RNA–Protein interactions for RNA: ENST00000546744.5

PTCH1-212, Transcript of patched 1, humanhuman

TSL 2

Gene PTCH1, Length 4,389 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-212ENST00000546744 RALGAPA1Q6GYQ0 2036 aa10.61□□□□□ -0.71
PTCH1-212ENST00000546744 TCF20Q9UGU0 1960 aaKnown RBP10.61□□□□□ -0.71
PTCH1-212ENST00000546744 UBE2L6O14933 153 aa10.61□□□□□ -0.71
PTCH1-212ENST00000546744 TCRAP04437 139 aa10.61□□□□□ -0.71
PTCH1-212ENST00000546744 SAA1P0DJI8 122 aaPredicted RBP10.61□□□□□ -0.71
PTCH1-212ENST00000546744 CCL8P80075 99 aa10.61□□□□□ -0.71
PTCH1-212ENST00000546744 C11orf68Q9H3H3 251 aaKnown RBP10.61□□□□□ -0.71
PTCH1-212ENST00000546744 TMEM74BQ9NUR3 256 aa10.61□□□□□ -0.71
PTCH1-212ENST00000546744 RIF1Q5UIP0 2472 aaKnown RBP10.6□□□□□ -0.71
PTCH1-212ENST00000546744 DOCK8Q8NF50 2099 aa10.6□□□□□ -0.71
PTCH1-212ENST00000546744 MLNRO43193 412 aa10.6□□□□□ -0.71
PTCH1-212ENST00000546744 IL18BPO95998 194 aa10.6□□□□□ -0.71
PTCH1-212ENST00000546744 TOMM40O96008 361 aa10.6□□□□□ -0.71
PTCH1-212ENST00000546744 SP9P0CG40 484 aa10.6□□□□□ -0.71
PTCH1-212ENST00000546744 LGALS9BQ3B8N2 356 aa10.6□□□□□ -0.71
PTCH1-212ENST00000546744 LGALS9CQ6DKI2 356 aa10.6□□□□□ -0.71
PTCH1-212ENST00000546744 ZNF562Q6V9R5 426 aa10.6□□□□□ -0.71
PTCH1-212ENST00000546744 DDB2Q92466 427 aa10.6□□□□□ -0.71
PTCH1-212ENST00000546744 APELAP0DMC3 54 aa10.6□□□□□ -0.71
PTCH1-212ENST00000546744 H3BTX0 84 aa10.6□□□□□ -0.71
PTCH1-212ENST00000546744 SELLP14151 372 aa10.6□□□□□ -0.71
PTCH1-212ENST00000546744 RAMP3O60896 148 aa10.59□□□□□ -0.71
PTCH1-212ENST00000546744 SUMO2P61956 95 aaKnown RBP10.59□□□□□ -0.71
PTCH1-212ENST00000546744 FLVCR1-AS1Q8TAF5 88 aa10.59□□□□□ -0.71
PTCH1-212ENST00000546744 RNF125Q96EQ8 232 aa10.59□□□□□ -0.71
PTCH1-212ENST00000546744 NCOR1O75376 2440 aa10.59□□□□□ -0.71
PTCH1-212ENST00000546744 ZDBF2Q9HCK1 2354 aa10.59□□□□□ -0.71
PTCH1-212ENST00000546744 FOXL2NBQ6ZUU3 175 aa10.59□□□□□ -0.71
PTCH1-212ENST00000546744 MAFAQ8NHW3 353 aaPredicted RBP10.59□□□□□ -0.71
PTCH1-212ENST00000546744 LIME1Q9H400 295 aa10.59□□□□□ -0.71
PTCH1-212ENST00000546744 SLAQ13239 276 aa10.59□□□□□ -0.71
PTCH1-212ENST00000546744 SPATA31B1PQ5VZV4 182 aa10.59□□□□□ -0.71
