RNA–Protein interactions for RNA: ENST00000548097.5

KRT4-201, Transcript of keratin 4, humanhuman

TSL 1 (best)

Gene KRT4, Length 1,839 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KRT4-201ENST00000548097 IFNA5P01569 189 aa13.12□□□□□ -0.31
KRT4-201ENST00000548097 RD3LP0DJH9 198 aa13.12□□□□□ -0.31
KRT4-201ENST00000548097 FHL3Q13643 280 aa13.12□□□□□ -0.31
KRT4-201ENST00000548097 MIC13Q5XKP0 118 aa13.12□□□□□ -0.31
KRT4-201ENST00000548097 TOMM20LQ6UXN7 152 aa13.12□□□□□ -0.31
KRT4-201ENST00000548097 GGTLC1Q9BX51 225 aa13.12□□□□□ -0.31
KRT4-201ENST00000548097 SELENOKQ9Y6D0 94 aa13.12□□□□□ -0.31
KRT4-201ENST00000548097 KANTRA0A1W2PQU2 76 aa13.11□□□□□ -0.31
KRT4-201ENST00000548097 PF4P02776 101 aa13.11□□□□□ -0.31
KRT4-201ENST00000548097 S100A1P23297 94 aa13.11□□□□□ -0.31
KRT4-201ENST00000548097 ATP6V0BQ99437 205 aa13.11□□□□□ -0.31
KRT4-201ENST00000548097 ZNF471Q9BX82 626 aaPredicted RBP13.11□□□□□ -0.31
KRT4-201ENST00000548097 SH3BGRL3Q9H299 93 aa13.11□□□□□ -0.31
KRT4-201ENST00000548097 TOMM40O96008 361 aa13.11□□□□□ -0.31
KRT4-201ENST00000548097 IL4P05112 153 aa13.11□□□□□ -0.31
KRT4-201ENST00000548097 YPEL3P61236 119 aaPredicted RBP13.11□□□□□ -0.31
KRT4-201ENST00000548097 RELQ04864 619 aaPredicted RBP13.11□□□□□ -0.31
KRT4-201ENST00000548097 ZNF266Q14584 549 aa13.11□□□□□ -0.31
KRT4-201ENST00000548097 ZNF600Q6ZNG1 722 aa13.11□□□□□ -0.31
KRT4-201ENST00000548097 SCGB1C1Q8TD33 95 aa13.11□□□□□ -0.31
KRT4-201ENST00000548097 PBDC1Q9BVG4 233 aa13.11□□□□□ -0.31
KRT4-201ENST00000548097 DOK5Q9P104 306 aa13.11□□□□□ -0.31
KRT4-201ENST00000548097 SLC45A2Q9UMX9 530 aa13.11□□□□□ -0.31
KRT4-201ENST00000548097 IGHV3-49A0A0A0MS15 119 aa13.1□□□□□ -0.31
KRT4-201ENST00000548097 ZP3P21754 424 aa13.1□□□□□ -0.31
KRT4-201ENST00000548097 KLF5Q13887 457 aaPredicted RBP13.1□□□□□ -0.31
KRT4-201ENST00000548097 OPCMLQ14982 345 aa13.1□□□□□ -0.31
KRT4-201ENST00000548097 OR51G1Q8NGK1 321 aa13.1□□□□□ -0.31
KRT4-201ENST00000548097 Q8WTZ3 238 aa13.1□□□□□ -0.31
KRT4-201ENST00000548097 ZFAND3Q9H8U3 227 aa13.1□□□□□ -0.31
KRT4-201ENST00000548097 TAAR5O14804 337 aa13.09□□□□□ -0.31
KRT4-201ENST00000548097 MYCNOSP40205 109 aa13.09□□□□□ -0.31
KRT4-201ENST00000548097 LYZP61626 148 aa13.09□□□□□ -0.31
KRT4-201ENST00000548097 USF2Q15853 346 aaPredicted RBP13.09□□□□□ -0.31
KRT4-201ENST00000548097 TM4SF20Q53R12 229 aa13.09□□□□□ -0.31
KRT4-201ENST00000548097 STPG3Q8N7X2 389 aa13.09□□□□□ -0.31
KRT4-201ENST00000548097 OR4F17Q8NGA8 305 aa13.09□□□□□ -0.31
KRT4-201ENST00000548097 OR4F4Q96R69 305 aa13.09□□□□□ -0.31
KRT4-201ENST00000548097 IGHV3OR16-13A0A075B7E8 117 aa13.09□□□□□ -0.31
KRT4-201ENST00000548097 IGHV3-74A0A0B4J1X5 117 aa13.09□□□□□ -0.31
KRT4-201ENST00000548097 NDUFA4O00483 81 aa13.09□□□□□ -0.31
KRT4-201ENST00000548097 SCGB2A1O75556 95 aa13.09□□□□□ -0.31
KRT4-201ENST00000548097 LINC00869P0C866 280 aa13.09□□□□□ -0.31
KRT4-201ENST00000548097 ORM2P19652 201 aa13.09□□□□□ -0.31
KRT4-201ENST00000548097 ATP6V0CP27449 155 aa13.09□□□□□ -0.31
KRT4-201ENST00000548097 GCSAMLQ5JQS6 135 aa13.09□□□□□ -0.31
KRT4-201ENST00000548097 GPHB5Q86YW7 130 aa13.09□□□□□ -0.31
KRT4-201ENST00000548097 PXMP4Q9Y6I8 212 aa13.09□□□□□ -0.31
KRT4-201ENST00000548097 BORCS7-ASMTA0A0B4J1R7 106 aa13.08□□□□□ -0.32
KRT4-201ENST00000548097 RAB31Q13636 194 aa13.08□□□□□ -0.32
KRT4-201ENST00000548097 FAM106AQ4KMX7 169 aa13.08□□□□□ -0.32
KRT4-201ENST00000548097 RNF125Q96EQ8 232 aa13.08□□□□□ -0.32
KRT4-201ENST00000548097 IGHV3-66A0A0C4DH42 116 aa13.07□□□□□ -0.32
KRT4-201ENST00000548097 JTBO76095 146 aa13.07□□□□□ -0.32
KRT4-201ENST00000548097 APOHP02749 345 aaPredicted RBP13.07□□□□□ -0.32
KRT4-201ENST00000548097 ELLP55199 621 aaPredicted RBP13.07□□□□□ -0.32
KRT4-201ENST00000548097 B2MP61769 119 aa13.07□□□□□ -0.32
KRT4-201ENST00000548097 PRR20EP86478 221 aa13.07□□□□□ -0.32
KRT4-201ENST00000548097 PRR20CP86479 221 aa13.07□□□□□ -0.32
KRT4-201ENST00000548097 PRR20DP86480 221 aa13.07□□□□□ -0.32
KRT4-201ENST00000548097 PRR20BP86481 221 aa13.07□□□□□ -0.32
KRT4-201ENST00000548097 PRR20AP86496 221 aa13.07□□□□□ -0.32
KRT4-201ENST00000548097 C1QL4Q86Z23 238 aa13.07□□□□□ -0.32
KRT4-201ENST00000548097 LINC00482Q8N8I6 264 aa13.07□□□□□ -0.32
KRT4-201ENST00000548097 ZNF709Q8N972 641 aa13.07□□□□□ -0.32
KRT4-201ENST00000548097 OR1B1Q8NGR6 318 aa13.07□□□□□ -0.32
KRT4-201ENST00000548097 TMEM190Q8WZ59 177 aa13.07□□□□□ -0.32
KRT4-201ENST00000548097 WI2-2373I1.2A0A1W2PRP0 233 aa13.06□□□□□ -0.32
KRT4-201ENST00000548097 MPDU1O75352 247 aa13.06□□□□□ -0.32
KRT4-201ENST00000548097 UHRF2Q96PU4 802 aa13.06□□□□□ -0.32
KRT4-201ENST00000548097 PARD6GQ9BYG4 376 aaPredicted RBP13.06□□□□□ -0.32
KRT4-201ENST00000548097 SLC25A32Q9H2D1 315 aa13.06□□□□□ -0.32
KRT4-201ENST00000548097 SLC39A9Q9NUM3 307 aa13.06□□□□□ -0.32
KRT4-201ENST00000548097 M0QZ24 198 aa13.06□□□□□ -0.32
KRT4-201ENST00000548097 EIF3GO75821 320 aaKnown RBP eCLIP13.06□□□□□ -0.32
KRT4-201ENST00000548097 RPL29P47914 159 aaKnown RBP13.06□□□□□ -0.32
KRT4-201ENST00000548097 VSIRQ9H7M9 311 aa13.06□□□□□ -0.32
KRT4-201ENST00000548097 TMEM213A2RRL7 107 aa13.05□□□□□ -0.32
KRT4-201ENST00000548097 C17orf112F2Z3M2 114 aa13.05□□□□□ -0.32
KRT4-201ENST00000548097 OVOL1O14753 267 aa13.05□□□□□ -0.32
KRT4-201ENST00000548097 RGS13O14921 159 aa13.05□□□□□ -0.32
KRT4-201ENST00000548097 FABP1P07148 127 aa13.05□□□□□ -0.32
KRT4-201ENST00000548097 OR5G3P0C626 314 aa13.05□□□□□ -0.32
KRT4-201ENST00000548097 SELENOTP62341 195 aa13.05□□□□□ -0.32
KRT4-201ENST00000548097 FFAR4Q5NUL3 377 aa13.05□□□□□ -0.32
KRT4-201ENST00000548097 PATE2Q6UY27 113 aa13.05□□□□□ -0.32
KRT4-201ENST00000548097 OR9G4Q8NGQ1 327 aa13.05□□□□□ -0.32
KRT4-201ENST00000548097 TMEM37Q8WXS4 190 aa13.05□□□□□ -0.32
KRT4-201ENST00000548097 GINS3Q9BRX5 216 aa13.05□□□□□ -0.32
KRT4-201ENST00000548097 KRTAP21-3Q3LHN1 58 aa13.04□□□□□ -0.32
KRT4-201ENST00000548097 ADAMTSL5Q6ZMM2 481 aa13.04□□□□□ -0.32
KRT4-201ENST00000548097 REC114Q7Z4M0 266 aa13.04□□□□□ -0.32
KRT4-201ENST00000548097 LGALS9O00182 355 aa13.04□□□□□ -0.32
KRT4-201ENST00000548097 LEMD1Q68G75 181 aa13.04□□□□□ -0.32
KRT4-201ENST00000548097 IL34Q6ZMJ4 242 aa13.04□□□□□ -0.32
KRT4-201ENST00000548097 Q6ZRG5 221 aa13.04□□□□□ -0.32
KRT4-201ENST00000548097 ARV1Q9H2C2 271 aa13.04□□□□□ -0.32
KRT4-201ENST00000548097 PLA2G2EQ9NZK7 142 aa13.04□□□□□ -0.32
KRT4-201ENST00000548097 C2orf70A6NJV1 201 aa13.03□□□□□ -0.32
KRT4-201ENST00000548097 MORN5Q5VZ52 161 aa13.03□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms