RNA–Protein interactions for RNA: ENST00000545686.6

TDP1-204, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 1 (best)

Gene TDP1, Length 2,488 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-204ENST00000545686 NUP37Q8NFH4 326 aa7.04□□□□□ -1.28
TDP1-204ENST00000545686 NDFIP1Q9BT67 221 aa7.04□□□□□ -1.28
TDP1-204ENST00000545686 CUL9Q8IWT3 2517 aa7.04□□□□□ -1.28
TDP1-204ENST00000545686 IGHV1-24A0A0C4DH33 117 aa7.04□□□□□ -1.28
TDP1-204ENST00000545686 NPIPB6E9PJ23 425 aa7.04□□□□□ -1.28
TDP1-204ENST00000545686 SYS1-DBNDD2H3BUS1 97 aa7.04□□□□□ -1.28
TDP1-204ENST00000545686 HLA-DRB1P01911 266 aa7.04□□□□□ -1.28
TDP1-204ENST00000545686 TNFRSF1AP19438 455 aa7.04□□□□□ -1.28
TDP1-204ENST00000545686 PCP4P48539 62 aa7.04□□□□□ -1.28
TDP1-204ENST00000545686 PLP1P60201 277 aa7.04□□□□□ -1.28
TDP1-204ENST00000545686 RPS20P60866 119 aaKnown RBP7.04□□□□□ -1.28
TDP1-204ENST00000545686 TMEM191AQ9H0A3 160 aa7.04□□□□□ -1.28
TDP1-204ENST00000545686 A0A1W2PPI3 338 aa7.03□□□□□ -1.28
TDP1-204ENST00000545686 PGPA6NDG6 321 aa7.03□□□□□ -1.28
TDP1-204ENST00000545686 MOSP00540 346 aa7.03□□□□□ -1.28
TDP1-204ENST00000545686 LIPFP07098 398 aa7.03□□□□□ -1.28
TDP1-204ENST00000545686 NBEAP1P0C6P0 100 aa7.03□□□□□ -1.28
TDP1-204ENST00000545686 GP9P14770 177 aa7.03□□□□□ -1.28
TDP1-204ENST00000545686 MC5RP33032 325 aa7.03□□□□□ -1.28
TDP1-204ENST00000545686 FBLN7Q53RD9 439 aa7.03□□□□□ -1.28
TDP1-204ENST00000545686 TCF24Q7RTU0 167 aa7.03□□□□□ -1.28
TDP1-204ENST00000545686 SPATA12Q7Z6I5 190 aa7.03□□□□□ -1.28
TDP1-204ENST00000545686 CLEC5AQ9NY25 188 aa7.03□□□□□ -1.28
TDP1-204ENST00000545686 MRPL36Q9P0J6 103 aaKnown RBP7.03□□□□□ -1.28
TDP1-204ENST00000545686 SVILO95425 2214 aa7.03□□□□□ -1.28
TDP1-204ENST00000545686 ICE1Q9Y2F5 2266 aa7.03□□□□□ -1.28
TDP1-204ENST00000545686 TRBV6-1A0A0K0K1D8 114 aa7.03□□□□□ -1.28
TDP1-204ENST00000545686 LEPROTL1O95214 131 aa7.03□□□□□ -1.28
TDP1-204ENST00000545686 TCRAP04437 139 aa7.03□□□□□ -1.28
TDP1-204ENST00000545686 ASPHD1Q5U4P2 390 aa7.03□□□□□ -1.28
TDP1-204ENST00000545686 ALKBH2Q6NS38 261 aa7.03□□□□□ -1.28
TDP1-204ENST00000545686 PET117Q6UWS5 81 aa7.03□□□□□ -1.28
TDP1-204ENST00000545686 KIR3DL3Q8N743 410 aa7.03□□□□□ -1.28
TDP1-204ENST00000545686 TMEM116Q8NCL8 245 aa7.03□□□□□ -1.28
TDP1-204ENST00000545686 GTSF1Q8WW33 167 aa7.03□□□□□ -1.28
TDP1-204ENST00000545686 ST6GALNAC6Q969X2 333 aa7.03□□□□□ -1.28
TDP1-204ENST00000545686 GUCD1Q96NT3 240 aa7.03□□□□□ -1.28
TDP1-204ENST00000545686 TRAV30A0A087WSZ9 112 aa7.02□□□□□ -1.29
TDP1-204ENST00000545686 LOC102724200A0A096LPH7 203 aaPredicted RBP7.02□□□□□ -1.29
TDP1-204ENST00000545686 C22orf46C9J442 243 aa7.02□□□□□ -1.29
TDP1-204ENST00000545686 HSBP1L1C9JCN9 74 aa7.02□□□□□ -1.29
TDP1-204ENST00000545686 LGALS7P47929 136 aa7.02□□□□□ -1.29
TDP1-204ENST00000545686 RBX1P62877 108 aa7.02□□□□□ -1.29
TDP1-204ENST00000545686 C10orf55Q5SWW7 151 aa7.02□□□□□ -1.29
TDP1-204ENST00000545686 OR1B1Q8NGR6 318 aa7.02□□□□□ -1.29
TDP1-204ENST00000545686 BLNKQ8WV28 456 aa7.02□□□□□ -1.29
TDP1-204ENST00000545686 DAZAP1Q96EP5 407 aaKnown RBP7.02□□□□□ -1.29
TDP1-204ENST00000545686 MS4A6AQ9H2W1 248 aa7.02□□□□□ -1.29
TDP1-204ENST00000545686 WDFY4Q6ZS81 3184 aa7.02□□□□□ -1.29
