RNA–Protein interactions for RNA: ENST00000545688.5

SNHG1-224, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 3

Gene SNHG1, Length 610 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-224ENST00000545688 NCK1P16333 377 aa1.65□□□□□ -2.15
SNHG1-224ENST00000545688 PRKACAP17612 351 aa1.65□□□□□ -2.15
SNHG1-224ENST00000545688 IL3RAP26951 378 aa1.65□□□□□ -2.15
SNHG1-224ENST00000545688 ATP1B3P54709 279 aa1.65□□□□□ -2.15
SNHG1-224ENST00000545688 KRTAP10-4P60372 401 aaPredicted RBP1.65□□□□□ -2.15
SNHG1-224ENST00000545688 GK3PQ14409 553 aa1.65□□□□□ -2.15
SNHG1-224ENST00000545688 RPEL1Q2QD12 228 aa1.65□□□□□ -2.15
SNHG1-224ENST00000545688 MORN2Q502X0 79 aa1.65□□□□□ -2.15
SNHG1-224ENST00000545688 LRRC23Q53EV4 343 aaPredicted RBP1.65□□□□□ -2.15
SNHG1-224ENST00000545688 RPL13AP3Q6NVV1 102 aa1.65□□□□□ -2.15
SNHG1-224ENST00000545688 Q6ZRN7 208 aaPredicted RBP1.65□□□□□ -2.15
SNHG1-224ENST00000545688 RASSF6Q6ZTQ3 369 aa1.65□□□□□ -2.15
SNHG1-224ENST00000545688 MNS1Q8NEH6 495 aa1.65□□□□□ -2.15
SNHG1-224ENST00000545688 ZNRF2Q8NHG8 242 aa1.65□□□□□ -2.15
SNHG1-224ENST00000545688 THEM6Q8WUY1 208 aa1.65□□□□□ -2.15
SNHG1-224ENST00000545688 CACNG8Q8WXS5 425 aa1.65□□□□□ -2.15
SNHG1-224ENST00000545688 GHSRQ92847 366 aa1.65□□□□□ -2.15
SNHG1-224ENST00000545688 SH3GL1Q99961 368 aa1.65□□□□□ -2.15
SNHG1-224ENST00000545688 MRPL20Q9BYC9 149 aaKnown RBP1.65□□□□□ -2.15
SNHG1-224ENST00000545688 CMTM6Q9NX76 183 aa1.65□□□□□ -2.15
SNHG1-224ENST00000545688 BAIAP2Q9UQB8 552 aa1.65□□□□□ -2.15
SNHG1-224ENST00000545688 SAMHD1Q9Y3Z3 626 aaKnown RBP1.65□□□□□ -2.15
SNHG1-224ENST00000545688 DEFB131BA0A096LNP1 70 aa1.64□□□□□ -2.15
SNHG1-224ENST00000545688 H0YJW9 148 aa1.64□□□□□ -2.15
SNHG1-224ENST00000545688 H0YJX3 145 aa1.64□□□□□ -2.15
SNHG1-224ENST00000545688 J3QRE1 110 aa1.64□□□□□ -2.15
SNHG1-224ENST00000545688 SDCBPO00560 298 aaPredicted RBP1.64□□□□□ -2.15
SNHG1-224ENST00000545688 DEGS1O15121 323 aa1.64□□□□□ -2.15
SNHG1-224ENST00000545688 ANGPT2O15123 496 aa1.64□□□□□ -2.15
SNHG1-224ENST00000545688 GATBO75879 557 aaKnown RBP1.64□□□□□ -2.15
SNHG1-224ENST00000545688 CA2P00918 260 aa1.64□□□□□ -2.15
SNHG1-224ENST00000545688 OXTP01178 125 aa1.64□□□□□ -2.15
SNHG1-224ENST00000545688 IFNA10P01566 189 aa1.64□□□□□ -2.15
SNHG1-224ENST00000545688 IGLV6-57P01721 117 aa1.64□□□□□ -2.15
SNHG1-224ENST00000545688 MT-ND4P03905 459 aa1.64□□□□□ -2.15
SNHG1-224ENST00000545688 MT1HL1P0DM35 61 aa1.64□□□□□ -2.15
SNHG1-224ENST00000545688 ATF1P18846 271 aa1.64□□□□□ -2.15
SNHG1-224ENST00000545688 GALP22466 123 aa1.64□□□□□ -2.15
SNHG1-224ENST00000545688 RBP2P50120 134 aa1.64□□□□□ -2.15
SNHG1-224ENST00000545688 HCCSP53701 268 aa1.64□□□□□ -2.15
SNHG1-224ENST00000545688 ADARB1P78563 741 aaKnown RBP1.64□□□□□ -2.15
SNHG1-224ENST00000545688 DEFA5Q01523 94 aa1.64□□□□□ -2.15
SNHG1-224ENST00000545688 FXYD3Q14802 87 aa1.64□□□□□ -2.15
SNHG1-224ENST00000545688 MORN3Q6PF18 240 aaPredicted RBP1.64□□□□□ -2.15
SNHG1-224ENST00000545688 LINC00596Q86U02 117 aa1.64□□□□□ -2.15
SNHG1-224ENST00000545688 CYP4Z1Q86W10 505 aa1.64□□□□□ -2.15
SNHG1-224ENST00000545688 PXT1Q8NFP0 134 aa1.64□□□□□ -2.15
SNHG1-224ENST00000545688 OR5T1Q8NG75 326 aa1.64□□□□□ -2.15
SNHG1-224ENST00000545688 OR1L6Q8NGR2 347 aa1.64□□□□□ -2.15
