RNA–Protein interactions for RNA: ENST00000540963.1

CHFR-218, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 2

Gene CHFR, Length 875 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-218ENST00000540963 BUB3O43684 328 aa19.08■□□□□ 0.64
CHFR-218ENST00000540963 C15orf40Q8WUR7 153 aa19.08■□□□□ 0.64
CHFR-218ENST00000540963 RRNAD1Q96FB5 475 aaKnown RBP19.08■□□□□ 0.64
CHFR-218ENST00000540963 COPZ2Q9P299 210 aa19.08■□□□□ 0.64
CHFR-218ENST00000540963 CDS2O95674 445 aa19.07■□□□□ 0.64
CHFR-218ENST00000540963 OR10J1P30954 320 aa19.07■□□□□ 0.64
CHFR-218ENST00000540963 FAM3BP58499 235 aaPredicted RBP19.07■□□□□ 0.64
CHFR-218ENST00000540963 SPCS3P61009 180 aa19.07■□□□□ 0.64
CHFR-218ENST00000540963 DHODHQ02127 395 aa19.07■□□□□ 0.64
CHFR-218ENST00000540963 PRSS54Q6PEW0 395 aa19.07■□□□□ 0.64
CHFR-218ENST00000540963 SIGLEC15Q6ZMC9 328 aa19.07■□□□□ 0.64
CHFR-218ENST00000540963 OR52E5Q8NH55 327 aa19.07■□□□□ 0.64
CHFR-218ENST00000540963 RNASEH2CQ8TDP1 164 aaKnown RBP19.07■□□□□ 0.64
CHFR-218ENST00000540963 SOSTQ9BQB4 213 aa19.07■□□□□ 0.64
CHFR-218ENST00000540963 PLA2G2EQ9NZK7 142 aa19.07■□□□□ 0.64
CHFR-218ENST00000540963 GPR132Q9UNW8 380 aa19.07■□□□□ 0.64
CHFR-218ENST00000540963 B3GALNT1O75752 331 aa19.06■□□□□ 0.64
CHFR-218ENST00000540963 CDK2AP2O75956 126 aa19.06■□□□□ 0.64
CHFR-218ENST00000540963 OR5AC1P0C628 307 aa19.06■□□□□ 0.64
CHFR-218ENST00000540963 RND2P52198 227 aa19.06■□□□□ 0.64
CHFR-218ENST00000540963 SSBP1Q04837 148 aaKnown RBP19.06■□□□□ 0.64
CHFR-218ENST00000540963 USF2Q15853 346 aaPredicted RBP19.06■□□□□ 0.64
CHFR-218ENST00000540963 FAM219AQ8IW50 185 aa19.06■□□□□ 0.64
CHFR-218ENST00000540963 OR4C16Q8NGL9 310 aa19.06■□□□□ 0.64
CHFR-218ENST00000540963 TMEM222Q9H0R3 208 aa19.06■□□□□ 0.64
CHFR-218ENST00000540963 CTDSPLO15194 276 aa19.05■□□□□ 0.64
CHFR-218ENST00000540963 IL4P05112 153 aa19.05■□□□□ 0.64
CHFR-218ENST00000540963 EMP1P54849 157 aa19.05■□□□□ 0.64
CHFR-218ENST00000540963 MRPS10P82664 201 aaKnown RBP19.05■□□□□ 0.64
CHFR-218ENST00000540963 TRIM16LQ309B1 348 aa19.05■□□□□ 0.64
CHFR-218ENST00000540963 C2orf83Q53S99 150 aa19.05■□□□□ 0.64
CHFR-218ENST00000540963 SELENOHQ8IZQ5 122 aaKnown RBP19.05■□□□□ 0.64
CHFR-218ENST00000540963 SLIRPQ9GZT3 109 aaKnown RBP19.05■□□□□ 0.64
CHFR-218ENST00000540963 NUP62P37198 522 aaPredicted RBP19.04■□□□□ 0.64
CHFR-218ENST00000540963 FAM222AQ5U5X8 452 aa19.04■□□□□ 0.64
CHFR-218ENST00000540963 ETFRF1Q6IPR1 90 aa19.04■□□□□ 0.64
CHFR-218ENST00000540963 CCDC71LQ8N9Z2 235 aa19.04■□□□□ 0.64
CHFR-218ENST00000540963 DIRAS2Q96HU8 199 aa19.04■□□□□ 0.64
CHFR-218ENST00000540963 CCDC59Q9P031 241 aaKnown RBP19.04■□□□□ 0.64
CHFR-218ENST00000540963 TEX13DA0A0J9YY54 714 aaPredicted RBP19.03■□□□□ 0.64
CHFR-218ENST00000540963 TMBIM6P55061 237 aa19.03■□□□□ 0.64
CHFR-218ENST00000540963 RAB2BQ8WUD1 216 aa19.03■□□□□ 0.64
CHFR-218ENST00000540963 GPR146Q96CH1 333 aa19.03■□□□□ 0.64
CHFR-218ENST00000540963 NAA60Q9H7X0 242 aa19.03■□□□□ 0.64
CHFR-218ENST00000540963 CTNNBIP1Q9NSA3 81 aaPredicted RBP19.03■□□□□ 0.64
CHFR-218ENST00000540963 TOMM40O96008 361 aa19.02■□□□□ 0.64
CHFR-218ENST00000540963 MEF2DQ14814 521 aa19.02■□□□□ 0.64
CHFR-218ENST00000540963 SPATA31B1PQ5VZV4 182 aa19.02■□□□□ 0.64
CHFR-218ENST00000540963 RNASE11Q8TAA1 199 aaKnown RBP19.02■□□□□ 0.64
CHFR-218ENST00000540963 TMEM170AQ8WVE7 144 aa19.02■□□□□ 0.64
CHFR-218ENST00000540963 SAV1Q9H4B6 383 aaPredicted RBP19.02■□□□□ 0.64
CHFR-218ENST00000540963 CRYM-AS1A6NIL9 109 aa19.01■□□□□ 0.63
CHFR-218ENST00000540963 AKAIN1P0CW23 69 aa19.01■□□□□ 0.63
CHFR-218ENST00000540963 RD3LP0DJH9 198 aa19.01■□□□□ 0.63
CHFR-218ENST00000540963 IL18Q14116 193 aa19.01■□□□□ 0.63
CHFR-218ENST00000540963 SURF2Q15527 256 aaPredicted RBP19.01■□□□□ 0.63
CHFR-218ENST00000540963 FOXI2Q6ZQN5 318 aa19.01■□□□□ 0.63
CHFR-218ENST00000540963 OR51S1Q8NGJ8 323 aa19.01■□□□□ 0.63
CHFR-218ENST00000540963 HEYLQ9NQ87 328 aaPredicted RBP19.01■□□□□ 0.63
CHFR-218ENST00000540963 PRR13Q9NZ81 148 aa19.01■□□□□ 0.63
CHFR-218ENST00000540963 PFDN2Q9UHV9 154 aa19.01■□□□□ 0.63
CHFR-218ENST00000540963 IGHV3OR16-12A0A075B7B8 117 aa19■□□□□ 0.63
CHFR-218ENST00000540963 ANKRD20A5PA0PJZ0 165 aa19■□□□□ 0.63
CHFR-218ENST00000540963 H3BMQ9 156 aa19■□□□□ 0.63
CHFR-218ENST00000540963 GDF5OSQ5U4N7 250 aa19■□□□□ 0.63
CHFR-218ENST00000540963 NOXA1Q86UR1 476 aa19■□□□□ 0.63
CHFR-218ENST00000540963 ZNF709Q8N972 641 aa19■□□□□ 0.63
CHFR-218ENST00000540963 C15orf53Q8NAA6 179 aa19■□□□□ 0.63
CHFR-218ENST00000540963 SLC24A4Q8NFF2 622 aa19■□□□□ 0.63
CHFR-218ENST00000540963 BCL7BQ9BQE9 202 aa19■□□□□ 0.63
CHFR-218ENST00000540963 DISC1C4P0D8 188 aa18.99■□□□□ 0.63
CHFR-218ENST00000540963 TNFSF8P32971 234 aa18.99■□□□□ 0.63
CHFR-218ENST00000540963 ID1P41134 155 aa18.99■□□□□ 0.63
CHFR-218ENST00000540963 RBPMSQ93062 196 aaKnown RBP18.99■□□□□ 0.63
CHFR-218ENST00000540963 CACFD1Q9UGQ2 172 aa18.99■□□□□ 0.63
CHFR-218ENST00000540963 GOLT1BQ9Y3E0 138 aa18.99■□□□□ 0.63
CHFR-218ENST00000540963 TMEM56-RWDD3S4R434 201 aa18.99■□□□□ 0.63
CHFR-218ENST00000540963 C16orf90A8MZG2 172 aa18.98■□□□□ 0.63
CHFR-218ENST00000540963 HBE1P02100 147 aa18.98■□□□□ 0.63
CHFR-218ENST00000540963 PSMB3P49720 205 aa18.98■□□□□ 0.63
CHFR-218ENST00000540963 NPIPB3Q92617 1050 aa18.98■□□□□ 0.63
CHFR-218ENST00000540963 C14orf166Q9Y224 244 aaKnown RBP18.98■□□□□ 0.63
CHFR-218ENST00000540963 TMED3Q9Y3Q3 217 aa18.98■□□□□ 0.63
CHFR-218ENST00000540963 HTN3P15516 51 aa18.97■□□□□ 0.63
CHFR-218ENST00000540963 ZNF79Q15937 498 aa18.97■□□□□ 0.63
CHFR-218ENST00000540963 OR8G2PQ6IF36 304 aa18.97■□□□□ 0.63
CHFR-218ENST00000540963 TMEM88Q6PEY1 159 aa18.97■□□□□ 0.63
CHFR-218ENST00000540963 CACNG5Q9UF02 275 aa18.97■□□□□ 0.63
CHFR-218ENST00000540963 YTHDF2Q9Y5A9 579 aaKnown RBP18.97■□□□□ 0.63
CHFR-218ENST00000540963 IGKV3-20P01619 116 aa18.96■□□□□ 0.63
CHFR-218ENST00000540963 PSG1P11464 419 aa18.96■□□□□ 0.63
CHFR-218ENST00000540963 FXYD7P58549 80 aa18.96■□□□□ 0.63
CHFR-218ENST00000540963 SUPT4H1P63272 117 aaKnown RBP18.96■□□□□ 0.63
CHFR-218ENST00000540963 TMEM268Q5VZI3 342 aa18.96■□□□□ 0.63
CHFR-218ENST00000540963 OR51G1Q8NGK1 321 aa18.96■□□□□ 0.63
CHFR-218ENST00000540963 LOC102723971A0A1B0GUV8 181 aa18.95■□□□□ 0.62
CHFR-218ENST00000540963 NXPH3O95157 252 aa18.95■□□□□ 0.62
CHFR-218ENST00000540963 PAX9P55771 341 aa18.95■□□□□ 0.62
CHFR-218ENST00000540963 RNF125Q96EQ8 232 aa18.95■□□□□ 0.62
CHFR-218ENST00000540963 LINC00052Q96N35 136 aa18.95■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 57.6 ms