PTCH1-212ENST00000546744 DMRTA2Q96SC8 542 aa10.59□□□□□ -0.71
PTCH1-212ENST00000546744 DENND4CQ5VZ89 1909 aa10.59□□□□□ -0.71
PTCH1-212ENST00000546744 IGKV3D-15A0A087WSY6 115 aa10.58□□□□□ -0.72
PTCH1-212ENST00000546744 CDKN1AP38936 164 aa10.58□□□□□ -0.72
PTCH1-212ENST00000546744 PTPRSQ13332 1948 aa10.58□□□□□ -0.72
PTCH1-212ENST00000546744 IGHV3-72A0A0B4J1Y9 119 aa10.58□□□□□ -0.72
PTCH1-212ENST00000546744 TRAV21A0A0B4J279 112 aa10.58□□□□□ -0.72
PTCH1-212ENST00000546744 GAGE12HA6NDE8 117 aa10.58□□□□□ -0.72
PTCH1-212ENST00000546744 PYYP10082 97 aa10.58□□□□□ -0.72
PTCH1-212ENST00000546744 SNRPD3P62318 126 aaKnown RBP10.58□□□□□ -0.72
PTCH1-212ENST00000546744 ATP5G2Q06055 141 aa10.58□□□□□ -0.72
PTCH1-212ENST00000546744 DEFB125Q8N687 156 aa10.58□□□□□ -0.72
PTCH1-212ENST00000546744 PLSCR4Q9NRQ2 329 aa10.58□□□□□ -0.72
PTCH1-212ENST00000546744 C15orf62A8K5M9 175 aa10.58□□□□□ -0.72
PTCH1-212ENST00000546744 M0R381 172 aa10.58□□□□□ -0.72
PTCH1-212ENST00000546744 TIAF1O95411 115 aa10.58□□□□□ -0.72
PTCH1-212ENST00000546744 IGLV3-19P01714 112 aa10.58□□□□□ -0.72
PTCH1-212ENST00000546744 HGFACQ04756 655 aa10.58□□□□□ -0.72
PTCH1-212ENST00000546744 PSG7Q13046 419 aa10.58□□□□□ -0.72
PTCH1-212ENST00000546744 ESPL1Q14674 2120 aa10.58□□□□□ -0.72
PTCH1-212ENST00000546744 TMEM95Q3KNT9 176 aa10.58□□□□□ -0.72
PTCH1-212ENST00000546744 ZC2HC1BQ5TFG8 222 aa10.58□□□□□ -0.72
PTCH1-212ENST00000546744 RSPO3Q9BXY4 272 aaPredicted RBP10.58□□□□□ -0.72
PTCH1-212ENST00000546744 TNFRSF18Q9Y5U5 241 aa10.58□□□□□ -0.72
PTCH1-212ENST00000546744 OBSL1O75147 1896 aa10.58□□□□□ -0.72
PTCH1-212ENST00000546744 NPFFO15130 113 aa10.58□□□□□ -0.72
PTCH1-212ENST00000546744 CEACAM4O75871 244 aa10.58□□□□□ -0.72
PTCH1-212ENST00000546744 SAA2P0DJI9 122 aaPredicted RBP10.58□□□□□ -0.72
PTCH1-212ENST00000546744 GATA2P23769 480 aaPredicted RBP10.58□□□□□ -0.72
PTCH1-212ENST00000546744 GNG5P63218 68 aa10.58□□□□□ -0.72
PTCH1-212ENST00000546744 SEPSECSQ9HD40 501 aaKnown RBP10.58□□□□□ -0.72
PTCH1-212ENST00000546744 DPM3Q9P2X0 92 aa10.58□□□□□ -0.72
PTCH1-212ENST00000546744 LOC102723996A0A087X1L8 192 aa10.57□□□□□ -0.72
PTCH1-212ENST00000546744 STPG4Q8N801 248 aa10.57□□□□□ -0.72
PTCH1-212ENST00000546744 NABP1Q96AH0 204 aa10.57□□□□□ -0.72
PTCH1-212ENST00000546744 ARRDC1-AS1Q9H2J1 176 aa10.57□□□□□ -0.72
PTCH1-212ENST00000546744 GFRA3O60609 400 aa10.57□□□□□ -0.72
PTCH1-212ENST00000546744 ZNRF1Q8ND25 227 aa10.57□□□□□ -0.72
PTCH1-212ENST00000546744 RNF5Q99942 180 aa10.57□□□□□ -0.72
PTCH1-212ENST00000546744 HELZP42694 1942 aaKnown RBP10.57□□□□□ -0.72
PTCH1-212ENST00000546744 D6R8Y8 96 aa10.57□□□□□ -0.72
PTCH1-212ENST00000546744 M0R2P5 195 aa10.57□□□□□ -0.72
PTCH1-212ENST00000546744 IGLL1P15814 213 aa10.57□□□□□ -0.72
PTCH1-212ENST00000546744 CNTFRP26992 372 aa10.57□□□□□ -0.72
PTCH1-212ENST00000546744 FOXF2Q12947 444 aa10.57□□□□□ -0.72
PTCH1-212ENST00000546744 NEGR1Q7Z3B1 354 aa10.57□□□□□ -0.72
PTCH1-212ENST00000546744 PNRC2Q9NPJ4 139 aaKnown RBP10.57□□□□□ -0.72
PTCH1-212ENST00000546744 A0A1W2PPM0 123 aa10.56□□□□□ -0.72
PTCH1-212ENST00000546744 A0A1W2PR77 199 aa10.56□□□□□ -0.72
PTCH1-212ENST00000546744 IGLC7A0M8Q6 106 aa10.56□□□□□ -0.72
PTCH1-212ENST00000546744 LGALS1P09382 135 aaKnown RBP10.56□□□□□ -0.72
PTCH1-212ENST00000546744 BVES-AS1Q5T3Y7 98 aa10.56□□□□□ -0.72
PTCH1-212ENST00000546744 TSSC4Q9Y5U2 329 aaPredicted RBP10.56□□□□□ -0.72
PTCH1-212ENST00000546744 SLC25A15Q9Y619 301 aa10.56□□□□□ -0.72
PTCH1-212ENST00000546744 TRAV8-1A0A0A6YYK1 113 aa10.56□□□□□ -0.72
PTCH1-212ENST00000546744 TMEM8BA6NDV4 472 aa10.56□□□□□ -0.72
PTCH1-212ENST00000546744 CD33P20138 364 aa10.56□□□□□ -0.72
PTCH1-212ENST00000546744 PEAR1Q5VY43 1037 aaPredicted RBP10.56□□□□□ -0.72
PTCH1-212ENST00000546744 RAX2Q96IS3 184 aa10.56□□□□□ -0.72
PTCH1-212ENST00000546744 CSTL1Q9H114 145 aa10.56□□□□□ -0.72
PTCH1-212ENST00000546744 CENPVQ7Z7K6 275 aaPredicted RBP10.56□□□□□ -0.72
PTCH1-212ENST00000546744 MRPL20Q9BYC9 149 aaKnown RBP10.56□□□□□ -0.72
PTCH1-212ENST00000546744 PGPEP1Q9NXJ5 209 aa10.56□□□□□ -0.72
PTCH1-212ENST00000546744 TRAV2A0A0B4J234 112 aa10.56□□□□□ -0.72
PTCH1-212ENST00000546744 PDE6HQ13956 83 aa10.56□□□□□ -0.72
PTCH1-212ENST00000546744 WIPF2Q8TF74 440 aaPredicted RBP10.56□□□□□ -0.72
PTCH1-212ENST00000546744 LEAP2Q969E1 77 aa10.56□□□□□ -0.72
PTCH1-212ENST00000546744 BRCA2P51587 3418 aa10.55□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 72.4 ms