RNA–Protein interactions for RNA: ENST00000542641.5

YBX3-213, Transcript of Y-box binding protein 3, humanhuman

TSL 4

Gene YBX3, Length 669 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-213ENST00000542641 CD300CQ08708 224 aa8.86□□□□□ -0.99
YBX3-213ENST00000542641 RAB31Q13636 194 aa8.86□□□□□ -0.99
YBX3-213ENST00000542641 BTNL8Q6UX41 500 aa8.86□□□□□ -0.99
YBX3-213ENST00000542641 UNQ9165/PRO28630Q6UXU0 137 aa8.86□□□□□ -0.99
YBX3-213ENST00000542641 REC114Q7Z4M0 266 aa8.86□□□□□ -0.99
YBX3-213ENST00000542641 WFDC9Q8NEX5 89 aa8.86□□□□□ -0.99
YBX3-213ENST00000542641 OR9G4Q8NGQ1 327 aa8.86□□□□□ -0.99
YBX3-213ENST00000542641 RCC1LQ96I51 464 aaKnown RBP8.86□□□□□ -0.99
YBX3-213ENST00000542641 NEURL2Q9BR09 285 aa8.86□□□□□ -0.99
YBX3-213ENST00000542641 C20orf24Q9BUV8 137 aa8.86□□□□□ -0.99
YBX3-213ENST00000542641 PEMTQ9UBM1 199 aa8.86□□□□□ -0.99
YBX3-213ENST00000542641 FBXL17Q9UF56 701 aa8.86□□□□□ -0.99
YBX3-213ENST00000542641 WDR83OSQ9Y284 106 aa8.86□□□□□ -0.99
YBX3-213ENST00000542641 LSM4Q9Y4Z0 139 aaKnown RBP8.86□□□□□ -0.99
YBX3-213ENST00000542641 IFNA5P01569 189 aa8.85□□□□□ -0.99
YBX3-213ENST00000542641 IL4P05112 153 aa8.85□□□□□ -0.99
YBX3-213ENST00000542641 LORP23490 312 aaPredicted RBP8.85□□□□□ -0.99
YBX3-213ENST00000542641 CAMLGP49069 296 aa8.85□□□□□ -0.99
YBX3-213ENST00000542641 OR2F1Q13607 317 aa8.85□□□□□ -0.99
YBX3-213ENST00000542641 PRR31Q5SQ13 230 aa8.85□□□□□ -0.99
YBX3-213ENST00000542641 CYP2G1PQ6ZSU1 146 aa8.85□□□□□ -0.99
YBX3-213ENST00000542641 OR51G1Q8NGK1 321 aa8.85□□□□□ -0.99
YBX3-213ENST00000542641 TMEM190Q8WZ59 177 aa8.85□□□□□ -0.99
YBX3-213ENST00000542641 ZNF414Q96IQ9 312 aa8.85□□□□□ -0.99
YBX3-213ENST00000542641 MGST2Q99735 147 aa8.85□□□□□ -0.99
YBX3-213ENST00000542641 ELOVL1Q9BW60 279 aa8.85□□□□□ -0.99
YBX3-213ENST00000542641 WFDC1Q9HC57 220 aa8.85□□□□□ -0.99
YBX3-213ENST00000542641 UFC1Q9Y3C8 167 aa8.85□□□□□ -0.99
YBX3-213ENST00000542641 AGPAT2O15120 278 aa8.84□□□□□ -0.99
YBX3-213ENST00000542641 ZNF207O43670 478 aaKnown RBP8.84□□□□□ -0.99
YBX3-213ENST00000542641 PFDN1O60925 122 aa8.84□□□□□ -0.99
YBX3-213ENST00000542641 MPDU1O75352 247 aa8.84□□□□□ -0.99
YBX3-213ENST00000542641 CFDP00746 253 aaPredicted RBP8.84□□□□□ -0.99
YBX3-213ENST00000542641 GATA2P23769 480 aaPredicted RBP8.84□□□□□ -0.99
YBX3-213ENST00000542641 EIF2B2P49770 351 aaKnown RBP8.84□□□□□ -0.99
YBX3-213ENST00000542641 ELLP55199 621 aaPredicted RBP8.84□□□□□ -0.99
YBX3-213ENST00000542641 SELENOTP62341 195 aa8.84□□□□□ -0.99
YBX3-213ENST00000542641 ZFP69Q49AA0 526 aa8.84□□□□□ -0.99
YBX3-213ENST00000542641 TM4SF20Q53R12 229 aa8.84□□□□□ -0.99
YBX3-213ENST00000542641 TMEM182Q6ZP80 229 aaPredicted RBP8.84□□□□□ -0.99
YBX3-213ENST00000542641 BPIFCQ8NFQ6 507 aa8.84□□□□□ -0.99
YBX3-213ENST00000542641 SCGB1C1Q8TD33 95 aa8.84□□□□□ -0.99
YBX3-213ENST00000542641 HYLS1Q96M11 299 aa8.84□□□□□ -0.99
YBX3-213ENST00000542641 GINS3Q9BRX5 216 aa8.84□□□□□ -0.99
YBX3-213ENST00000542641 PBDC1Q9BVG4 233 aa8.84□□□□□ -0.99
YBX3-213ENST00000542641 WDR61Q9GZS3 305 aaKnown RBP8.84□□□□□ -0.99
YBX3-213ENST00000542641 DAZ1Q9NQZ3 744 aaKnown RBP8.84□□□□□ -0.99
YBX3-213ENST00000542641 DNHD1Q96M86 4753 aa8.83□□□□□ -1
YBX3-213ENST00000542641 A0A0D9SG52 128 aa8.83□□□□□ -1
YBX3-213ENST00000542641 WI2-2373I1.2A0A1W2PRP0 233 aa8.83□□□□□ -1
YBX3-213ENST00000542641 TMEM213A2RRL7 107 aa8.83□□□□□ -1
YBX3-213ENST00000542641 A8MWP6 167 aa8.83□□□□□ -1
YBX3-213ENST00000542641 SEC14L6B5MCN3 397 aa8.83□□□□□ -1
YBX3-213ENST00000542641 K7EMT4 169 aa8.83□□□□□ -1
YBX3-213ENST00000542641 LYZP61626 148 aa8.83□□□□□ -1
YBX3-213ENST00000542641 ZNF266Q14584 549 aa8.83□□□□□ -1
YBX3-213ENST00000542641 ZNF345Q14585 488 aa8.83□□□□□ -1
YBX3-213ENST00000542641 KCNRGQ8N5I3 272 aa8.83□□□□□ -1
YBX3-213ENST00000542641 ZNF709Q8N972 641 aa8.83□□□□□ -1
YBX3-213ENST00000542641 RNF125Q96EQ8 232 aa8.83□□□□□ -1
YBX3-213ENST00000542641 MCRIP2Q9BUT9 160 aaKnown RBP8.83□□□□□ -1
YBX3-213ENST00000542641 SLC45A2Q9UMX9 530 aa8.83□□□□□ -1
YBX3-213ENST00000542641 VWFP04275 2813 aa8.83□□□□□ -1
YBX3-213ENST00000542641 WNK1Q9H4A3 2382 aa8.83□□□□□ -1
YBX3-213ENST00000542641 BORCS7-ASMTA0A0B4J1R7 106 aa8.82□□□□□ -1
YBX3-213ENST00000542641 C2orf70A6NJV1 201 aa8.82□□□□□ -1
YBX3-213ENST00000542641 TAAR5O14804 337 aa8.82□□□□□ -1
YBX3-213ENST00000542641 SAP30O75446 220 aa8.82□□□□□ -1
YBX3-213ENST00000542641 CSN3P07498 182 aa8.82□□□□□ -1
YBX3-213ENST00000542641 LINC00869P0C866 280 aa8.82□□□□□ -1
YBX3-213ENST00000542641 FOLR2P14207 255 aa8.82□□□□□ -1
YBX3-213ENST00000542641 IGLL1P15814 213 aa8.82□□□□□ -1
YBX3-213ENST00000542641 ORM2P19652 201 aa8.82□□□□□ -1
YBX3-213ENST00000542641 CXCL2P19875 107 aa8.82□□□□□ -1
YBX3-213ENST00000542641 CBLN1P23435 193 aa8.82□□□□□ -1
YBX3-213ENST00000542641 NPPCP23582 126 aa8.82□□□□□ -1
YBX3-213ENST00000542641 USF2Q15853 346 aaPredicted RBP8.82□□□□□ -1
YBX3-213ENST00000542641 MIC13Q5XKP0 118 aa8.82□□□□□ -1
YBX3-213ENST00000542641 IL34Q6ZMJ4 242 aa8.82□□□□□ -1
YBX3-213ENST00000542641 METTL26Q96S19 204 aa8.82□□□□□ -1
YBX3-213ENST00000542641 GGTLC1Q9BX51 225 aa8.82□□□□□ -1
YBX3-213ENST00000542641 NPCDR1Q9BY65 106 aa8.82□□□□□ -1
YBX3-213ENST00000542641 MRPL27Q9P0M9 148 aaKnown RBP8.82□□□□□ -1
YBX3-213ENST00000542641 IGHV3-49A0A0A0MS15 119 aa8.81□□□□□ -1
YBX3-213ENST00000542641 IGHV7-4-1A0A0J9YVY3 117 aa8.81□□□□□ -1
YBX3-213ENST00000542641 C17orf112F2Z3M2 114 aa8.81□□□□□ -1
YBX3-213ENST00000542641 EDN2P20800 178 aa8.81□□□□□ -1
YBX3-213ENST00000542641 RPL29P47914 159 aaKnown RBP8.81□□□□□ -1
YBX3-213ENST00000542641 OPCMLQ14982 345 aa8.81□□□□□ -1
YBX3-213ENST00000542641 LGALSLQ3ZCW2 172 aaPredicted RBP8.81□□□□□ -1
YBX3-213ENST00000542641 C9orf66Q5T8R8 295 aa8.81□□□□□ -1
YBX3-213ENST00000542641 RPL7L1Q6DKI1 246 aaKnown RBP8.81□□□□□ -1
YBX3-213ENST00000542641 Q6ZRG5 221 aa8.81□□□□□ -1
YBX3-213ENST00000542641 STPG3Q8N7X2 389 aa8.81□□□□□ -1
YBX3-213ENST00000542641 OR1B1Q8NGR6 318 aa8.81□□□□□ -1
YBX3-213ENST00000542641 MARC2Q969Z3 335 aa8.81□□□□□ -1
YBX3-213ENST00000542641 NARS2Q96I59 477 aaKnown RBP8.81□□□□□ -1
YBX3-213ENST00000542641 ARPC5LQ9BPX5 153 aa8.81□□□□□ -1
YBX3-213ENST00000542641 PARD6GQ9BYG4 376 aaPredicted RBP8.81□□□□□ -1
YBX3-213ENST00000542641 ARL6Q9H0F7 186 aa8.81□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 109.1 ms