TDP1-204ENST00000545686 HAX1O00165 279 aa7.02□□□□□ -1.29
TDP1-204ENST00000545686 CEACAM4O75871 244 aa7.02□□□□□ -1.29
TDP1-204ENST00000545686 CCL3L1P16619 93 aa7.02□□□□□ -1.29
TDP1-204ENST00000545686 ORM2P19652 201 aa7.02□□□□□ -1.29
TDP1-204ENST00000545686 CD40P25942 277 aa7.02□□□□□ -1.29
TDP1-204ENST00000545686 CDKN1BP46527 198 aa7.02□□□□□ -1.29
TDP1-204ENST00000545686 RHOGP84095 191 aa7.02□□□□□ -1.29
TDP1-204ENST00000545686 C1orf185Q5T7R7 199 aa7.02□□□□□ -1.29
TDP1-204ENST00000545686 TMEM200BQ69YZ2 307 aa7.02□□□□□ -1.29
TDP1-204ENST00000545686 SLC25A34Q6PIV7 304 aa7.02□□□□□ -1.29
TDP1-204ENST00000545686 C16orf54Q6UWD8 224 aa7.02□□□□□ -1.29
TDP1-204ENST00000545686 Q86TA4 180 aa7.02□□□□□ -1.29
TDP1-204ENST00000545686 MAP1LC3CQ9BXW4 147 aa7.02□□□□□ -1.29
TDP1-204ENST00000545686 Q9H3A6 140 aa7.02□□□□□ -1.29
TDP1-204ENST00000545686 OTORQ9NRC9 128 aa7.02□□□□□ -1.29
TDP1-204ENST00000545686 TMEM14CQ9P0S9 112 aa7.02□□□□□ -1.29
TDP1-204ENST00000545686 HSPB8Q9UJY1 196 aa7.02□□□□□ -1.29
TDP1-204ENST00000545686 FAM215AQ9Y5M1 114 aa7.02□□□□□ -1.29
TDP1-204ENST00000545686 ARFGEF3Q5TH69 2177 aa7.02□□□□□ -1.29
TDP1-204ENST00000545686 LOC105371242A0A075B767 164 aa7.01□□□□□ -1.29
TDP1-204ENST00000545686 CHEK1O14757 476 aa7.01□□□□□ -1.29
TDP1-204ENST00000545686 PLAUP00749 431 aa7.01□□□□□ -1.29
TDP1-204ENST00000545686 C12orf54Q6X4T0 127 aa7.01□□□□□ -1.29
TDP1-204ENST00000545686 LINC00322Q6ZN03 302 aaPredicted RBP7.01□□□□□ -1.29
TDP1-204ENST00000545686 TEX45Q8NA69 505 aa7.01□□□□□ -1.29
TDP1-204ENST00000545686 GATD1Q8NB37 220 aa7.01□□□□□ -1.29
TDP1-204ENST00000545686 C8orf46Q8TAG6 207 aa7.01□□□□□ -1.29
TDP1-204ENST00000545686 RNASE8Q8TDE3 154 aaKnown RBP7.01□□□□□ -1.29
TDP1-204ENST00000545686 PGLYRP4Q96LB8 373 aa7.01□□□□□ -1.29
TDP1-204ENST00000545686 GPR179Q6PRD1 2367 aa7.01□□□□□ -1.29
TDP1-204ENST00000545686 PLXNB1O43157 2135 aa7.01□□□□□ -1.29
TDP1-204ENST00000545686 NCOR1O75376 2440 aa7.01□□□□□ -1.29
TDP1-204ENST00000545686 SLC25A17O43808 307 aa7.01□□□□□ -1.29
TDP1-204ENST00000545686 HOXB4P17483 251 aaPredicted RBP7.01□□□□□ -1.29
TDP1-204ENST00000545686 FOXA3P55318 350 aaPredicted RBP7.01□□□□□ -1.29
TDP1-204ENST00000545686 MRGPRG-AS1Q2M3A8 158 aa7.01□□□□□ -1.29
TDP1-204ENST00000545686 ASCL5Q7RTU5 278 aa7.01□□□□□ -1.29
TDP1-204ENST00000545686 OR4C5Q8NGB2 326 aa7.01□□□□□ -1.29
TDP1-204ENST00000545686 SCRT2Q9NQ03 307 aa7.01□□□□□ -1.29
TDP1-204ENST00000545686 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP7□□□□□ -1.29
TDP1-204ENST00000545686 A0A1B0GW15 77 aa7□□□□□ -1.29
TDP1-204ENST00000545686 SH2D7A6NKC9 451 aaPredicted RBP7□□□□□ -1.29
TDP1-204ENST00000545686 C17orf100A8MU93 164 aa7□□□□□ -1.29
TDP1-204ENST00000545686 M0R296 226 aa7□□□□□ -1.29
TDP1-204ENST00000545686 IGHV3-48P01763 117 aa7□□□□□ -1.29
TDP1-204ENST00000545686 APOHP02749 345 aaPredicted RBP7□□□□□ -1.29
TDP1-204ENST00000545686 SRSF6Q13247 344 aaKnown RBP7□□□□□ -1.29
TDP1-204ENST00000545686 BVES-AS1Q5T3Y7 98 aa7□□□□□ -1.29
TDP1-204ENST00000545686 ZADH2Q8N4Q0 377 aa7□□□□□ -1.29
TDP1-204ENST00000545686 DEFB125Q8N687 156 aa7□□□□□ -1.29
TDP1-204ENST00000545686 RPH3ALQ9UNE2 315 aa7□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms