -0.48
SSH1-208ENST00000548522 DNAH17Q9UFH2 4485 aa12.07□□□□□ -0.48
SSH1-208ENST00000548522 IGKV3-7A0A075B6H7 116 aa12.07□□□□□ -0.48
SSH1-208ENST00000548522 TEX50A0A1B0GTY4 177 aa12.07□□□□□ -0.48
SSH1-208ENST00000548522 MPTX1A8MV57 137 aa12.07□□□□□ -0.48
SSH1-208ENST00000548522 PGLYRP1O75594 196 aaPredicted RBP12.07□□□□□ -0.48
SSH1-208ENST00000548522 NMBP08949 121 aa12.07□□□□□ -0.48
SSH1-208ENST00000548522 TPT1P13693 172 aaKnown RBP12.07□□□□□ -0.48
SSH1-208ENST00000548522 OR4D5Q8NGN0 318 aa12.07□□□□□ -0.48
SSH1-208ENST00000548522 OR1S1Q8NH92 325 aa12.07□□□□□ -0.48
SSH1-208ENST00000548522 TP53RKQ96S44 253 aa12.07□□□□□ -0.48
SSH1-208ENST00000548522 HINT2Q9BX68 163 aa12.07□□□□□ -0.48
SSH1-208ENST00000548522 F11RQ9Y624 299 aaKnown RBP12.07□□□□□ -0.48
SSH1-208ENST00000548522 ST8SIA3O43173 380 aa12.06□□□□□ -0.48
SSH1-208ENST00000548522 P2RY1P47900 373 aa12.06□□□□□ -0.48
SSH1-208ENST00000548522 CATR1Q13166 79 aa12.06□□□□□ -0.48
SSH1-208ENST00000548522 EIF5AL1Q6IS14 154 aaKnown RBP12.06□□□□□ -0.48
SSH1-208ENST00000548522 SELENOHQ8IZQ5 122 aaKnown RBP12.06□□□□□ -0.48
SSH1-208ENST00000548522 EIF4E3Q8N5X7 224 aaKnown RBP12.06□□□□□ -0.48
SSH1-208ENST00000548522 C11orf45Q8TAV5 145 aa12.06□□□□□ -0.48
SSH1-208ENST00000548522 LSM10Q969L4 123 aaKnown RBP12.06□□□□□ -0.48
SSH1-208ENST00000548522 RARRES2Q99969 163 aa12.06□□□□□ -0.48
SSH1-208ENST00000548522 AIFM2Q9BRQ8 373 aa12.06□□□□□ -0.48
SSH1-208ENST00000548522 CSTL1Q9H114 145 aa12.06□□□□□ -0.48
SSH1-208ENST00000548522 NDUFA4L2Q9NRX3 87 aa12.06□□□□□ -0.48
SSH1-208ENST00000548522 SMPXQ9UHP9 88 aa12.06□□□□□ -0.48
SSH1-208ENST00000548522 DNAH11Q96DT5 4516 aa12.06□□□□□ -0.48
SSH1-208ENST00000548522 IGHV3OR16-13A0A075B7E8 117 aa12.05□□□□□ -0.48
SSH1-208ENST00000548522 IGHV3-74A0A0B4J1X5 117 aa12.05□□□□□ -0.48
SSH1-208ENST00000548522 MARCH11A6NNE9 402 aa12.05□□□□□ -0.48
SSH1-208ENST00000548522 Q56UQ5 140 aa12.05□□□□□ -0.48
SSH1-208ENST00000548522 NMSQ5H8A3 153 aa12.05□□□□□ -0.48
SSH1-208ENST00000548522 TMEM268Q5VZI3 342 aa12.05□□□□□ -0.48
SSH1-208ENST00000548522 SPSB3Q6PJ21 355 aa12.05□□□□□ -0.48
SSH1-208ENST00000548522 LYZL2Q7Z4W2 148 aa12.05□□□□□ -0.48
SSH1-208ENST00000548522 SLC35G3Q8N808 338 aa12.05□□□□□ -0.48
SSH1-208ENST00000548522 OR11H2Q8NH07 326 aa12.05□□□□□ -0.48
SSH1-208ENST00000548522 LHFPL5Q8TAF8 219 aa12.05□□□□□ -0.48
SSH1-208ENST00000548522 RHPN1-AS1Q9BWJ2 59 aa12.05□□□□□ -0.48
SSH1-208ENST00000548522 ZNF471Q9BX82 626 aaPredicted RBP12.05□□□□□ -0.48
SSH1-208ENST00000548522 C11orf68Q9H3H3 251 aaKnown RBP12.05□□□□□ -0.48
SSH1-208ENST00000548522 PRR13Q9NZ81 148 aa12.05□□□□□ -0.48
SSH1-208ENST00000548522 OR5AC2Q9NZP5 309 aa12.05□□□□□ -0.48
SSH1-208ENST00000548522 GSKIPQ9P0R6 139 aa12.05□□□□□ -0.48
SSH1-208ENST00000548522 IGHV7-4-1A0A0J9YVY3 117 aa12.04□□□□□ -0.48
SSH1-208ENST00000548522 A0A1B0GU03 582 aa12.04□□□□□ -0.48
SSH1-208ENST00000548522 C15orf62A8K5M9 175 aa12.04□□□□□ -0.48
SSH1-208ENST00000548522 K7EMT4 169 aa12.04□□□□□ -0.48
SSH1-208ENST00000548522 K7EPK0 472 aa12.04□□□□□ -0.48
SSH1-208ENST00000548522 CHEK1O14757 476 aa12.04□□□□□ -0.48
SSH1-208ENST00000548522 MBPP02686 304 aaPredicted RBP12.04□□□□□ -0.48
SSH1-208ENST00000548522 CTSGP08311 255 aa12.04□□□□□ -0.48
SSH1-208ENST00000548522 FGF2P09038 288 aa12.04□□□□□ -0.48
SSH1-208ENST00000548522 S100A10P60903 97 aa12.04□□□□□ -0.48
SSH1-208ENST00000548522 SP6Q3SY56 376 aa12.04□□□□□ -0.48
SSH1-208ENST00000548522 THOC7Q6I9Y2 204 aaKnown RBP12.04□□□□□ -0.48
SSH1-208ENST00000548522 BAP18Q8IXM2 172 aa12.04□□□□□ -0.48
SSH1-208ENST00000548522 GBGT1Q8N5D6 347 aa12.04□□□□□ -0.48
SSH1-208ENST00000548522 OR1L8Q8NGR8 309 aa12.04□□□□□ -0.48
SSH1-208ENST00000548522 GATAD1Q8WUU5 269 aa12.04□□□□□ -0.48
SSH1-208ENST00000548522 RRNAD1Q96FB5 475 aaKnown RBP12.04□□□□□ -0.48
SSH1-208ENST00000548522 CYTL1Q9NRR1 136 aa12.04□□□□□ -0.48
SSH1-208ENST00000548522 ABCA13Q86UQ4 5058 aa12.03□□□□□ -0.48
SSH1-208ENST00000548522 CYB5BO43169 146 aa12.03□□□□□ -0.48
SSH1-208ENST00000548522 ATG12O94817 140 aa12.03□□□□□ -0.48
SSH1-208ENST00000548522 RPL12P30050 165 aaKnown RBP12.03□□□□□ -0.48
SSH1-208ENST00000548522 C11orf1Q9H5F2 150 aa12.03□□□□□ -0.48
SSH1-208ENST00000548522 PFDN2Q9UHV9 154 aa12.03□□□□□ -0.48
SSH1-208ENST00000548522 OR51B2Q9Y5P1 312 aa12.03□□□□□ -0.48
SSH1-208ENST00000548522 CA1P00915 261 aaPredicted RBP12.02□□□□□ -0.49
SSH1-208ENST00000548522 KRASP01116 189 aa12.02□□□□□ -0.49
SSH1-208ENST00000548522 IGHV3-48P01763 117 aa12.02□□□□□ -0.49
SSH1-208ENST00000548522 PVALBP20472 110 aaPredicted RBP12.02□□□□□ -0.49
SSH1-208ENST00000548522 G6PCP35575 357 aa12.02□□□□□ -0.49
SSH1-208ENST00000548522 ERVK-16P61578 105 aa12.02□□□□□ -0.49
SSH1-208ENST00000548522 ID3Q02535 119 aa12.02□□□□□ -0.49
SSH1-208ENST00000548522 FAM90A2PQ658T7 463 aa12.02□□□□□ -0.49
SSH1-208ENST00000548522 ALKAL2Q6UX46 152 aa12.02□□□□□ -0.49
SSH1-208ENST00000548522 HSD17B13Q7Z5P4 300 aaPredicted RBP12.02□□□□□ -0.49
SSH1-208ENST00000548522 COMMD7Q86VX2 200 aa12.02□□□□□ -0.49
SSH1-208ENST00000548522 FAM219AQ8IW50 185 aa12.02□□□□□ -0.49
SSH1-208ENST00000548522 TMEM116Q8NCL8 245 aa12.02□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 61 ms