SNHG1-224ENST00000545688 OR6K6Q8NGW6 343 aa1.64□□□□□ -2.15
SNHG1-224ENST00000545688 OR4A5Q8NH83 315 aa1.64□□□□□ -2.15
SNHG1-224ENST00000545688 GNPDA2Q8TDQ7 276 aa1.64□□□□□ -2.15
SNHG1-224ENST00000545688 ASB17Q8WXJ9 295 aa1.64□□□□□ -2.15
SNHG1-224ENST00000545688 ARL11Q969Q4 196 aa1.64□□□□□ -2.15
SNHG1-224ENST00000545688 ADAT3Q96EY9 351 aaPredicted RBP1.64□□□□□ -2.15
SNHG1-224ENST00000545688 BORCS8Q96FH0 119 aa1.64□□□□□ -2.15
SNHG1-224ENST00000545688 AGMATQ9BSE5 352 aa1.64□□□□□ -2.15
SNHG1-224ENST00000545688 TSSK6Q9BXA6 273 aa1.64□□□□□ -2.15
SNHG1-224ENST00000545688 MROQ9BYG7 248 aa1.64□□□□□ -2.15
SNHG1-224ENST00000545688 YIPF3Q9GZM5 350 aa1.64□□□□□ -2.15
SNHG1-224ENST00000545688 SLC2A9Q9NRM0 540 aa1.64□□□□□ -2.15
SNHG1-224ENST00000545688 TAS2R1Q9NYW7 299 aa1.64□□□□□ -2.15
SNHG1-224ENST00000545688 ENOPH1Q9UHY7 261 aa1.64□□□□□ -2.15
SNHG1-224ENST00000545688 OR52A1Q9UKL2 312 aa1.64□□□□□ -2.15
SNHG1-224ENST00000545688 R4GMQ9 66 aa1.64□□□□□ -2.15
SNHG1-224ENST00000545688 IGHV3-43A0A0B4J1X8 118 aa1.63□□□□□ -2.15
SNHG1-224ENST00000545688 TMEM30CPA0ZSE6 113 aa1.63□□□□□ -2.15
SNHG1-224ENST00000545688 OR5H14A6NHG9 310 aa1.63□□□□□ -2.15
SNHG1-224ENST00000545688 FAM223BA6NKX1 122 aa1.63□□□□□ -2.15
SNHG1-224ENST00000545688 RIIAD1A6NNX1 92 aa1.63□□□□□ -2.15
SNHG1-224ENST00000545688 PPP5D1E7EU14 171 aa1.63□□□□□ -2.15
SNHG1-224ENST00000545688 NME4O00746 187 aa1.63□□□□□ -2.15
SNHG1-224ENST00000545688 ITGB1BP1O14713 200 aa1.63□□□□□ -2.15
SNHG1-224ENST00000545688 SLC22A1O15245 554 aa1.63□□□□□ -2.15
SNHG1-224ENST00000545688 TGOLN2O43493 480 aa1.63□□□□□ -2.15
SNHG1-224ENST00000545688 SULT1B1O43704 296 aa1.63□□□□□ -2.15
SNHG1-224ENST00000545688 YPEL1O60688 119 aa1.63□□□□□ -2.15
SNHG1-224ENST00000545688 GGCTO75223 188 aaKnown RBP1.63□□□□□ -2.15
SNHG1-224ENST00000545688 SC5DO75845 299 aa1.63□□□□□ -2.15
SNHG1-224ENST00000545688 SCGNO76038 276 aa1.63□□□□□ -2.15
SNHG1-224ENST00000545688 GADD45GO95257 159 aa1.63□□□□□ -2.15
SNHG1-224ENST00000545688 HLA-AP01891 365 aaKnown RBP1.63□□□□□ -2.15
SNHG1-224ENST00000545688 SMR3BP02814 79 aaPredicted RBP1.63□□□□□ -2.15
SNHG1-224ENST00000545688 IGKV1-16P04430 117 aa1.63□□□□□ -2.15
SNHG1-224ENST00000545688 DBTP11182 482 aaKnown RBP1.63□□□□□ -2.15
SNHG1-224ENST00000545688 MIFP14174 115 aa1.63□□□□□ -2.15
SNHG1-224ENST00000545688 RPA2P15927 270 aa1.63□□□□□ -2.15
SNHG1-224ENST00000545688 ZNF3P17036 446 aa1.63□□□□□ -2.15
SNHG1-224ENST00000545688 PRKACBP22694 351 aa1.63□□□□□ -2.15
SNHG1-224ENST00000545688 PSMB6P28072 239 aa1.63□□□□□ -2.15
SNHG1-224ENST00000545688 CD40LGP29965 261 aa1.63□□□□□ -2.15
SNHG1-224ENST00000545688 IFNGR2P38484 337 aa1.63□□□□□ -2.15
SNHG1-224ENST00000545688 SMIM11AP58511 58 aa1.63□□□□□ -2.15
SNHG1-224ENST00000545688 RHOGP84095 191 aa1.63□□□□□ -2.15
SNHG1-224ENST00000545688 HTD2P86397 168 aa1.63□□□□□ -2.15
SNHG1-224ENST00000545688 LIPEQ05469 1076 aa1.63□□□□□ -2.15
SNHG1-224ENST00000545688 LTC4SQ16873 150 aa1.63□□□□□ -2.15
SNHG1-224ENST00000545688 ZNF829Q3KNS6 432 aaPredicted RBP1.63□□□□□ -2.15
SNHG1-224ENST00000545688 METTL21CQ5VZV1 264 aa1.63□□□□□ -2.15
SNHG1-224ENST00000545688 FAM223AQ8IWN6 122 aa1.63□□□□□ -2.15
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms